ID KC441466; SV 1; circular; genomic DNA; STD; VRL; 2611 BP. XX AC KC441466; XX DT 15-APR-2013 (Rel. 116, Created) DT 15-MAY-2014 (Rel. 120, Last updated, Version 4) XX DE Squash leaf curl virus isolate PAL segment DNA-B BV1 and BC1 genes, DE complete cds. XX KW . XX OS Squash leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2611 RX DOI; 10.1007/s11262-013-1012-1. RX PUBMED; 24258392. RA Ali-Shtayeh M.S., Jamous R.M., Hussein E.Y., Mallah O.B., Abu-Zeitoun S.Y.; RT "Squash leaf curl virus (SLCV): a serious disease threatening cucurbits RT production in Palestine"; RL Virus Genes 48(2):320-328(2014). XX RN [2] RP 1-2611 RA Ali-Shtayeh M.S., Jamous R.M.; RT ; RL Submitted (05-JAN-2013) to the INSDC. RL Biodiversity and Biotechnology research Unit, Biodiversity & Environmental RL Research Center, BERC, Al-Masjed Str, Nablus 970, Palestinian Authority XX DR MD5; 98c639e402878e4b68b0cdfa7e1ca6f6. XX CC GenBank Accession Numbers KC441465, KC441466 represent sequences CC from the 2 segments of Squash leaf curl virus isolate PAL. CC ##Assembly-Data-START## CC Assembly Method :: CLC Main Workbench 6 v. 6.6.2 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2611 FT /organism="Squash leaf curl virus" FT /segment="DNA-B" FT /host="squash" FT /isolate="PAL" FT /mol_type="genomic DNA" FT /collection_date="Sep-2010" FT /note="Palestine" FT /db_xref="taxon:10829" FT CDS 532..1284 FT /codon_start=1 FT /product="BV1" FT /db_xref="GOA:M9T6X6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:M9T6X6" FT /protein_id="AGI96973.1" FT /translation="MYSTSNRRGRSQTQRGSHVRRTGVKRSYGAASGYARRRPNVVLNT FT QVEPRMTTQRVQENQFGPEFVLSQNSALSTFVTYPSYVKSVPNRTRTYIKLKRLRFKGT FT LKIERGQGDTIMDGPISNIEGVFSMVIVVDRKPHVSQSGRLHTFDELFGARIHCHGNLS FT VVPALKDRYYIRHVTKRVVSLEKDTLLIDLHGTTHLSNKRYNCWASFSDLERDSCNGVY FT GNITKNALLVYYCWLSDAHSKASNICIV" FT CDS complement(1477..2358) FT /codon_start=1 FT /product="BC1" FT /db_xref="GOA:M9T555" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:M9T555" FT /protein_id="AGI96974.1" FT /translation="MGSQLVPPPSAFNYIESQRDEFQLSHDLTEIVLQFPSTASQITAR FT LSRSCMKIDHCVIEYRQQVPINASGTVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF FT SSSFFSLKDPIPWKLYYRVSDSNVHQMTHFAKFKGKLKLSSAKHSVDIPFRAPTVKILA FT KQFSEKDIDFWHVGYGKWERRLVKSASSSRFGLRGPIEINPGESWATKSLIGPINRNAD FT LDIEEELLPYRELNRLGTNILDPGESASIVGIQRSQSNITMSMSQLNELVRSTVHECIK FT TSCIPSTPKSLS" XX SQ Sequence 2611 BP; 699 A; 546 C; 573 G; 793 T; 0 other; actggatggc cgcccgattt ttggtgtccg cctctttagc ccacggccca ggcccatgtt 60 aagcaaattg ggccgacgtt tggtccgttt aagccgcgcg ccttcttcct ccagggacca 120 cacagcactt tcgaccaatc acgttgttat tgacaaacct atttggtatg gatcgtacga 180 catgtgtgga ccactgtcac atggtgctgt gtcagacgct cgactttaat tcaaattggc 240 aaagtgatta tcttcgtctt taatttgtac tgtcacagag