ID KC433316; SV 1; linear; genomic RNA; STD; VRL; 5914 BP. XX AC KC433316; XX DT 07-APR-2013 (Rel. 116, Created) DT 07-APR-2013 (Rel. 116, Last updated, Version 1) XX DE Blueberry necrotic ring blotch virus segment RNA1, complete sequence. XX KW . XX OS Blueberry necrotic ring blotch virus OC Viruses; Riboviria; Kitaviridae; Blunervirus. XX RN [1] RP 1-5914 RX DOI; 10.1007/s00705-013-1653-3. RX PUBMED; 23649174. RA Cantu-Iris M., Harmon P.F., Londono A., Polston J.E.; RT "A variant of blueberry necrotic ring blotch virus associated with red RT lesions in blueberry"; RL Arch. Virol. 158(10):2197-2200(2013). XX RN [2] RP 1-5914 RA Cantu-Iris M., Harmon P.F., Londono A., Polston J.E.; RT ; RL Submitted (02-JAN-2013) to the INSDC. RL Plant Pathology, University of Florida, 1453 Fifield Hall Hull Rd, RL Gainesville, FL 32611, USA XX DR MD5; 18e72df756798f1b192a82f2b6e481b9. XX CC GenBank Accession Numbers KC433316-KC433319 represent sequences CC from the 4 segments of Blueberry necrotic ring blotch virus isolate CC BNRBV-RL. CC ##Assembly-Data-START## CC Assembly Method :: Sequencher v. 5.8 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..5914 FT /organism="Blueberry necrotic ring blotch virus" FT /segment="RNA1" FT /host="Vaccinium corymbosum cv. Abundance" FT /isolate="BNRBV-RL" FT /mol_type="genomic RNA" FT /country="USA" FT /collection_date="Mar-2011" FT /db_xref="taxon:1094249" FT CDS 86..5749 FT /codon_start=1 FT /product="methyltransferase helicase" FT /db_xref="GOA:M4YEE1" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR003323" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:M4YEE1" FT /protein_id="AGI44297.1" FT /translation="MTTATIRSRFVEEKGSLQCETDRDGGILQSSNPSYPVCNEVDEHL FT ATLSGVTDDIKEHFLRDALLRNAMVSDHLKSSIQQNLLAQASQRRARTPRYVKYCNEDD FT AKFLQVSFPVYRIERREAADFTPHGYARDSRALDTWYAYDHILKYKPGYTLDSHYDVYC FT KEVGANLAFFASAGEYFSNVHLCMPVLNHKDQFRHVGFRQLANEKAAIAALNPRHNPHV FT HSFNNNGLLTCFKKSEYCTVKAMKVNISHVYDLSVNMIAGIIDSSHAKEVCLTMLFDSR FT MWIENSGLLPRFNMTWEKFKVLGRTRIRLYFLNDTNPAFDHDFDVYTHVLRTRVIRTPE FT GRVFLVNQDRLVNYTVVVQMIQAVGNYIPPETIVQRFPLLSDVGFKVLKTFRYDTLTNE FT TYIHIRTIPNNFYERIYSILSSCKQEAFTIQHTNKVIQSLNSTVVTGGLTTAGPNMDPD FT ELLDISTSIYHCLWRRFFEQGKTVSAMSSEEQRLRALNSSSAGVVGFFYYLWKVFWVMN FT KDKLPISEVITPEALDAHLSSSAAINHDSWGVQFLKHIGLKPSRRFNLQILNPRVIELS FT NYIDEIQLEKDNPLSFTGPIDYNSALLHAASQSPTDCSTLQIVRDMHNETIDFCDNCAA FT ELNPITVPGDGNCFYNAFLRCIGSTASPNTVRQRLMDSRFLPFLCMTKVGDSYVVSAEK FT VTALRDRLRPDDKLGPDKWVNNDVVVLTAYEYEVTVCIHKVGSHCRINRKSVIGSKDTE FT LDHIVHLELVDKHYSALLPVEYSPAADQVNLSDYSNDSSQMELMSLDGWSMFSIHEAFA FT AIPIFERKYGPTGSSLLTKDYRFESKYVEASILSSSFSNIPNTYRSFYGPMLAQCMDHF FT REKFGSLNSNVYDVHQANGCSTRVLADYYLASGIVRVSFSGSKEIVLDAVMNTAAVART FT