Dbfetch

Dbfetch

ID   KC404909; SV 1; linear; genomic RNA; STD; VRL; 582 BP.
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AC   KC404909;
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DT   06-MAY-2013 (Rel. 116, Created)
DT   04-JUN-2014 (Rel. 121, Last updated, Version 2)
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DE   Apple chlorotic leaf spot virus isolate LF-2 coat protein gene, complete
DE   cds.
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KW   .
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OS   Apple chlorotic leaf spot virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae; Trichovirus.
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RN   [1]
RP   1-582
RX   PUBMED; 24318575.
RA   Chen S., Zhou Y., Ye T., Hao L., Guo L., Fan Z., Li S., Zhou T.;
RT   "Genetic variation analysis of apple chlorotic leaf spot virus coat protein
RT   reveals a new phylogenetic type and two recombinants in China";
RL   Arch. Virol. 159(6):1431-1438(2014).
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RN   [2]
RP   1-582
RA   Chen S., Zhou Y., Ye T., Hao L., Zhou T.;
RT   ;
RL   Submitted (20-DEC-2012) to the INSDC.
RL   State Key Laboratory for Agrobiotechnology, China Agricultural University,
RL   No. 2, Yuanmingyuan West Road, Beijing 100193, China
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DR   MD5; 9c55591fc343ceba85680657aff9b94d.
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CC   ##Assembly-Data-START##
CC   Assembly Method       :: DNAMAN v. 5.2.2
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..582
FT                   /organism="Apple chlorotic leaf spot virus"
FT                   /host="apple"
FT                   /isolate="LF-2"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:12175"
FT   CDS             1..582
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:N0BL00"
FT                   /db_xref="InterPro:IPR008879"
FT                   /db_xref="UniProtKB/TrEMBL:N0BL00"
FT                   /protein_id="AGK64060.1"
FT                   /translation="MAAVLNLQLKVDADLKAFLAAEGRPLHGKTGAILEQTLEAIFANI
FT                   AIQGTSEQTEFLDVLVEVKSMEVQKVVGSFNLKEVVNLIKIFRSTSSVPNISNMTFRQV
FT                   CEAFAPEARNGLVKLKYKGVFTNLFFTMPEVGGKYPELMFDFNKGLNMFIMNKAQQKVI
FT                   TNMNRRLLQTEFAKSENEAKMSSVTTDLCV"
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SQ   Sequence 582 BP; 166 A; 118 C; 157 G; 141 T; 0 other;
     atggcggcag tgctgaatct tcagttaaag gtggacgcag atctgaaagc gttcctggcc        60
     gcagaaggca gaccccttca tggaaagaca ggggcaatcc tggaacagac actggaggcc       120
     atcttcgcga acatagcgat acagggcacc tcggagcaaa cggagtttct ggacgtgctg       180
     gtggaggtga aatctatgga ggtccagaag gtggtgggtt cattcaatct gaaggaggta       240
     gtcaatttaa tcaagatttt caggtctaca tcttcggtcc cgaacataag caatatgacc       300
     ttccgccagg tgtgtgaggc atttgctccc gaagcaagaa atgggctcgt caagctgaag       360
     tacaaagggg ttttcacaaa cctctttttt acgatgcctg aagttggcgg caagtacccg       420
     gagcttatgt ttgatttcaa taagggcctg aatatgttca taatgaacaa ggcccagcaa       480
     aaagtgataa ccaatatgaa tcggcgtctt ttacaaactg aatttgcaaa gagcgagaat       540
     gaggcaaaaa tgtcgtctgt tacgactgat ctttgcgttt ag                          582
//