ID KC432629; SV 1; linear; genomic RNA; STD; VRL; 4015 BP. XX AC KC432629; XX DT 12-FEB-2013 (Rel. 115, Created) DT 24-APR-2013 (Rel. 116, Last updated, Version 2) XX DE Sathuvachari virus isolate IAn66411 segment 1, complete sequence. XX KW . XX OS Sathuvachari virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Orbivirus. XX RN [1] RP 1-4015 RX DOI; 10.1099/vir.0.046748-0. RX PUBMED; 23364187. RA Kapoor A., Tesh R.B., Duraisamy R., Popov V.L., Travassos da Rosa A.P., RA Lipkin W.I.; RT "A novel mosquito-borne Orbivirus species found in South-east Asia"; RL J. Gen. Virol. 94(Pt 5):1051-1057(2013). XX RN [2] RP 1-4015 RA Kapoor A., Tesh R.B., Duraisamy R., Popov V.L., Travassos da Rosa A.P., RA Lipkin W.I.; RT ; RL Submitted (02-JAN-2013) to the INSDC. RL Center for Infection and Immunity, Columbia University, 732 West, 168 RL Street, New York, NY 10032, USA XX DR MD5; d44abbecafd818b60739eeba2309f25d. DR EuropePMC; PMC3998237; 23364187. XX CC GenBank Accession Numbers KC432629-KC432638 represent complete CC genome of Sathuvachari virus isolate IAn66411. CC ##Assembly-Data-START## CC Assembly Method :: Sequencher v. 5.1 CC Coverage :: 4x CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..4015 FT /organism="Sathuvachari virus" FT /segment="1" FT /host="Brahminy myna" FT /isolate="IAn66411" FT /mol_type="genomic RNA" FT /country="India" FT /collection_date="1963" FT /db_xref="taxon:1289939" FT CDS 13..3978 FT /codon_start=1 FT /product="VP1" FT /db_xref="GOA:M1GUW7" FT /db_xref="InterPro:IPR007097" FT /db_xref="InterPro:IPR008723" FT /db_xref="UniProtKB/TrEMBL:M1GUW7" FT /protein_id="AGE32260.1" FT /translation="MAVVVQDLAWIRGVLESMFDGLKFDGKQAEHFYYKYSKRVSEQFS FT KYRREKRGKDGGLTQVDEERGSIMEKIGKSFHGLKVINELTWEQVSEKYYTHWKIGVTG FT SGWQELEIYLASTLPLSELEPEEEFLRNYEISEKCETDAEKFVRQRMRNECAVYGDMGL FT RHWFHLLCELSYYLEYAPLGLDLLNQLIHKYGAPFKQNMRDLSQISEEVLSSSIVLIFE FT MSLMESILEFNILLRLRDEGKMSNLRLSNGERINYFEVIRELYVLMLPHPKKINNGLRA FT VYSWFVKCWGTGCHFQNVLESRGGDDRNSKDVVYCKFKKVENQFANLVLYSKFHQQSKK FT DNVTKMYDVIKYSQMVGKHSRGLKNLEKLMLEVYELEFDPTKIEHMILASLLLSIQTMS FT GYGRAWVVNKGDDPEKILLPEKNNFIDRVAKQTEVNFSLAYQEAERHGHKIVPPHEMYS FT SLLRLAKNTSSGMSTTVEVAKSYGPKTERREEVIKITSRQKAMVIMREGDKIYTEENLK FT KKFNTPEFFQTKGSRDVPIKSTRTIFAIHISVLAPQLILTLPLNEYFAQAGGATTPDTI FT TLAGKVIIGDLEATGSRLMDASDTFRNTSDPNILTLALDYSEYDSHMTYYNFRRGMLAG FT MRHALAKYSSYRYEGYTINDLIEFGYGDGRVHNTLWNGKRMVRKMSRIKYENLREEDRT FT PPDDAAFAIRTPGVHPIRTASLISEDTGDGDFVLVSPWDGSDLARVTTHLSGENSTLIA FT NSLHNMAIGRVMQEEISLKVPNTLQILSEMYVGDDTLFYIAPMTRNVARINEAIEVIFD FT VVKKCGHEASAAKTTFLPFSAEKTQTHAKNGVYIPQDRMMILSSEKPKNIENIQAYMRS FT NVMTFVTKVSRGFDERLATIFLMYKSAILGYRKMKRTVYSEVFRSRHFLSEEDGYTVCR