ISIPRRNLNPYVKGTIDFLLINPMVFLDALMYVDLQRYHEYLIDCYPFFSSLRAKGNVV FT MCVPKFIELPTLKMMYLLSKLFEEVTVYFPSCVPDHIPYCFWVFQAKLEEKDLKDKFPE FT RIAEAIDNSPDECSGAFAYFIDSVVATIGESCDAAVQRIINYASDPTTKCRLDAKTLKA FT CEMFYMTKFVVDDDAPLNSNERAISSVDVESRVVSGEIRESVIDCSSNSPLGLNKSVSI FT SPDSESSGSNSSDPSSQIWASSKDNIFTRSLSKVQRTTRLTAQVTRNVVGNTKVVRDSF FT FGTFKFSEKWVETHVGEQYQFRRHDMYMHIFSREVYSQYLKYLKIHDFEQTVQLEYLVS FT RYRALSVKNNVFEVKYLLVLLRNLYNFLQTTQNVQPYVVFNIPRSQFGQHLCTSFFFKL FT CDLRFFMYDVLPVLDSTPVVENDPQLLVPLVSPIVDTVVKNVRVVIPCVEEESDTPVVE FT SKEVQEHFEDDKDMTGGFLKDAYEDCMKNSYRPVLRDYSTHLSQVVRTTLAKAKDLSTK FT VVNVYNSVQKSEIKNNLMVVLGEDYDSAYINIKGKQDLFGGFAAIGKDNSNRYFVPIYQ FT SAGTYSIGSVRRAPNTSAVDGPYCTFECLSVFTEQDIYKNLNVLDLDKVEKQLLTTVFS FT IVQAGPGCGKTYDIVRRLVETFLSGTVSLMAVLKSRNDYPSVRQKFEKQIKDKKLSFNK FT KKIDEFFTSHVTSIDTILMARPHTYKHETLLFDEAMISHPGKILYACFLTGCKYAECYG FT DVMQIPFIDRTNSAVPCQYPETAKCFPISRVMDVSFRCPGDIVRFLAPKYKRLYIQLGM FT SVPADETQLFKTHSAVGNSVEVKKISGISDIKLLPSDYVILTFTQVEKNTVAQQKTHAV FT HTIHEYQGLEARNIAIVRLNTLNAYENTFNIYESEHHIVTGISRHTVSLKYLTVIDTDH FT LSKLLKEIEKYTF" XX SQ Sequence 5914 BP; 1607 A; 1088 C; 1292 G; 1927 T; 0 other; gacaaatcac tctgtcaaaa ctatcattga tcttttccag atcgacattc actactgcta 60 ctatatcgta gcgcaatact acaaaatgac tacagccact atacgatcta ggtttgttga 120 ggagaagggc tctctccaat gcgagactga tcgtgatggt gggatactac agtcgtcaaa 180 ccccagttat ccggtctgta acgaggttga cgagcatcta gcaactctct ctggtgtcac 240 tgatgacatc aaggagcatt tccttcgcga tgccttgttg aggaacgcga tggtttcaga 300 ccatttgaag agctcaatcc aacagaattt gcttgcacag gcttcacaac gtcgagcgcg 360 taccccacgg tacgtcaaat attgtaatga agatgatgca aaatttttac aagtgtcctt 420 tcccgtgtat cgtatagaga ggcgagaagc cgctgacttt actccccatg gttacgcacg 480 cgattcacga gctttagata cttggtacgc atacgatcac attctgaagt ataaacccgg 540 ctatacttta gattctcatt atgatgtgta ttgcaaagaa gttggagcga atctggcatt 600 ttttgccagc gccggagaat atttctcaaa cgtccacctt tgtatgcctg ttcttaatca 660 taaagatcaa tttcgccatg ttggattcag acaactggct aatgaaaaag ctgcaattgc 720 tgctttaaac cctcgtcata atcctcatgt tcactccttt aacaacaatg gtttgctcac 780 gtgcttcaaa aaatcggagt actgcactgt caaagcaatg aaagttaaca tttctcatgt 840 ttatgatctc agcgtcaata tgatagctgg tatcatcgat tctagccatg ccaaggaggt 900 ttgcttgaca atgctctttg attctaggat gtggattgaa aattcagggt tattaccacg 960 ttttaatatg acttgggaaa aatttaaggt gttgggacgt acgagaatca ggttgtattt 1020 cttgaacgac acaaatcctg cttttgacca tgattttgat gtttatactc atgtgttacg 1080 cactagagtt attcgtacac ccgaaggtcg tgtattcttg gttaatcagg atagattggt 1140 taattatact gttgtcgttc aaatgattca agcggtggga aattacatcc caccggagac 1200 cattgttcag aggtttccac ttttgtcaga tgttggcttt aaagttctaa aaacatttcg 1260 ttacgacact ctgacaaatg aaacatatat acatattcgt actattccta ataatttcta 1320 cgagcgcata tactctatac tttcaagctg caaacaagag gctttcacca tacagcatac 1380 