ID KC513822; SV 1; circular; genomic DNA; STD; VRL; 2739 BP. XX AC KC513822; XX DT 30-APR-2013 (Rel. 116, Created) DT 14-APR-2016 (Rel. 128, Last updated, Version 2) XX DE Tomato leaf curl New Delhi virus-India isolate Lucknow segment DNA-A, DE complete sequence. XX KW . XX OS Tomato leaf curl New Delhi virus-India OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2739 RA Srivastava A., Kumar S., Jaidi M., Raj S.K., Shukla S.K.; RT "First Report of Tomato leaf curl New Delhi virus on Opium Poppy (Papaver RT somniferum) in India"; RL Plant Dis. 100(1):232-232(2016). XX RN [2] RP 1-2739 RA Srivastava A., Raj s.K.; RT ; RL Submitted (19-JAN-2013) to the INSDC. RL Plant Molecular Virology, CSIR-National Botanical Research Institute, RL Lucknow-226001, Rana Pratap Marg, Lucknow, U. P. 226001, India XX DR MD5; fd295fbf004db024235d1710a3f1f383. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2739 FT /organism="Tomato leaf curl New Delhi virus-India" FT /segment="DNA-A" FT /host="Papaver somniferum (poppy)" FT /isolate="Lucknow" FT /mol_type="genomic DNA" FT /country="India" FT /collected_by="Ashish Srivastava" FT /collection_date="Feb-2012" FT /clone="AS-Poppy 1" FT /proviral FT /db_xref="taxon:1000682" FT gene 120..458 FT /gene="AV2" FT CDS 120..458 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:M9ZBX2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:M9ZBX2" FT /protein_id="AGK29960.1" FT /translation="MWDPLLHEFPESVHGLRCMLAVKYLQEIEKNYSPDTVGYDLVRDL FT ILVLRAKNYGEATSRYHHFNARIEGTPTSQLRQPLWSSCSCPHCPRHKSKGLDQQADEQ FT KTQNVQNV" FT gene 280..1050 FT /gene="AV1" FT CDS 280..1050 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:M9ZA30" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:M9ZA30" FT /protein_id="AGK29961.1" FT /translation="MAKRPADIIISTPASKVRRRLNFDSPYGARAVVPIARVTKAKAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTGSPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGTYASREQALVRKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1047..1457) FT /gene="AC3" FT CDS complement(1047..1457) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:M9Z6H3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:M9Z6H3" FT /protein_id="AGK29962.1" FT /translation="MITDSRTGEYITADRTESGVYTWEIRNPLYFKILKHDSRPFLTQH FT DIIKIQIQFNHNLRKALGLHKCFLTFKIWTGLRPQIGIFLRVFKTQVLKYLDMLGVIGI FT NNVIRAVYHVLDNVLERTIDVQTSYDIKLDIY" FT gene complement(1177..1596) FT /gene="AC2" FT CDS complement(1177..1596) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:M9Z5E9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:M9Z5E9" FT /protein_id="AGK29963.1" FT /translation="MQSSSHSKNHSIPVAKTSLPQKKKKSIRRRRVDLPCGCSYYISIN FT CHDHGFTHRGVHHCGSYREWRVYLGNSKSPVFQNFETRQQALPNTARHHQDSNTVQPQP FT AESPGTSQVFSNFQNLDGLTPSDWDFLESLQNPGP" FT gene complement(1499..2584) FT /gene="AC1" FT CDS complement(1499..2584) FT /codon_start=1 FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:M9Z355" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:M9Z355" FT /protein_id="AGK29964.1" FT /translation="MAPPRRFRIDAKNYFLTYPKCSLTKEEALSQLQTLETPTAKKFIK FT ICRELHEDGSPHIHVLIQFEGKFQCKNNRFFDLVSPSRSAHFHPNIQGAKSASDVKAYI FT DKDGDVLEWGVFQIDGRSARGGQQTANDAYAKAINTGNKEDALKVLKELAPKDYVLQFH FT NLISNLDRIFQPRSEVYVSPFSISSFDRVPPELVHWASVNVVCAAARPFRPISIVIEGD FT SRTGKTMWARCLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVMIKGGIPTIFLCNKGPNSSYKEYLDEEKNAALKQWAIKNAVFITLEEPL FT YSGRENIAPAEEEEEHSQEAS" FT gene complement(2251..2427) FT /gene="AC4" FT CDS complement(2251..2427) FT /codon_start=1 FT /gene="AC4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:M9ZBX7" FT /protein_id="AGK29965.1" FT /translation="MGLRISMFSSNSKGNSSAKITDSSTWFPQVGQHISIRTFRELNQR FT QMSKHTSTKTETF" XX SQ Sequence 2739 BP; 745 A; 598 C; 612 G; 784 T; 0 other; accgaatggc cgcgcaaatt tttaggtggg ccctcaacca atgaaattca cgctacatgg 60 cttatttagt gcgcggggac caataaatag acttcctcac caagtttgga tccacaaaca 120 tgtgggatcc attattgcac gaatttccag aaagcgttca tggtctaagg tgcatgctag 180 ctgtaaaata tctccaagag atagagaaga actattcccc agacacagtc ggctacgatc 240 ttgtccgaga tctcattctt gttctccgag caaagaacta tggcgaagcg accagcagat 300 atcatcattt caacgcccgc atcgaaggta cgccgacgtc tcaacttcga cagcccctat 360 ggagctcgtg cagttgtccc cattgcccgc gtcacaaaag caaaggcctg gaccaacagg 420 ccgatgaaca gaaaacccag aatgtacaga atgtatagga gtcccgacgt gccaaggggc 480 tgtgaaggcc cttgtaaggt gcagtctttt gaatctaggc acgatgtctc tcatattggc 540 aaagtcatgt gtgttagtga tgttactcga ggaactggac tcacacatcg cgtagggaag 600 cgattttgtg tgaaatctgt ctatgtgctg gggaagatat ggatggatga aaacatcaag 660 acaaaaaacc atactaacag tgtcatgttt tttttggttc gtgaccgacg tcctacaggt 720 tcccctcaag attttgggga agtttttaac atgtttgaca atgaaccgag cacagcaacg 780 gtgaagaaca tgcatcgtga tcgttatcaa gtcttacgga aatggcatgc gactgtgacg 840 ggaggaacat atgcatctag ggagcaagca ttagttagga agtttgttag ggttaataat 900 tatgtagttt acaatcaaca agaggccggc aagtatgaga atcatactga aaatgcatta 960 atgttgtata tggcctgtac tcatgcatca aatcctgtat atgctacttt gaaaatccgg 1020 atctatttct atgattcggt aacaaattaa taaatatcaa gttttatatc atatgaagtc 1080 tgtacatcaa ttgttcgctc caatacatta tccaaaacat gataaactgc tcttattaca 1140 ttattaattc ctattacacc aagcatatcc aggtacttaa ggacctgggt tttgaagact 1200 ctcaagaaaa tcccaatctg agggcgtaag cccgtccaga ttttgaaagt tagaaaacac 1260 ttgtgaagtc ccagggcttt ccgcaggttg tggttgaact gtatttgaat cttgatgatg 1320 tcgtgctgtg ttaggaaggg cctgctgtcg tgtttcaaaa ttttgaaata caggggattt 1380 cgaatttccc aggtatacac gccactctct gtacgatccg cagtgatgta ctcccctgtg 1440 cgtgaatccg tgatcatggc agttgatcga tatgtaatac gaacacccac acggcagatc 1500 aactcgcctc ctgcgaatgc tcttcttctt cttctgcggg agcgatgttt tcgcgaccgg 1560 aatagagtgg ttcttcgagt gtgatgaaga ctgcattctt gattgcccac tgcttcagtg 1620 ctgcattttt ctcttcgtcc agatattcct tatagctgct gtttggacct ttattgcaca 1680 ggaagatagt gggaattcct cctttaatca tgactggctt tccgtacttc gtgttgcttt 1740 gccagtcacg ctgggccccc atgaattctt taaagtgctt tagatagtgg ggatcaacgt 1800 catcaatgac gttgtaccag gcatcattgc tatacacctt tgggctcaga tcaagatgtc 1860 cacacaagta attgtgtggt cccaagcaac gagcccacat tgttttgccc gttctactat 1920 ccccctcaat gactatgctt atgggcctaa aaggccgcgc agcggcacac acaacattca 1980 cactggccca atggacaagt tctggaggaa ctctgtcgaa ggaagaaatt gaaaatggag 2040 aaacgtaaac ctcagaacga ggttggaaaa tgcgatccaa attgctaatt aaattatgaa 2100 actgcagaac ataatccttt ggggctaatt cctttaatac tttcaatgca tcttctttat 2160 tccccgtgtt aatcgcctta gcatatgcat cgttggccgt ctgctgacca ccacgagcag 2220 atcgtccatc gatctggaaa acaccccatt ctagaacgtc tccgtctttg tcgatgtatg 2280 ctttgacatc tgacgctgat ttagctccct gaatgttcgg atggaaatgt gctgaccgac 2340 ttggggaaac caagtcgaag aatctgttat ttttgcactg gaatttccct tcgaattgga 2400 tgagaacatg gatatgcgga gacccatcct cgtgcagctc tctacagatc ttgatgaatt 2460 tcttcgcagt cggggtttct agggtttgta attgggaaag tgcctcttct ttagttagag 2520 agcactttgg atatgtgagg aaatagtttt tggcatctat tctgaaacga cgtggcggag 2580 ccataaaact tgtcgttttg attcggcgtc cctcaacttc ctctatgtaa ttggcgtctg 2640 gcgtcccata tataggtagg acgctaaatg gcagaattgt aattttgaaa agaaaattac 2700 tttaattcaa aaccctcata gcggccattc gttaatatt 2739 //