ID   KC407999; SV 1; linear; genomic RNA; STD; VRL; 2205 BP.
XX
AC   KC407999;
XX
DT   31-MAR-2013 (Rel. 116, Created)
DT   31-MAR-2013 (Rel. 116, Last updated, Version 1)
XX
DE   Cucumber mosaic virus strain Hnt segment RNA3, complete sequence.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2205
RA   Jin D.W.;
RT   ;
RL   Submitted (20-DEC-2012) to the INSDC.
RL   Huazhong Agriculture University, Plant Institute of Science and Technology,
RL   Shizishan Street No. 1, Wuhan, Hubei 430070, China
XX
DR   MD5; 0977e184996a863ef2590b337c782efb.
XX
CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2205
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /host="tobacco"
FT                   /strain="Hnt"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collected_by="Z.P. Luo"
FT                   /collection_date="26-May-2011"
FT                   /note="subgroup: II"
FT                   /db_xref="taxon:12305"
FT   CDS             98..937
FT                   /codon_start=1
FT                   /product="3a"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q91TW4"
FT                   /protein_id="AGI04299.1"
FT                   /translation="MAFQGTSRTLTQQSSAASSDDLQKILFSPDAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPQVTSNNLLSFFKSGYDAGELRSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLKIYLADLGDKELSPIDGQCVTLHNHDLPALISFQPTYDCPMELVGNRHRCFAVVVE
FT                   RHGYIGYGGTTASVCSNWQAQFSSKNNNYTHAAAGKTLVLPYNRLAEHSKPSAVARLLK
FT                   SQLNNVSSSRYLLPNVALNQNASGHESEILNESPPIAIGSPSASRNNSFRSQVVNGL"
FT   CDS             1224..1880
FT                   /codon_start=1
FT                   /product="CP"
FT                   /db_xref="GOA:Q9WA74"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q9WA74"
FT                   /protein_id="AGI04300.1"
FT                   /translation="MDKSGSPNASRTSRRRRPRRGSRSASGADAGLRALTQQMLRLNKT
FT                   LAIGRPTLNHPTFVGSESCKPGYTFTSITLKPPEIEKGSYFGRRLSLPDSVTDYDKKLV
FT                   SRIQIRINPLPKFDSTVWVTVRKVPSSSDLSVAAISAMFGDGNSPVLVYQYAASGVQAN
FT                   NKLLYDLTEMRADIGDMRKYAVLVYSKDDKLEKDEIVLHVDVEHQRIPISRMLPT"
XX
SQ   Sequence 2205 BP; 505 A; 521 C; 521 G; 658 T; 0 other;
     gtaatcttac cactttcttt cacgtcgtgt cgcgtcagtc cacgcagtgt gtgtgcgtgt        60
     gtgttagtta gtgtgtcgtg tttagattac gaaggttatg gctttccaag gtaccagtag       120
     gactttaact caacagtcct cggcggcgtc gtctgacgac ttacagaaga tattattcag       180
     ccccgatgcc atcaagaaga tggctactga gtgtgaccta ggtcgacatc attggatgcg       240
     cgcggataac gccatctctg tcagacctct cgttccccaa gtaaccagta acaatttatt       300
     gtccttcttt aaatctgggt atgatgccgg tgaattgcgc tctaaaggct atatgagcgt       360
     tcctcaagta ctgtgtgccg ttaccaggac ggtttctacg gatgctgagg gttctttgaa       420
     aatttatttg gctgacctag gtgataaaga attatcccca attgatgggc agtgtgttac       480
     tttacataat catgatcttc ctgctttgat atctttccaa cctacctacg attgccccat       540
     ggaattagtt ggcaatcggc atcgatgttt cgcggtagtc gttgagagac atggttatat       600
     tggttacggt ggtaccactg ctagcgtgtg tagtaactgg caagcccagt tttcttcaaa       660
     gaataataat tacacgcacg ccgctgctgg taagactctt gtgttgcctt acaacagatt       720
     agctgagcat tcgaaaccgt cagccgtcgc tcgcctgttg aagtcgcagt taaacaacgt       780
     tagctcatcg cgctatcttt tgccgaacgt tgctcttaat caaaatgcgt ctgggcacga       840
     gtccgagatt ttaaacgaaa gccctcccat cgctataggg agtccgtccg cgtcccgtaa       900
     caatagcttc agatcgcagg tggttaacgg tctttagtgt tttgttacgt tgtacctatg       960
     tatatatata ctacgtttat cttccgtatg taaatacatg tgagtctaga gtcccgtgtg      1020
     agttgtaacg gtagacatct gtgacgcgaa gccgcctgaa gatttcccat ctggggttag      1080
     taagtccaca tcacagtttt aaggttcaat tccttttgct ccctgttggg ccccttactt      1140
     tctcatggat gcttctccgc gagttagcgt ttagttgttt acctgagtcg tgcgttttct      1200
     ttgttttgcg tcttagtgta atcatggaca aatctggatc tcccaatgct agtagaacct      1260
     cccggcgtcg tcgcccgcgt agaggttctc ggtccgcttc tggtgcggat gcagggttgc      1320
     gtgctttgac tcagcagatg ctgagactca ataaaaccct cgccattggt cgtcccactc      1380
     ttaaccaccc aaccttcgtg ggtagtgaaa gctgtaaacc cggttacact ttcacatcta      1440
     ttaccctgaa accgcctgaa attgaaaaag gttcatattt tggtagaagg ttgtctttgc      1500
     cagattcagt cacggactat gataagaagc ttgtttcgcg cattcaaatc aggattaatc      1560
     ctttgccgaa atttgattct accgtgtggg ttacagttcg gaaagtacct tcatcatccg      1620
     atctttccgt cgccgccatc tctgctatgt ttggcgatgg taactcaccg gttttggttt      1680
     atcagtatgc tgcgtccgga gttcaggcca acaataagtt actttatgac ctgaccgaga      1740
     tgcgtgctga tatcggcgac atgcgtaagt acgccgtcct ggtttactcg aaagacgata      1800
     aactagagaa ggacgagatt gtacttcatg tcgacgtcga gcatcaacga attcctatct      1860
     cacggatgct cccgacttag tccgtgtgtt taccggcgtc cgaagacgtt aaactacact      1920
     ctcaatcgcg agtgctgagt tggtagtatt gcttcaaact gcctgaagtc tctaaacgtg      1980
     ttgttgcacg gggaacgggt tgtccatcca gcttacggct aaaatggtca gtcatgcctc      2040
     aaaggcatgc cgacacctta caaggttgtc gaggtaccct tgaaatcatc tcctagattt      2100
     cttcggaagg gcttcgtgag aagctcgtgc acggtgatac actgatatca ccaagagtgc      2160
     gggtatcgcc cctgtgtttt ccacaggttc tccataagga gacca                      2205
//