gaataaggtg attcagtccc ttaattccac tgttgtcacg ggaggattga ccaccgcagg 1440 accaaatatg gacccagatg agttgttgga tatttccaca tcaatctatc attgtttgtg 1500 gcgaagattt tttgagcaag gtaagactgt gagtgctatg agcagcgagg aacagaggtt 1560 gcgtgccttg aattcttcaa gcgctggtgt tgtgggtttc ttctactact tgtggaaggt 1620 tttttgggtg atgaataagg ataagttacc tatttctgag gttatcacac ccgaagcgct 1680 ggacgcacat ctgagttcga gtgctgccat taatcacgat tcttggggag tgcagttttt 1740 gaaacacata ggtctaaaac cttcgcggcg ttttaatctc caaatattga atcctagggt 1800 aattgaactc tctaattata ttgatgagat tcagttggag aaagataacc ctttgagttt 1860 cactggacca attgattata attctgcgct tctacatgcg gcttcacaaa gtcctacgga 1920 ttgttccact ttacagattg tcagagacat gcacaatgag acgattgatt tttgtgataa 1980 ttgtgcggct gaattgaatc ccattaccgt tcccggtgat ggaaactgtt tttacaacgc 2040 ttttttgaga tgtatcgggt ctaccgcttc accgaataca gtgcgtcagc gactaatgga 2100 ttctcgtttc ttaccatttt tgtgtatgac taaggttggt gacagttacg ttgtctcagc 2160 tgaaaaggtg accgctttga gagatagatt gcggcccgat gataaattgg gtcctgataa 2220 gtgggtcaat aatgatgttg ttgtgctgac tgcgtatgaa tatgaagtta ctgtttgcat 2280 acacaaagtt gggagtcatt gtaggatcaa cagaaaatcg gttatcggaa gtaaagatac 2340 tgagcttgat catattgttc atttggaatt agttgataag cactattctg cgttgttacc 2400 tgtggaatac agtccagctg ctgatcaagt gaatttatct gattactcta acgatagttc 2460 gcaaatggaa cttatgtctc tcgatgggtg gtcaatgttt tctattcacg aagctttcgc 2520 tgcaatccca atttttgaga gaaagtatgg tcccacgggt tcttcattgt tgaccaaaga 2580 ttataggttt gagtctaagt atgtcgaggc gtctattttg tcatcaagtt tctcaaacat 2640 accaaacact taccgttcct tttacggtcc tatgttggcc cagtgtatgg atcattttag 2700 ggaaaaattt ggctctttga attcaaatgt ttatgatgtc catcaagcga atggttgttc 2760 aacacgagtg cttgcagact attatttggc ctctgggatt gttagagtaa gtttctcggg 2820 ttcgaaggag atagttctag acgcggttat gaataccgct gctgttgctc gcacaattag 2880 cattccgaga agaaatttaa atccgtatgt aaagggaaca attgatttct tgcttataaa 2940 tcctatggtc tttcttgatg ctctaatgta cgtcgatctt caaaggtacc atgaatattt 3000 gattgactgt tacccttttt ttagttcttt gagagctaaa ggtaatgttg tcatgtgtgt 3060 gcctaagttc attgagttgc ctactttgaa gatgatgtat ttgttgagca aactttttga 3120 ggaagttact gtttatttcc catcctgtgt accggatcac attccttatt gcttttgggt 3180 ttttcaggcg aaattggagg agaaagattt gaaggacaag ttcccagaga gaatcgctga 3240 agcaattgat aattctcccg atgagtgttc aggagccttt gcatatttta ttgattcggt 3300 tgtggctacc attggtgaaa gttgcgatgc ggccgtacaa aggatcatta attatgctag 3360 tgacccgact actaagtgta ggttggacgc aaaaacattg aaagcatgtg agatgtttta 3420 tatgactaaa tttgttgtcg atgacgacgc gccattgaac tcaaatgagc gagcgataag 3480 ctccgttgat gttgaatcga gagttgtgag tggtgaaatt cgtgagtccg tgattgattg 3540 tagttctaat tcccctttgg gtttgaataa gagcgtttcg atttcacccg attccgagtc 3600 atccggtagc aattcctcgg atccgtcttc gcagatttgg gcgtcttcta