ID KC428753; SV 1; linear; genomic DNA; STD; VRL; 2781 BP. XX AC KC428753; XX DT 03-APR-2013 (Rel. 116, Created) DT 03-APR-2013 (Rel. 116, Last updated, Version 1) XX DE Tomato yellow leaf curl virus isolate KSQ1-3, complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RA Wang X.G., Du Y.J., Huang J.F.; RT "Genomic characterization of Tomato yellow leaf curl virus infecting RT brinjaul in Xinjiang"; RL Unpublished. XX RN [2] RP 1-2781 RA Wang X.G., Du Y.J., Huang J.F.; RT ; RL Submitted (31-DEC-2012) to the INSDC. RL College of Agriculture, Shi Hezi University, Xinjiang Shihezi City North RL Four Road, Shi Hezi, Xin Jiang 832000, China XX DR MD5; 85b0b26738167933a99a8a3d6cd24d21. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="Tomato yellow leaf curl virus" FT /host="brinjaul" FT /isolate="KSQ1-3" FT /mol_type="genomic DNA" FT /country="China:Kashi, Xinjiang" FT /collected_by="Du Yejuan" FT /collection_date="23-Jan-2012" FT /db_xref="taxon:10832" FT gene 314..664 FT /gene="AV2" FT CDS 314..664 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:M4XZL5" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:M4XZL5" FT /protein_id="AGI37677.1" FT /translation="MWDPLLNEFPESVHGFRCVLAIKYLQSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT PEAQNIQNVSKP" FT gene 474..1250 FT /gene="AV1" FT CDS 474..1250 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:M4YIP8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:M4YIP8" FT /protein_id="AGI37678.1" FT /translation="MSKRPGDIIISTPVSKVRRKLNFDSPYSSRAAVPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIRHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDN FT EPSTATVKNDLRDMFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT gene complement(1247..1651) FT /gene="AC3" FT CDS complement(1247..1651) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:M4Y121" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:M4Y121" FT /protein_id="AGI37679.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI FT ISIQIRFNHNIRKILGIHKCFLNFRIWTTLQPQTGRFLRVFRYQVLKYLDTLGVISINN FT VIRAVDHVLYDVLENTINVTETHDIKYKFY" FT gene complement(1392..1799) FT /gene="AC2" FT CDS complement(1392..1799) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:E5FXK7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E5FXK7" FT /protein_id="AGI37680.1" FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVDLDCGCSYYLHI FT NCNNHGFTHRGTHHCSSSREWRFYLGDKQSPLFQDNRTQPEAISNEPRHHFHSDKIQPQ FT HQEDIGDSQMFSQLPNLDDITASDWSFLKSI" FT gene complement(1708..2781) FT /gene="AC1" FT CDS complement(1708..2781) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:I6WJ40" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:I6WJ40" FT /protein_id="AGI37681.1" FT /translation="MPRLFTIYAKNYFLTYPNCSLSKEEALSQLKNLETPTNKKYIKVC FT RELHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQAAKSSTDVKTYVEK FT DGDFIDFGVFQIDGRSARGGQQSANDAYAEALNSGSKSEALNILKEKAPKDYILQFHNL FT SSNLDRIFSPPLDVYVSPFLSSSFNQVPDELEEWVAENVVSSAARPWRPISIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFITLYEPLFA FT SINQGPTQDSQEETNKA" FT gene complement(2337..2630) FT /gene="AC4" FT CDS complement(2337..2630) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:I6XPQ0" FT /protein_id="AGI37682.1" FT /translation="MGNHISMCLSNSKESTNVRTNGSSTWYPQTGQHISIRTFRQLRAQ FT QMSRPTWRKTETSLILEFSKSMADQLEEVSNLPTTHMPRHSIQAVNPRPSIY" XX