ID KC312673; SV 1; circular; genomic DNA; STD; VRL; 2781 BP. XX AC KC312673; XX DT 24-MAR-2013 (Rel. 116, Created) DT 24-MAR-2013 (Rel. 116, Last updated, Version 1) XX DE Tomato yellow leaf curl virus isolate ZJ-NB, complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RA Xue D., Li J., Xu X.; RT "Phylogenetic analysis and application of multiplex PCR in detection of RT Tomato yellow leaf curl virus in China"; RL Unpublished. XX RN [2] RP 1-2781 RA Xue D., Li J., Xu X.; RT ; RL Submitted (07-DEC-2012) to the INSDC. RL College of Horticulture, Northeast Agricultural University, No. 59, MuCai RL Road, Harbin, Hei Longjiang 150030, China XX DR MD5; d0492c1c381995bc6eb2eed22bed2278. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="Tomato yellow leaf curl virus" FT /host="Solanum lycopersicum" FT /isolate="ZJ-NB" FT /mol_type="genomic DNA" FT /country="China:ZheJiang, NingBo" FT /collection_date="20-Sep-2012" FT /db_xref="taxon:10832" FT gene 148..498 FT /gene="AV2" FT CDS 148..498 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:M4QHE1" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:M4QHE1" FT /protein_id="AGH27857.1" FT /translation="MWDPLLNEFHQSVHGFRCMLAIKYLRAVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT PEAQNIQNVSKP" FT gene 308..1084 FT /gene="AV1" FT CDS 308..1084 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:M4QUI3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:M4QUI3" FT /protein_id="AGH27858.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNSDSPYSSRAAVPIVQGTNKQRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSEITH FT RVGKRFCVKSIYFLRKVWMDENIKKQNHTNQVMFFLVRDRRSYGNSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVISGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASSPVYATMKIRIYFYDSISN" FT gene complement(1081..1485) FT /gene="AC3" FT CDS complement(1081..1485) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:M4QJV5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:M4QJV5" FT /protein_id="AGH27859.1" FT /translation="MDSHTGELITAPQAENGVFIREINNPLYFKITEHSQRPFLMTHDI FT ISIQIRFNHNIRKVLGIHKCFLNFRIWTTLQPQTGRFLRVFRYQVLKYLDSLGVISINN FT VIRAVDHVLYDVLENTINVTETHDIKYKFY" FT gene complement(1226..1633) FT /gene="AC2" FT CDS complement(1226..1633) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:M4QL86" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:M4QL86" FT /protein_id="AGH27860.1" FT /translation="MQPSSPSTSHCSQVSIKVQYKIAKKKPIRRKRVDLDCGYSYYLHI FT NCNNHGFTHRGTHHCSSSREWRFYPGDKQSPLFQDNRTQPEAISNDPRHHFHSDKIQPQ FT HQEGVGDSQMFSQLPNLDDITASDWSFLKSI" FT gene complement(1542..2615) FT /gene="AC1" FT CDS complement(1542..2615) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:M4QHL0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:M4QHL0" FT /protein_id="AGH27861.1" FT /translation="MPRLFKIYAKNYFLTYPNCSLSKEEALSQLKNLETPINKKYIKVC FT RELHENGEPHLHVLIQFEGKYQCKGQRFFDLVSPNRSAHFHPNIQAAKSSTDVKTSVEK FT DGDFIDFGVFQIDVRSARGGQQSANAAYAEALNSGSKSEALNILKEKAPKDYILQFHNL FT SSNLDRIFSPPLEVYVSPFLSYSFNQVPDELEEWVAENVVSSGARPWRPISIVIEGDSR FT TGKTMWARSLGPHNYLCGRLDLSLKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKRIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFVTLYEPLFT FT SINQGPIQDSQEETHKA" FT gene complement(2171..2464) FT /gene="AC4" FT CDS complement(2171..2464) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:M4QHE4" FT /protein_id="AGH27862.1" FT /translation="MGNHISMCLSNSKANTNVRANGSLTWYPQTGQHISILTFRQLRAQ FT QMSRPPWKKTETSLILEFSKSMSDQLEEVSNLPTPHMPRHSIQAVNPRPSIY" XX SQ Sequence 2781 BP; 765 A; 532 C; 608 G; 875 T; 1 other; accggatggc cgcgcctttt ctttttatgt ggtccccatg agggttccac agacgtcact 60 gtcaaccaat caaattgcat cctcaaacgt tagataagtg tttatttgtc tttatatact 120 tggtccccaa gtagtttgtc ttgcaatatg tgggatccac ttctaaatga atttcatcag 180 tctgttcacg gatttcgttg tatgttagct attaaatatt tgcgggccgt tgaggaaact 240 tacgagccca atacattggg ccacgattta attcgggatc ttatatctgt tgtaagggcc 300 cgtgactatg tcgaagcgac caggcgatat aatcatttcc acgcccgtct cgaaggttcg 360 ccgaaggctg aactccgaca gcccatacag cagccgtgct gctgtcccca ttgtccaagg 420 cacaaacaag caacgatcat ggacgtacag gcccatgtac cggaagccca gaatatacag 480 aatgtatcga agccctgatg ttcctcgtgg atgtgaaggc ccatgtaaag tgcagtctta 540 tgagcaacgg gatgatatta agcatactgg tattgtacgt tgtgttagtg atgttactcg 600 tggatctgaa attacccaca gagtgggtaa gaggttctgt gttaaatcga tatatttttt 660 acgtaaagtc tggatggatg aaaatattaa gaagcagaat cacactaatc aggtcatgtt 720 cttcttggtt cgtgatagaa ggtcctatgg aaacagccca atggattttg gacaggtttt 780 taatatgttc gataatgagc ccagtactgc aaccgtgaag aatgatttgc grgataggtt 840 tcaagtgatg aggaaatttc atgctacagt tattagtggg ccctctggaa tgaaggaaca 900 ggcattagtt aagagatttt ttagaattaa cagtcacgta acttataacc atcaggaggc 960 agccaagtat gagaaccata ctgaaaacgc cttgttattg tatatggcat gtacgcatgc 1020 ctctagtcca gtgtatgcaa ctatgaaaat acgcatctat ttctatgatt caatatcaaa 1080 ttaataaaat ttatatttta tatcatgagt ttctgttaca tttattgtgt tttcaagtac 1140 atcatacaat acatgatcaa ctgctctgat tacattatta atggaaatta caccaagact 1200 atctaaatac ttaagaactt gatatctaaa tactcttaag aaacgaccag tctgaggctg 1260 taatgtcgtc caaattcgga agttgagaaa acatttgtga atccccaaca ccttcctgat 1320 gttgtggttg aatcttatct gaatggaaat gatgtcgtgg gtcattagaa atggcctctg 1380 gctgtgttct gttatcttga aatagagggg attgtttatc tcccggataa aaacgccatt 1440 ctctgcttga ggagcagtga tgagttcccc tgtgtgtgaa tccatgattg ttgcagttga 1500 tgtggaggta gtatgagtag ccacagtcta ggtctacacg cttacgcctt atgggtttct 1560 tcttggctat cttgtattgg accttgattg atacttgtga acagtggctc gtagagggtg 1620 acgaaggttg cattcttgag agcccaattt ttcaaggata tgtttttttc ttcgtctaga 1680 tattccctat atgaggaggt aggtccagga ttgcagagga agatagtggg aattccccct 1740 ttaatttgaa tgcgcttccc gtactttgtg ttgctttgcc agtccctctg ggcccccatg 1800 aattccttga agtgctttaa ataatgcggg tctacgtcat caatgacgtt gtaccacgca 1860 tcattactgt acacctttag gcttaggtct agacgtccac ataaataatt atgtgggcct 1920 agagacctgg cccacatagt tttgcctgtt ctgctatcac cctcaatgac aatacttatg 1980 ggtctccatg gccgcgcacc ggaagatacg acgttctcgg cgacccactc ttcaagttca 2040 tctggaactt gattaaaaga ataagaaaga aatggagaaa cataaacttc taaaggagga 2100 ctaaaaatcc tatctaaatt tgaacttaaa ttatgaaatt gtaaaatata gtcctttggg 2160 gccttctctt ttaatatatt gagggcctcg gatttactgc ctgaattgag tgcctcggca 2220 tatgcggcgt tggcagattg ctgacctcct ctagctgatc tgacatcgat ttggaaaact 2280 ccaaaatcaa tgaagtctcc gtctttttcc acggaggtct tgacatctgt tgagctctta 2340 gctgcctgaa tgttaggatg gaaatgtgct gacctgtttg gggataccag gtcaaagaac 2400 cgttggccct tacattggta tttgccttcg aattggataa gcacatggag atgtggttcc 2460 ccattctcgt ggagttctct gcaaactttg atgtattttt tatttattgg ggtttctagg 2520 ttttttaatt gggaaagggc ttcctcttta gagagcgaac aattgggata tgttaggaaa 2580 taatttttgg catatatttt aaataaacga ggcatgttga aatgaattgg tgtccctcaa 2640 agctctatgg caatcggtgt atcggtgtct tacttatacc tggacaccta atggctattt 2700 ggtaattttg taaaagtaca attcaattca aaattcaaaa ttcaaaaatc aaatcattaa 2760 agcggccatc cgtataatat t 2781 //