aggataacat 3660 ttttactaga tctctctcga aagtccagcg gacaactcgc ttaactgctc aagtcactcg 3720 taacgttgtg ggtaacacaa aagttgttcg tgattccttc tttgggactt ttaaatttag 3780 tgagaaatgg gttgagactc atgttggtga acagtatcaa ttcaggagac acgacatgta 3840 tatgcacata ttcagtcgtg aagtttacag tcaatatttg aaatatctta aaatacatga 3900 tttcgaacag actgttcagt tagaatacct ggtttctagg tatcgtgctt tatctgttaa 3960 aaataacgtg ttcgaagtta aatatctcct ggtattgtta cggaatcttt ataacttcct 4020 gcaaacaacc cagaatgttc aaccttatgt tgtctttaat attccgaggt cgcaatttgg 4080 tcaacacttg tgtaccagct ttttctttaa attgtgtgac ttacggttct ttatgtatga 4140 cgtgctacct gtacttgact ccacaccggt ggtagagaat gatcctcagc tactggttcc 4200 gttggtttct cctatagtgg acaccgtcgt gaagaacgtc agggtagtta ttccatgtgt 4260 tgaagaagag tctgatacac ctgtggttga atcgaaagaa gtgcaagaac attttgaaga 4320 cgacaaggat atgacgggtg ggtttttgaa ggatgcgtat gaagattgta tgaaaaactc 4380 ctatagacct gttttgcgag actattctac ccatctctct caagttgtga gaaccacttt 4440 agcaaaggct aaggatttgt ccaccaaggt tgttaatgtt tataattcgg ttcaaaagtc 4500 tgagatcaag aacaacttga tggtggtttt gggtgaggat tatgattctg catacataaa 4560 tattaagggt aaacaggact tgtttggagg atttgcagca attggaaagg ataattctaa 4620 tcgttatttt gtaccaattt atcagtctgc gggaacttac agcattggtt cagtccgtag 4680 agcccctaac acttctgcag tggatggacc gtactgtaca tttgagtgtc tgagtgtctt 4740 tacagagcaa gatatctaca agaatctcaa cgtacttgat cttgataaag ttgagaaaca 4800 gctgttgact acagtatttt caattgtgca agccggtcca ggttgtggaa agacgtatga 4860 tattgttagg aggcttgtgg aaaccttctt gtctggaact gtctctttga tggcagtgtt 4920 gaaaagtcgc aacgattatc cgagtgtgag gcaaaagttt gagaagcaga ttaaggataa 4980 gaaactctca tttaataaga agaaaattga tgagtttttt acttcccatg tcacgtcaat 5040 tgacacgatt cttatggcga gacctcatac ctataagcat gagactttgt tatttgacga 5100 ggcgatgatt tctcatccgg gaaagatact ttatgcttgt ttcctcactg gttgtaagta 5160 tgccgagtgt tatggtgatg tcatgcaaat accgttcatt gatcgtacta actcggctgt 5220 tccatgtcaa tatccggaga cggctaaatg tttccctatc agtcgggtta tggacgtttc 5280 ttttagatgt ccgggtgata tagttagatt tttggcacca aaatataaac ggttatacat 5340 acaactgggt atgagtgttc ctgcagatga gactcaattg tttaagaccc atagtgctgt 5400 tggtaattct gttgaagtca agaaaatatc tggaatttca gatataaagc ttttaccatc 5460 agactatgtg attcttacat ttactcaggt tgagaaaaat actgttgctc aacaaaagac 5520 tcacgctgtg catactatac atgagtatca gggtttggaa gcgcgtaata ttgctattgt 5580 tcgcctaaat actctaaatg catatgaaaa tactttcaat atttatgagt ctgaacacca 5640 tatcgtcacg ggtatctcgc gtcatactgt gagtttgaaa tacttgacgg ttatcgacac 5700 ggaccatctt tccaagttgc tcaaggaaat tgaaaagtac accttttaaa ggtatatcac 5760 tgattacacc gggttttcag ttattcctaa ataatgttgg gtttttcccg gttttcccaa 5820 ccattcctat gttataagtc ctcagtattc gatctgttgt aagtttagtt taattgttgt 5880 tctttggtgc ttccctcttg ttattttatt atcg 5914 //