ID   KC429582; SV 1; linear; genomic RNA; STD; VRL; 1312 BP.
XX
AC   KC429582;
XX
DT   18-MAR-2013 (Rel. 116, Created)
DT   30-OCT-2013 (Rel. 118, Last updated, Version 3)
XX
DE   Citrullus lanatus cryptic virus RNA-dependent RNA polymerase (RdRp) gene,
DE   complete cds.
XX
KW   .
XX
OS   Citrullus lanatus cryptic virus
OC   Viruses; Riboviria; Partitiviridae; unclassified Partitiviridae.
XX
RN   [1]
RP   1-1312
RX   DOI; 10.1007/s11262-013-0937-8.
RX   PUBMED; 23775759.
RA   Sela N., Lachman O., Reingold V., Dombrovsky A.;
RT   "A new cryptic virus belonging to the family Partitiviridae was found in
RT   watermelon co-infected with Melon necrotic spot virus";
RL   Virus Genes 47(2):382-384(2013).
XX
RN   [2]
RP   1-1312
RA   Sela N., Lachman O., Aviv D.;
RT   ;
RL   Submitted (01-JAN-2013) to the INSDC.
RL   Plant Pathology and Weed Research, Aro, Volcani Center, POB 6, Beit-Dagan,
RL   NA 50250, Israel
XX
DR   MD5; 0a94e06747fee220f7fa921279be2aef.
XX
CC   ##Assembly-Data-START##
CC   Assembly Method       :: Assembly Analysis pipline for SOLiD v.
CC                            v.2.0
CC   Sequencing Technology :: SOLiD
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1312
FT                   /organism="Citrullus lanatus cryptic virus"
FT                   /host="Citrullus lanatus Thunb"
FT                   /mol_type="genomic RNA"
FT                   /country="Israel"
FT                   /collection_date="Aug-2011"
FT                   /db_xref="taxon:1295012"
FT   gene            39..1286
FT                   /gene="RdRp"
FT   CDS             39..1286
FT                   /codon_start=1
FT                   /gene="RdRp"
FT                   /product="RNA-dependent RNA polymerase"
FT                   /db_xref="GOA:M4PXL0"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:M4PXL0"
FT                   /protein_id="AGH12859.1"
FT                   /translation="MNISPLLYEQCLSGWSRSYYLHDKHMQAIIQYGYKDVPISSINDR
FT                   LYKECVHEVQNRLSSLPRVRALDVLSELDSVTFKSSSAAGYDYIGAKGPKGGENHTRAM
FT                   SRAKAIMWSIAETGETGMKHAIETAVPDVGYTRTQLADITEKTKVRHVWGRAFHYILLE
FT                   GLTADPLIRAVQRADTFIHIGKDPTVSVPRLLSDTAEQCKWLYALDWKQFDATVSRFEI
FT                   EAAFDIVLNLLDFPNRETKLMFELSKQLFIHKKIAAPDGKIYWAHKGIPSGSYFTSIIG
FT                   SIINRTEILMLWRTITGHGPIVCYTQGDDSLCGDNILIPPERFAMVANPIGWYFNQEKT
FT                   EYSTIPELITFLGRSYAGGLNKRDLKRCLRLLIFPEYPVESGRISAYRAQSISDDVGGL
FT                   GDVLNKLADRLRRSIP"
XX
SQ   Sequence 1312 BP; 413 A; 264 C; 283 G; 352 T; 0 other;
     caacctagga atgttcgtta caatgttgag accaactcat gaatataagt ccattattgt        60
     atgagcagtg cctttctgga tggtcacgaa gttactatct acatgataag cacatgcaag       120
     caatcataca atacggatac aaagatgtac ctatatcctc aataaacgat cgactctaca       180
     aagagtgcgt tcatgaggtt cagaataggt taagtagcct tccacgtgtg agggctttag       240
     acgttctgtc cgaactagac agtgtcacgt tcaagtcgtc ctcagcggcg ggctatgatt       300
     acattggtgc gaaaggtcca aaaggtggtg aaaatcacac acgggctatg tcgagagcca       360
     aggcaataat gtggtccatc gccgagacag gcgagacagg catgaaacat gccattgaga       420
     ctgctgttcc agacgttggc tacacacgca cacaactggc agacattacc gaaaagacaa       480
     aagtacgaca tgtatggggt cgcgcattcc attatatttt acttgaagga ttaacagctg       540
     atccactgat cagagcagtt cagagagctg acacgttcat ccatatcggt aaagatccga       600
     cagttagtgt acccagatta ctatcagaca cagctgagca atgcaaatgg ttatatgctt       660
     tagattggaa acaatttgat gcaaccgtta gccggtttga aattgaagct gcattcgata       720
     tcgttctcaa ccttctagac tttcctaaca gagagacaaa actgatgttt gagctttcga       780
     agcaactctt tattcacaag aaaattgctg ctcctgatgg caaaatctat tgggcacaca       840
     aaggaatccc ttctgggagt tactttacat ccataattgg ttcaattatt aacagaaccg       900
     aaattcttat gctatggaga actattacag gtcacggacc aattgtatgt tatacacaag       960
     gtgatgattc actttgcgga gacaacattc tgattccacc tgagaggttc gcaatggtag      1020
     caaacccaat tggttggtat ttcaaccaag agaagaccga atattcaact attccggaat      1080
     taattacttt cctaggacgt tcatacgccg gaggacttaa taagagagac ttaaagagat      1140
     gtttaagact tttgatattt cctgaatatc cagttgaatc cggaaggatt tcagcttatc      1200
     gagcacaatc aatatctgac gatgttggtg gtttaggcga tgttctaaac aaattagcag      1260
     ataggctaag acgcagtata ccttaacgaa gacttctaat ggagatagtt at              1312
//