ID KC462553; SV 1; circular; genomic DNA; STD; VRL; 2760 BP. XX AC KC462553; XX DT 15-APR-2013 (Rel. 116, Created) DT 11-JUL-2014 (Rel. 121, Last updated, Version 2) XX DE Watermelon chlorotic stunt virus isolate PAL segment DNA-B, complete DE sequence. XX KW . XX OS Watermelon chlorotic stunt virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2760 RX DOI; 10.3390/v6062444. RX PUBMED; 24956181. RA Ali-Shtayeh M.S., Jamous R.M., Mallah O.B., Abu-Zeitoun S.Y.; RT "Molecular characterization of watermelon chlorotic stunt virus (WmCSV) RT from Palestine"; RL Viruses 6(6):2444-2462(2014). XX RN [2] RP 1-2760 RA Ali-Shtayeh M.S., Jamous R.M.; RT "Squash leaf curl virus (SLCV): a serious disease threatening cucubits RT production in Palestine"; RL Unpublished. XX RN [3] RP 1-2760 RA Ali-Shtayeh M.S., Jamous R.M.; RT ; RL Submitted (08-JAN-2013) to the INSDC. RL Biodiversity and Biotechnology research Unit, Biodiversity & Environmental RL Research Center, BERC, Al-Masjed Str, Nablus 970, Palestinian Authority XX DR MD5; 0aee193d4ed27ab4b9347f699c4c4c3f. XX CC GenBank Accession Numbers KC462552, KC462553 represent sequences CC from the 2 segments of Watermelon chlorotic stunt virus. CC ##Assembly-Data-START## CC Assembly Method :: CLC Main Workbench 6 v. 6.6.2 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2760 FT /organism="Watermelon chlorotic stunt virus" FT /segment="DNA-B" FT /host="watermelon" FT /isolate="PAL" FT /mol_type="genomic DNA" FT /isolation_source="Palestine" FT /collection_date="Jun-2010" FT /db_xref="taxon:35341" FT CDS 522..1286 FT /codon_start=1 FT /product="BV1" FT /db_xref="GOA:M9SY90" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:M9SY90" FT /protein_id="AGI95938.1" FT /translation="MPVIRRYDGTPHCTRGRKRKQFFRPFKSGLFRRRQASRRLFAEKP FT RDKLSRRCLEDVHSGPSYALMNQCDVTSYVTYPILGLEGNGGRSSDFIKLMNVRVSGTI FT NVTPLPAEPMSDRSPMNGIFVLLLIVDRKPFVPEGVNVLPSFKELFGEYECVYGIPRVK FT ENQRHRYRILGMWKQYVSGDDSAVQKDFTLRRNLSGPRYNVWAAFKDIDQMSTGGNYKN FT VSKNAILACNIWVSTVRSKCEVYSQFVLDYVG" FT CDS complement(1326..2321) FT /codon_start=1 FT /product="BC1" FT /db_xref="GOA:M9SYW0" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:M9SYW0" FT /protein_id="AGI95939.1" FT /translation="MIIYCVQSYLHLKIELRRKVPVENGMEGAYTVTNKYIHTKRTEYT FT LTTDATPITLQFPSSIEQTRVRLLGRCMKIDHIIIEYRNQVPFNATGSVIIEIRDNRIS FT DEEAAQAAFTFPIACNVDLHYFSSSFFSVAEQCPWEIVYRVEDSNVLNGVRFASFKAKL FT RLSSARHSTDIMFKAPTIKILTKGYKEDCIDFWSVERGETRRRLLNPTPSAQSNRALSK FT RPITILPGETWATKSHVGLPSASDSQSRDTYRSQSMRLDHTRSFTGTSYESDDTPYAGL FT HRLQTATLDPGDSVSQTRSENFTRQDLESILENTINKCLIKNKSDNNQML" XX SQ Sequence 2760 BP; 698 A; 593 C; 690 G; 779 T; 0 other; accggatggc cgccggatcc cctttgtgcg gaccccaccg agtctctaaa tggcattttg 60 gtcatttcca tgtctttata tggttttttt gtaatttatg tgaagttaaa aagagggaac 120 accgcactat cactctattg gccaatcaaa ttgcatcctg attgttaagg ggataaattt 180 gggcctcggc ccaatttatc gatgtgacgg gacgtacgtc tgctttagaa gattggccca 240 caacgactgc tttgtctgac aggaccacat