ID KC430936; SV 1; circular; genomic DNA; STD; VRL; 2602 BP. XX AC KC430936; XX DT 07-APR-2013 (Rel. 116, Created) DT 11-APR-2013 (Rel. 116, Last updated, Version 2) XX DE Vigna yellow mosaic virus isolate Yautepec-2007 segment A, complete DE sequence. XX KW . XX OS Vigna yellow mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2602 RA Torres-Herrera I., Cardenas-Conejo Y., Ambriz-Granados S., RA Mauricio-Castillo J.A., Moreno-Valenzuela O., Arguello-Astorga G.R.; RT "A new begomovirus isolated from Vigna elegans in Morelos, Mexico"; RL Unpublished. XX RN [2] RP 1-2602 RA Torres-Herrera I., Cardenas-Conejo Y., Ambriz-Granados S., RA Mauricio-Castillo J.A., Moreno-Valenzuela O., Arguello-Astorga G.R.; RT ; RL Submitted (01-JAN-2013) to the INSDC. RL Division de Biologia Molecular, Instituto Potosino de investigacion RL Cientifica y Tecnologica (IPICYT), Camino a la Presa San Jose 2055. Col. RL Lomas 4 seccion, San Luis Potosi, S.L.P. 78216, Mexico XX DR MD5; 5893ad4cf6aa35b1e8b5c7c5496077d1. XX CC ##Assembly-Data-START## CC Assembly Method :: DNAStar v. Edit seq, MegAlign CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2602 FT /organism="Vigna yellow mosaic virus" FT /segment="A" FT /host="Vigna elegans" FT /isolate="Yautepec-2007" FT /mol_type="genomic DNA" FT /country="Mexico:Morelos" FT /collection_date="2007" FT /db_xref="taxon:1312724" FT gene 188..937 FT /gene="AV1" FT CDS 188..937 FT /codon_start=1 FT /gene="AV1" FT /product="CP" FT /note="capsid protein; encapsulates the viral genome; AR1" FT /db_xref="GOA:M4YFA2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:M4YFA2" FT /protein_id="AGI42765.1" FT /translation="MPKRDAPWRNMAGTSKVTRSSNYSPRGGPKFNKADAWVNRPMYRK FT PRIYRTLRGPDVPRGCEGPCKVQSYEQRHDVSHVGKVMCISDITRGNGITHRVGKRFCV FT KSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKN FT DLRDRFQVMHKFYGKVTGGQYASNEQALVKRFWKVNNYVVYNHQEAGKYENHTENALLL FT YMACTHASNPVYATLKIRIYFYDSITN" FT gene complement(934..1332) FT /gene="AC3" FT CDS complement(934..1332) FT /codon_start=1 FT /gene="AC3" FT /product="REn" FT /note="rep-interacting protein; enhances function of Rep FT protein; AL3" FT /db_xref="GOA:M4YBP7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:M4YBP7" FT /protein_id="AGI42766.1" FT /translation="MDSRTGEFITVTQAENSVFIWEVPNPLYFKIYRIEDPIYTRTRIY FT HIQIRFNYNIRKALNLHKAFLNFQIWTTSVQASGTTYLNRFKYLVMLYLDRIGLVGINN FT VVRAVRFATDKRYVNAVLENHEIKFKYY" FT gene complement(1073..1468) FT /gene="AC2" FT CDS complement(1073..1468) FT /codon_start=1 FT /gene="AC2" FT /product="TrAP" FT /note="transcription activator; activation of late genes; FT silencing-suppressor; AL2" FT /db_xref="GOA:M4YC62" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:M4YC62" FT /protein_id="AGI42767.1" FT /translation="MLNSSSSTPPSIKAQHRIAKKKAVRRRRIDLNCGCSIFIHINCAD FT NGFTHRGIHHCNSSREFRFYLGSSKSPLFQDIQDRGSNIHKDENLPHPNPVQLQHKEST FT ESTQSFPEFPNLDDVSSSFRNDLFEQI" FT gene complement(1410..2459) FT /gene="AC1" FT CDS complement(1410..2459) FT /codon_start=1 FT /gene="AC1" FT /product="replication protein" FT /note="AL1; rolling-circle initiation protein" FT /db_xref="GOA:M4YSI9" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:M4YSI9" FT /protein_id="AGI42768.1" FT /translation="MPPKPSAFRIQARNIFLTYPQCDINKDDALQMLQSLSWSVVKPTY FT IRVSREEHADGFPHLHCLIQLSGKPSIKDARFFDITHPRRSTRFHPNIQAAKDSNAVKN FT YITKEGDYCESGQYKVSGATKSNKDDVYHNAINAGSVKEALDIIRVGDPKTFIVNYHNV FT RTNIERLFQKAPEPWVPPFQLSSFTSVPDEMQQWVHDYFGKDAAARADRPISIIVEGDS FT RTGKTMWARALGVHNYLSGHLDFNSSVYSNEAVYNVIDDISPHYLKLKHWKELIGAQKN FT WQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDYLDKEENASLKHWTLQNAKFIFLNTP FT LYQSTTQDC" FT gene complement(2051..2380) FT /gene="AC4" FT CDS complement(2051..2380) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="UniProtKB/TrEMBL:M4YDU3" FT /protein_id="AGI42769.1" FT /translation="MMLFRCFRVSRGQSSNRHTYEFPERNMQMDSHISTVSFNYPVSPA FT SRMLDFSTSLTPEGLPVFTQTFKQPKIQMQSRITSPKRVIIVNPGSTKCLGQQNRTKTT FT STITQ" XX SQ Sequence 2602 BP; 689 A; 518 C; 581 G; 814 T; 0 other; accggatggc cgcgattttt ttggagaccc cttcatctcg ctccacgtgt cccaacccta 60 ttcacgtgga ccacatgtcg tccaatcaaa agtcgtttgt cgagcttctt taatttaaac 120 ttggtcacaa agttcaataa ggatatatac gttggacgac tgtcgatatt ttcgtcttta 180 attcgaaatg cctaagcggg atgccccatg gcgtaacatg gcggggacct caaaggttac 240 ccgttcgagt aattattctc ctcgtggtgg tcctaaattc aacaaggccg atgcctgggt 300 taacaggccc atgtacagga agcccaggat ataccgcaca ttgagaggtc ccgatgtccc 360 tagagggtgt gaaggtcctt gtaaggtaca atcttatgag cagcgacatg atgtgtctca 420 tgtcggtaag gtaatgtgca tatctgatat tacccgtggc aacggtataa cccaccgcgt 480 tggtaaacgt ttttgtgtta agtctgtata cattttaggg aagatatgga tggacgaaaa 540 tatcaagttg aagaaccata cgaacagtgt catgttttgg ttagtcagag accgtagacc 600 atatgggact cctatggatt ttggacaagt attcaatatg ttcgacaatg aacccagtac 660 tgcgactgtt aagaacgatt tacgtgatcg ttttcaagtg atgcacaagt tttatgggaa 720 agttacaggt ggtcaatatg ctagcaacga gcaagcgttg gttaaacgtt tttggaaggt 780 caataattat gttgtgtata accatcaaga agcagggaaa tacgagaatc acactgagaa 840 tgcattattg ttgtatatgg catgtacaca tgcatctaac cctgtgtatg ctaccttgaa 900 aattcggatc tatttttatg attcgataac aaattaataa tatttgaatt ttatttcatg 960 attttctaat acagcattta cataacgttt atctgttgcg aaacgaacag ctcttacaac 1020 attattaata ccaacaagtc ctattctatc taaatacaac ataaccaaat acttaaatct 1080 gttcaaataa gtcgttccgg aagcttgaac tgacgtcgtc cagatttgga aattcaggaa 1140 agctttgtgt agattcagtg ctttccttat gttgtaattg aaccggattt ggatgtggta 1200 aattctcgtc cttgtgtata ttggatcctc tatcctgtat atcttgaaat agaggggatt 1260 tggaacttcc cagataaaaa cggaattctc tgcttgagtt acagtgatga attcccctgt 1320 gcgtgaatcc attatccgcg caattgatgt gtataaatat ggaacagccg cagttcaggt 1380 ctattcttcg tctacgaact gcttttttct tagcaatcct gtgttgtgct ttgatagagg 1440 ggggtgttga ggaagatgaa tttagcattc tgtaatgtcc aatgctttag tgatgcgttt 1500 tcctctttgt cgaggtaatc tttataactg gccccctctc ctggattgca caacacgatt 1560 gacggtatcc cgcctttaat ttgaactggc tttccatatt tgcagtttga ttgccagttt 1620 ttttgggccc caatcaattc tttccagtgc tttagcttta ggtaatgcgg actgatgtca 1680 tcaatgacgt tatagacagc ctcgttagag tacactgaag aattgaaatc aaggtgtcca 1740 ctgaggtaat tatgaacgcc taatgcacga gcccacatgg tttttccggt gcgtgagtca 1800 ccttcaacta tgatactaat cggtctatct gcccgcgcag cggcatcttt tccgaaataa 1860 tcatgaaccc attgctgcat ctcatctgga accgacgtga aggaagagag ttgaaacgga 1920 ggaacccatg gttctggagc cttttgaaat aagcgctcga tgttagtcct cacgttgtgg 1980 tagttgacga tgaatgtctt tggatctccg actctgataa tgtcgagcgc ttcttttaca 2040 ctacccgcat ttattgcgtt atggtagacg tcgtctttgt tcgattttgt tgccccagac 2100 actttgtact gcccggattc acaataatca ccctctttgg tgatgtaatt cttgactgca 2160 tttgaatctt tggctgcttg aatgtttggg tgaaaacggg tagaccttct ggggtgagtg 2220 atgtcgaaaa atctagcatc cttgatgctg ggcttaccgg atagttgaat gagacagtgg 2280 agatgtggga atccatctgc atgttcctct ctggaaactc gtatgtatgt cggtttgacg 2340 actgaccacg agagactctg aagcatctga agagcatcat ctttgtttat gtcacactga 2400 ggatatgtta agaatatgtt tctagcttgt atacgaaaag cagaaggttt cggtggcata 2460 cttgtaaata tgagagggtc tccacccgga gtcctcacta aaacctattg tttgtggaga 2520 tttggagacc catatatatg aatacgttct acaaccctct tagggtctcc aaggggcaat 2580 ttcggccatc cgcaataata tt 2602 //