Dbfetch

Dbfetch

ID   KC477159; SV 1; linear; genomic RNA; STD; VRL; 942 BP.
XX
AC   KC477159;
XX
DT   15-MAY-2013 (Rel. 116, Created)
DT   27-SEP-2014 (Rel. 122, Last updated, Version 2)
XX
DE   Grapevine leafroll-associated virus 3 isolate NX-12 coat protein gene,
DE   complete cds.
XX
KW   .
XX
OS   Grapevine leafroll-associated virus 3
OC   Viruses; Riboviria; Closteroviridae; Ampelovirus.
XX
RN   [1]
RP   1-942
RX   DOI; .1094/PDIS-01-13-0048-RE.
RX   PUBMED; 30722147.
RA   Liu M., Li M., Qi H., Guo R., Liu X., Wang Q., Cheng Y.;
RT   "Occurrence of Grapevine Leafroll-Associated Viruses in China";
RL   Plant Dis. 97(10):1339-1345(2013).
XX
RN   [2]
RP   1-942
RA   Liu M., Li M., Qi H., Cheng Y.;
RT   ;
RL   Submitted (03-JAN-2013) to the INSDC.
RL   Department of Pomology, China Agricultural University, No. 2 Yuanmingyuan
RL   West Road, Haidian District, Beijing, Beijing 100193, China
XX
DR   MD5; d970ec7c4be732210d823329d5e7c396.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..942
FT                   /organism="Grapevine leafroll-associated virus 3"
FT                   /host="grape; cultivar: Carmenere"
FT                   /isolate="NX-12"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="18-Sep-2009"
FT                   /db_xref="taxon:55951"
FT   CDS             1..942
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q45QZ2"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:Q45QZ2"
FT                   /protein_id="AGG08752.1"
FT                   /translation="MAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQ
FT                   AELTGIAVVPEKYVFATAALATAAQEPPRQPPAQVVEPQETDIGVVPESETLTPNKLVF
FT                   EKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINAALMELCKKVMGADD
FT                   AATKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYE
FT                   NPVRQYLAYFTPTFITATLNGKLVMNEKVMAQHGVPPKFFPYTIDCVRPTYDLFNNDAI
FT                   LAWNLARQQAFRNKTVTADNTLHNVFQLLQKK"
XX
SQ   Sequence 942 BP; 297 A; 189 C; 246 G; 210 T; 0 other;
     atggcatttg aactgaaatt agggcagata tatgaagtcg tccccgaaaa taatttgaga        60
     gttagagtag gggatgcggc acaaggaaaa tttagtaagg cgagtttctt aaagtacgtt       120
     aaggacggga cacaggcgga attaacggga atcgccgtag tgcccgaaaa atacgtattc       180
     gccacagcag ctttggctac agcggcgcag gagccaccta ggcagccacc agcgcaagtg       240
     gtggaaccac aggaaaccga tataggggta gtgccggaat ctgagactct cacaccaaat       300
     aagttggttt tcgagaaaga tccagacaag ttcttgaaga ctatgggcaa gggaatagct       360
     ttggacttga cgggagttac ccacaaaccg aaagttatta acgagccagg gaaagtatca       420
     gtagaggtgg caatgaagat taatgctgca ttgatggagc tgtgtaagaa ggttatgggc       480
     gccgatgacg cagcaactaa gacaaaattc ttcttgtacg tgatgcagat tgcttgcacg       540
     ttctttacat cgtcttcgac ggagttcaaa gagtttgact acatagaaac cgatgatgga       600
     aagaagatat atgcggtgtg ggtatatgat tgcattaaac aagctgctgc ttcgacgggt       660
     tatgaaaacc cggtaaggca gtatctagcg tacttcacac caaccttcat cacggcgacc       720
     ctgaatggta aactagtgat gaacgagaag gttatggcac agcatggagt accaccgaaa       780
     ttctttccgt acacgataga ctgcgttcgt ccgacgtacg atctgttcaa caacgacgca       840
     atactagcat ggaatttagc tagacagcag gcgtttagaa acaagacggt aacggccgat       900
     aacaccttac acaacgtctt ccaactattg caaaagaagt ag                          942
//