FT VRDPGVLFLPVDWHGYGASMNSLNIVSTPELILDMLQMPXCVYQTVMLLRLGETTLPCW FT NETEADKKQIRSHTSMALFSKLARPAVVASLTDEYLSNAVRELPLQGLGPHNLSETMLH FT SALLKEQRARTLLSPGYEIDFQKLLNEGAKQKLIKIYHGDMNIEAGYTKMFNLRYTPVE FT NDVHFGPDLNLSTKFKMQRVVLGVRQTTKMRMSYVDKIDSILRGDVIMRGFITSNMIMR FT LLEEIGTGHTVEDLSTIFQLMNLDARVAMRLAEYVGKYKIRFDVLKVNRAGIAGDEFSM FT SLPICTQEMIDKYIVFPHELQQAERDAITLHVSQLIMLRASLGLQPAVFYVDVNEEHKK FT QIRHARVQARLPSRRRITKLCTDVRNLVASMVEQQFL" XX SQ Sequence 4015 BP; 1288 A; 646 C; 989 G; 1091 T; 1 other; ggtttagata tcatggctgt tgtagtgcaa gacctcgctt ggattcgggg cgtactggaa 60 tctatgttcg acggtttgaa atttgatgga aaacaagcgg agcattttta ctataagtat 120 tcaaaaagag tgtcagagca gttttcaaag tatagacggg agaaaagagg aaaagatggt 180 ggattgactc aggtcgatga ggagagggga tcaattatgg agaaaattgg gaagtctttc 240 catgggctga aggtcataaa tgaactaaca tgggaacaag tgtctgaaaa atattatact 300 cattggaaaa ttggagttac ggggagtggc tggcaagagc ttgaaattta tttagcgtca 360 actctgccat tgagcgaatt agaacccgag gaagagtttc tgagaaatta cgaaatttct 420 gagaaatgtg agactgacgc cgaaaagttc gtaagacaga ggatgcgtaa tgagtgcgca 480 gtctatggtg atatggggtt aagacattgg tttcatttac tttgtgaact aagttattat 540 ctggaatacg cgccactagg gttggacctt ttaaaccaac taatacataa atatggtgcg 600 ccgtttaagc agaatatgag agacctatct cagatcagcg aggaggttct tagttccagc 660 attgtgttaa tttttgaaat gagtctaatg gaatcaattt tagaatttaa catcttattg 720 agattgcgtg atgaaggaaa gatgtcaaat ttaagactgt cgaacggaga aaggattaac 780 tattttgagg taatacgaga actatacgtt ttaatgctgc cccatccaaa gaaaataaac 840 aacgggttac gtgctgtata ctcttggttc gtaaaatgtt ggggcacagg ctgtcatttt 900 cagaacgttc tagaatcacg tggaggcgat gacagaaact caaaagatgt agtttattgt 960 aaatttaaaa aagttgagaa ccagtttgca aatttagttt tatattcaaa atttcatcaa 1020 cagtcgaaga aagacaacgt cacgaaaatg tatgatgtta ttaaatacag tcagatggtt 1080 ggtaaacaca gtaggggctt aaagaattta gagaaattga tgttggaagt ttatgagcta 1140 gaatttgatc ccacaaagat agagcatatg attctagcat cactgctgtt atctattcaa 1200 acgatgtcag gatatggtag ggcttgggta gttaacaaag gtgatgatcc agagaagata 1260 ctattaccag aaaagaataa ctttattgat cgggtagcga aacagactga ggtaaacttt 1320 tcgcttgcgt atcaggaagc tgagagacat gggcataaaa tcgtacctcc acatgagatg 1380 tactcatctc tattaagatt ggctaaaaat acttcatcag gaatgagcac gactgttgaa 1440 gttgcgaaat cgtatggtcc gaagacggag agaagggaag aagttataaa aatcacaagc 1500 cgccagaaag caatggtgat aatgcgtgaa ggtgataaga tatatacaga agagaattta 1560 aaaaagaaat ttaatacgcc agagtttttc caaacaaaag gttcacgaga tgtgccaatt 1620 aagtctactc gaacgatttt cgcgatccat ataagcgttt tagctccaca attgatttta 1680 acattaccgc tgaatgaata ttttgctcaa gctggtggcg ccacgactcc tgatacaatt 1740 acacttgcag gcaaagttat cattggagat ctagaagcta cagggtcgcg attgatggat 1800 