tgttggacca tctctgtgca 300 ctatcgacga tgtccttttg ttctatggac ctcgttctgt caatttgaat taatctttag 360 tgctaccaat tacagtttag ctacagagac tagttattgt tcatggattg gttcttcgtc 420 tattaataat tgaaacgtgt aattggctta tgcgtcgaat tcatatatta gacaacacgt 480 gtattattta cacgtatata cgttgtacag tatctctatc atcgttctta gatgtattcg 540 acgagcaata gacggggtcg atcgcaaact cagcgaggtt ctcatgtacg ccgtacaggt 600 gtcaagcgtt catatggtgc agccagtggt tatgcaaggc gtcgacccaa cgtggtatta 660 aatactcaag ttgaaccaag aatgactaca cagcgtgttc aagagaacca gtttggccca 720 gaatttgtct tgagtcaaaa ctcagcgttg tccacgtttg taacatatcc tagctatgtt 780 aagtctgttc ccaatcgcac aagaacgtat ataaaattga aacgactgcg ttttaaggga 840 actctgaaaa ttgaacgtgg acaaggtgac actattatgg acgggcccat ttctaatatt 900 gaaggagtat tttctatggt catcgtggtt gatcggaaac cacatgttag tcaatctggc 960 cgtctacata catttgatga gttgtttggc gcgcgtatcc attgtcacgg taatttatct 1020 gtcgtacctg ctttgaagga ccgttactac attagacacg ttacgaagcg tgtggtgtct 1080 cttgaaaagg acacgttact gattgatctc catggtacga cacatctgtc taacaagcgt 1140 tataattgtt gggcatcgtt cagtgatctt gaacgggatt catgtaatgg cgtttacggt 1200 aacataacta agaacgctct gttagtgtat tactgttggc tgtcggatgc ccattccaag 1260 gcatccaaca tatgtatcgt ttgaactgga ctatttggga tgattaagat taataaattg 1320 cacaagtccc gcaattaaat aagaactaaa tactgaacag ggctgtttat tctactatta 1380 aaaatggccg cgcagcgcaa cactctccaa aacatgatga gcgataacat taacaactaa 1440 tatgagcgta aagcgaacta ataatttaat tgggcattag cttagggatt ttggagtgct 1500 cgggatacaa ctggttttaa tgcactcatg tacagtggat ctaactaatt cgttcaactg 1560 tgacattgac atggtgatgt tcgattgcga ccgttgtatt ccgactattg aagctgattc 1620 cccaggatct aagatgttag ttcccaacct gtttagttcc ctgtatggaa gcagctcttc 1680 ttcaatatct aaatccgcat ttctgttaat tgggcctatt aaactctttg tggcccaaga 1740 ttcacctgga ttaatttcaa ttgggcctct tagcccaaat ctagatgacg atgcggattt 1800 gaccagtctt ctctcccact tgccgtatcc cacgtgccag aaatcaatgt ccttttcgct 1860 aaattgtttt gcaagtatct ttactgtcgg tgcccggaaa gggatatcaa cggagtgctt 1920 cgccgacgat agcttcagtt tgcccttgaa tttagcgaaa tgcgtcattt gatgcacatt 1980 cgagtctgag actcgatagt ataacttcca tgggattggg tcttttagag agaagaacga 2040 tgatgaaaaa tagtggagat ctatgttaca tcttatcgga aaagtccacg acgcttgcag 2100 cgattcattg tccgtcatgc gtttgtcgtg aatctccact attaccgtac ccgatgcgtt 2160 aatcggaacc tgttgccgat attctatgac gcagtggtcg attttcatac aactacgact 2220 cagcctcgct gttatctgag atgccgtcga gggaaattgc agaacaattt ccgttaggtc 2280 gtgcgataac tgaaattcgt ccctctgcga ttcaatataa ttaaatgcgc ttgggggtgg 2340 aactaattga gaacccatta gctcttgtaa taactgaaca agcaatttaa atcaggaatc 2400 gcactggaaa acatgagttc aggatagata tatgcggaac gaagtgagtt agggtttgag 2460 tggcatattt tgtaaatatg catcgggaca ccaggaggtg tcctctcaac tttctcatat 2520 tgctggtgtc ctggtgtcct atatatacct caagacacat aaagcctcta ggggacacca 2580 aggggcaaaa tcggccatcc gcaataatat t 2611 //