SQ Sequence 2781 BP; 755 A; 530 C; 612 G; 884 T; 0 other; gttgaaatga attggtgtcc ctcaaagctc tatggcaatc ggtgtatcgg tgtcttactt 60 atacctggac acctaatggc tatttggtaa ttttgtaaaa gtacattgca atacaaaatt 120 caaaattcaa aaatcaaatc attaaagcgg ccatccgtat aatattaccg gatggccgcg 180 ccttttcttt ttatgtggtc cccacgaggg ttccacagac gtcactgtca accaatcaaa 240 ttccatcctc aaacgttaga taagtgttca tttgtcttta tatacttggt ccccaagtag 300 tttgtcttgc actatgtggg atccacttct aaatgaattt cctgaatctg ttcacggatt 360 tcgttgtgtg ttagctatta aatatttgca gtccgttgag gaaacttatg agcccaatac 420 attgggccac gatttaatta gggatcttat atctgttgta agggcccgtg actatgtcga 480 agcgaccagg cgatataatc atttccacgc ccgtctcgaa ggttcgccga aagctgaact 540 tcgacagccc atacagcagc cgtgctgctg tccccattgt ccaaggcaca aacaagcgac 600 gatcatggac gtacaggccc atgtaccgga agcccagaat atacagaatg tatcgaagcc 660 ctgatgttcc tcgtggatgt gaaggcccat gtaaagtcca gtcttatgag caacgggatg 720 atattaggca tactggtatt gttcgttgtg ttagtgatgt tactcgtgga tctggaatta 780 ctcacagagt gggtaagagg ttttgtgtta aatcgatata ttttttaggt aaagtctgga 840 tggatgaaaa tatcaagaag cagaatcaca ctaatcaggt catgttcttc ttggttcgtg 900 atagaaggcc ctatggaaac agcccaatgg attttggaca ggtttttaat atgttcgata 960 atgagcccag taccgcaact gtgaagaatg atttgcggga tatgtttcaa gtgatgagga 1020 aatttcatgc tacagttatt ggtgggccct ctggaatgaa ggaacaggca ttagttaaga 1080 gattttttag aattaacagt catgtaactt ataatcatca ggaggcagcc aagtacgaga 1140 accatactga aaacgccttg ttattgtata tggcatgtac gcatgcctct aatccagtgt 1200 atgcaactat gaaaatacgc atctatttct atgattcaat atcaaattaa taaaatttat 1260 attttatatc atgagtttct gttacattta ttgtgttttc aagtacatca tacaatacat 1320 gatcaactgc tctgattaca ttgttaattg aaattacacc aagagtatct aaatacttaa 1380 gaacttgata tctaaatact cttaagaaac gaccagtctg aggctgtaat gtcgtccaaa 1440 ttcggaagtt gagaaaacat ttgtgaatcc ccaatatctt cctgatgttg tggttgaatc 1500 ttatctgaat ggaaatgatg tcgtggttca ttagaaatgg cctctggctg tgttctgtta 1560 tcttgaaata gaggggattg tttatctccc agataaaaac gccattctct gcttgaggag 1620 cagtgatgag ttcccctgtg cgtgaatcca tgattgttgc agttgatgtg gaggtagtat 1680 gagcagccac agtctaggtc tacacgctta cgccttattg gtttcttctt ggctatcttg 1740 tgttggacct tgattgatac ttgcgaacag tggctcgtag agggtgatga aggttgcatt 1800 cttgagagcc caatttttca aggatatgtt tttttcttcg tctagatatt ccctatatga 1860 ggaggtaggt cctggattgc agaggaagat agtgggaatt ccccctttaa tttgaatggg 1920 cttcccgtac tttgtgttgc tttgccagtc cctctgggcc cccatgaatt ccttgaagtg 1980 ctttaaataa tgcgggtcta cgtcatcaat gacgttgtac cacgcatcat tactgtacac 2040 ctttgggctt aggtctagat gtccacataa ataattatgt gggcctagag acctggccca 2100 cattgtcttg cctgttctgc tatcaccctc aatgacaata cttatgggtc tccatggccg 2160 cgcagcggaa gatacgacgt tctcggcgac ccactcttca agttcatctg gaacttgatt 2220 aaaagaagaa gaaagaaatg gagaaacata aacgtctaaa ggaggactaa aaatcctatc 2280 taaatttgaa cttaaattat gaaattgtaa aatatagtcc tttggggcct tctcttttaa 2340 tatattgagg gcctcggatt tactgcctga attgagtgcc tcggcatatg cgtcgttggc 2400 agattgctga cctcctctag ctgatctgcc atcgatttgg aaaactccaa aatcaatgaa 2460 gtctccgtct ttctccacgt aggtcttgac atctgttgag ctcttagctg cctgaatgtt 2520 cggatggaaa tgtgctgacc tgtttgggga taccaggtcg aagaaccgtt ggttcttaca 2580 ttggtacttt ccttcgaatt ggataagcac atggagatgt ggttccccat tctcgtggag 2640 ttctctgcaa actttgatgt attttttatt tgttggggtt tctaggtttt ttaattggga 2700 aagtgcttcc tctttagaga gagaacaatt gggatatgtt aggaaataat ttttggcata 2760 tattgtaaat aaacgaggca t 2781 //