gggacactga caggtctgtt ctttaacctt 300 aagaaaattc tgggaatttt cccgcctatt tcgcctcgag gagcaaacag tcgttggatg 360 accgccacct gtcacttgtt cgttcgttcg atttccgttt ttcgattaat ttgtggtctc 420 tgtacatgtt ggcctgttat ttatgacagt gtggcgtcca tactgaggtg tccaactggg 480 actgtattcg tattgagagg atatacgtat cctcccaagc tatgccagtg attcgtcgct 540 atgatgggac acctcattgt acgcgtggac gaaagcggaa gcagttcttt cgcccgttca 600 agtctggtct gtttagacgc cgtcaggcgt cgaggcgtct gtttgccgaa aagccacgcg 660 ataaactctc acgccgttgc ctggaggatg ttcacagtgg gccgtcttat gcactgatga 720 atcagtgcga cgtgacatct tatgtgacgt atcctattct tggtctagag ggcaacgggg 780 gacgtagcag tgactttatt aagttgatga acgtgcgcgt ttctggcacg atcaacgtga 840 cccctttgcc tgcagagccc atgtctgatc gttctcctat gaacggtata tttgttctac 900 ttttgatcgt ggacaggaaa ccattcgtac ccgaaggtgt gaacgtattg cccagtttca 960 aggaactgtt cggggagtat gaatgcgtct acggcattcc acgagtgaag gaaaatcagc 1020 gtcataggta taggattttg ggcatgtgga agcaatacgt cagcggtgac gatagtgcgg 1080 tgcagaaaga ctttacattg cgaaggaacc tcagtggtcc gagatacaac gtatgggcag 1140 cattcaaaga cattgatcaa atgtccacag gaggaaatta caagaacgtg agcaagaatg 1200 ccattcttgc ctgtaatata tgggtctcta cagttcgttc gaaatgtgaa gtgtattcgc 1260 aatttgtact ggattatgtg ggctgaaata aaattcaatt ttatttatgc gttcaactat 1320 cgttattaca gcatttgatt attgtcggat ttgttcttaa ttagacactt attaatcgta 1380 ttttctaaaa tagattctag gtcctgtctc gtgaaattct ctgatcttgt ctgggagact 1440 gagtctcccg ggtctagcgt ggctgtttgt agtctgtgca gtcctgcata tggcgtgtcg 1500 tcggactcat atgaggtccc cgtgaaactg cgtgtgtggt ccagtctcat cgactgggat 1560 ctgtacgtgt cgcgactttg agagtccgac gcagaaggca acccaacatg cgactttgtg 1620 gcccaagttt ctccaggtaa tatcgtaatt ggcctctttg acagggcccg attcgattgg 1680 gccgacgggg ttgggttgag cagccttcgt cgtgtttcgc ctcgttcaac ggaccagaag 1740 tctatgcagt cctccttgta accctttgtc aggatcttga tcgtcggagc cttgaacatg 1800 atgtccgttg aatgtcgtgc agaactcagt cgcaacttgg ctttgaaaga agcaaaccgg 1860 acaccgttca atacgttcga gtcctcgacc ctgtacacga tctcccaggg acactgctcg 1920 gcgactgaaa aaaacgacga agagaagtag tgaagatcga cgttgcaagc tatcgggaag 1980 gtgaaggcag cctgtgctgc ttcctcgtcg gagatacggt tgtcccgtat ctcaataatc 2040 acagatcccg ttgcgttaaa cgggacctgg tttctgtact caatgataat gtggtcgatc 2100 ttcatgcatc ttcccagcag acgcaccctt gtctgctcga tcgaactggg aaactgaagg 2160 gttataggag tggcgtctgt agtgagcgta tattccgtcc tcttggtatg tatgtacttg 2220 ttagtgacgg tatacgcgcc ctccattccg ttctccacag gaacctttcg acgaagttca 2280 attttgaggt gcagatagct ctgcacacaa taaattatca ttaacacagg caaagcaaca 2340 agagaacgga gattattcta ttatataaaa taaggccccg caggggaaat actcaaaaca 2400 caccgagaaa ggacgtaatg ggcatactat ggcctaaagg ataattaagc gaaattaatt 2460 gagctggtaa tcgtattggg tgttttggag tatttcatag aatctaattt gtacgggcgt 2520 attaggaact ggtgttcgtc gtggagagaa ctcgaactga attcccaaat agaaaaaacc 2580 ctaatgaccg aacaaataga atggggagat aaaataagga gagagaagct ctttcatgta 2640 cggaactgga gacacctccc agcccttcta tccctgtgaa ttggagactg gagacaatat 2700 atagaagtag tatgatatac tactaggatt ttgacacgta tgcggccatc ctataatatt 2760 //