gctagcgata cttttaggaa tacgtctgat ccaaatattt tgacgctagc gttggattat 1860 tcagagtatg acagtcatat gacgtattat aatttcaggc ggggaatgct cgcggggatg 1920 aggcatgcat tagcgaagta tagcagttat aggtatgaag gctacacgat aaatgatttg 1980 attgaatttg gctacggaga tggtagggta cataataccc tatggaatgg gaagcgaatg 2040 gtcagaaaaa tgtcgcggat taagtacgaa aatctgaggg aagaagatag aacgccgccg 2100 gatgacgctg cttttgcaat ccgcacgcca ggagtccatc caatacgtac agcgagtttg 2160 atttcggaag atacaggaga tggggacttt gtactagtgt cgccttggga cggcagtgat 2220 ctagcgcggg tgacgacaca tttatcgggt gagaattcaa ctctgatcgc gaattcgcta 2280 cataatatgg cgatcggtcg tgttatgcag gaagagattt cattaaaagt tcccaatacg 2340 ttacaaatct tatcagaaat gtatgtgggt gatgatacgt tgttttacat cgcgccgatg 2400 actagaaatg tagcacgaat aaatgaggct atcgaggtaa tcttcgacgt tgtgaagaag 2460 tgcggacatg aggcatcagc tgcaaagaca acatttttac catttagcgc ggagaaaaca 2520 cagacccatg cgaaaaatgg tgtatatata ccccaagatc gaatgatgat tctttcatct 2580 gagaagccga aaaatattga gaacatacag gcatatatga ggtctaatgt gatgacgttt 2640 gtgacaaagg ttagtagagg gttcgatgag cgacttgcta ctattttctt aatgtataaa 2700 agtgctatac tggggtatag gaaaatgaag agaacagtat attcagaagt ctttcgaagt 2760 cgccatttcc taagcgaaga agacggctac acagtatgtc gggttaggga tccaggagtt 2820 ttattccttc ctgttgattg gcatggatac ggcgcgtcaa tgaattcttt aaacatcgta 2880 tcaacaccgg aattgattct tgatatgtta caaatgccgg antgtgtcta ccagacggtt 2940 atgctgctac gactgggtga gactacactg ccatgttgga atgagacaga ggcagataaa 3000 aaacagatac gtagccatac gtctatggcg ttattctcaa aattagcgcg accagcagtt 3060 gttgcttcat taacagacga atatttatcg aatgcggtgc gtgaattgcc attacagggt 3120 ttggggccac ataatctatc tgaaaccatg ttacacagtg cactattgaa agaacagcgt 3180 gcacgaacat tattgtcgcc gggatacgaa atcgatttcc agaaattgct caatgaaggt 3240 gcgaaacaaa agctgattaa gatatatcac ggtgacatga atattgaagc gggttatact 3300 aagatgttta atttaaggta tacgccagtt gagaacgatg ttcattttgg gccggattta 3360 aatctctcaa cgaagttcaa gatgcaaaga gtggtgttgg gcgttagaca aacaacgaag 3420 atgcgaatgt cgtacgttga caagattgat agtatactac gaggtgatgt gataatgagg 3480 ggatttatta catcgaacat gattatgcgt ctactagagg agattggtac aggtcatacc 3540 gttgaagacc tatcaacgat tttccagctt atgaatttgg acgcgcgtgt tgcaatgcga 3600 ttagcggagt acgttggtaa atataaaata cgctttgatg tgctaaaggt taatcgagct 3660 gggatcgcgg gtgatgaatt tagcatgtcg ctaccaattt gtacgcagga aatgatcgat 3720 aagtatatcg tcttcccaca tgagttacag caagctgaac gagacgctat cactctacat 3780 gtgtcacaat taattatgtt gagggcgtca ttaggattgc aaccagctgt tttctacgtg 3840 gatgtgaatg aagaacataa aaagcaaatt cgccatgcgc gtgtgcaagc tagattaccc 3900 agtagaagac ggataacaaa gttatgtaca gatgtgcgga atttagtggc atcgatggtc 3960 gaacagcaat tcttgtagca tggacccaac ctaggtcgga tatcataaaa gtacc 4015 //