ID KC312672; SV 1; circular; genomic DNA; STD; VRL; 2781 BP. XX AC KC312672; XX DT 24-MAR-2013 (Rel. 116, Created) DT 24-MAR-2013 (Rel. 116, Last updated, Version 1) XX DE Tomato yellow leaf curl virus isolate ZJ-JX, complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RA Xue D., Li J., Xu X.; RT "Phylogenetic analysis and application of multiplex PCR in detection of RT Tomato yellow leaf curl virus in China"; RL Unpublished. XX RN [2] RP 1-2781 RA Xue D., Li J., Xu X.; RT ; RL Submitted (07-DEC-2012) to the INSDC. RL College of Horticulture, Northeast Agricultural University, No. 59, MuCai RL Road, Harbin, Hei Longjiang 150030, China XX DR MD5; 2625f8d2ace3ef3e353d7fd9a201bf07. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="Tomato yellow leaf curl virus" FT /host="Solanum lycopersicum" FT /isolate="ZJ-JX" FT /mol_type="genomic DNA" FT /country="China:ZheJiang, JiaXing" FT /collection_date="17-Sep-2012" FT /db_xref="taxon:10832" FT gene 148..498 FT /gene="AV2" FT CDS 148..498 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:M4QHK1" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:M4QHK1" FT /protein_id="AGH27851.1" FT /translation="MWDPLLNEFPESIHGFRCMLAIKYLQSVEETYQPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSRKAELRQPIQQPCCCPHCPRHKQATNMDVQAHV FT PEGQNIQNVSKP" FT gene 308..1084 FT /gene="AV1" FT CDS 308..1084 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:M4QHD6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:M4QHD6" FT /protein_id="AGH27852.1" FT /translation="MSKRPGDIIISTPASKVRGRLNFDSPYSSRAAVPIVQGTNKRRTW FT TYRPMYRKARIYRMYRSPDVPRGCEGPCKVQSHAHLDDIKHTGIVGCVSDVTRGSGITH FT RMGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRYRRPYGNSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHAPVIGGPSGMKEQALVKRYFRINSHVTYNHQEAAKYD FT NHTENALLLYMACTYASNPVYATMKIRIYFYDSISN" FT gene complement(1081..1485) FT /gene="AC3" FT CDS complement(1081..1485) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:M4QUH9" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:M4QUH9" FT /protein_id="AGH27853.1" FT /translation="MDSRTGELITAPQAENGVFIWEIKDLVYFKITEHSQRPFLMNNDI FT ISIQIRFNHNIRKALGIHKCFLNFRIWTTLQPQTGRFLRVFRYQVLKYLYSLGVISINN FT VIRAVDHMNRDVLENTINVTATHDIKYKFY" FT gene complement(1226..1633) FT /gene="AC2" FT CDS complement(1226..1633) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:M4QJV1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:M4QJV1" FT /protein_id="AGH27854.1" FT /translation="MQSSSPSTSHCSQVSIKVQRQIAKKKPIRRKRVDLDSGCSYYLHI FT NCNNHGFTHRGTHHCSSSREWRFYMGDKRSRIFQDNRTQPAAVSNEQRHHFHSDKIQPQ FT HQEGIGDSQMFSELPNLDDITASDWSFLKSI" FT gene complement(1542..2615) FT /gene="AC1" FT CDS complement(1542..2615) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:M4QL84" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:M4QL84" FT /protein_id="AGH27855.1" FT /translation="MPRLFKIYAKNYFLTYPNCSLSKEDALSQLKNLETPTNKKYIKVC FT RELHENGEPHLHVLIQFEGKYQCKNHRFFDLVSPNRSAHFHPNIQPAKSSTDVKTYVEK FT DGDFIDFGVFQIDSRSARGGQQSANDVYAEALNSGSKSEALNILKEKAPKDYILQFHNL FT SSNLDRIFSPPLEVYISPFLSSSFNQVPDELDEWVAENVVSSAARPWRPISIVIEGDSR FT TGKTMWARSLGQHNYLCGHLDLSPKVYSNDVWYKVIDDVDPHYLKHFKEFMGAQRDWQS FT NTEYGKPIQIKGGIPTIFLCDPGPTSSYREYLDEEKNISLKNWALKNAIFVTLYEPLFA FT SINQGPTPDCQEETNKA" FT gene complement(2171..2464) FT /gene="AC4" FT CDS complement(2171..2464) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:M4QHK5" FT /protein_id="AGH27856.1" FT /translation="MGNHISMCLSNSKANTNVRTIGSSTWYPQTGQHISIRTFSQLRAQ FT QMSRPTWRKTETSLILEFSKSIADRLEEVSNLPTTYMPRHSIQAVNPRPSIY" XX SQ Sequence 2781 BP; 758 A; 541 C; 602 G; 880 T; 0 other; accggatggc cgcgccttct ctttttatgt ggtccccacg agggttccac atacgtcact 60 gtcaaccaat caaattgcat cctcaaacgt tagataagtg ttcatttgtc tttatatact 120 tggtccccaa gtagtctgtc ttgcaatatg tgggatccac ttctaaatga atttcctgaa 180 tctattcacg gatttcgttg tatgttagct attaaatatt tgcagtccgt tgaggaaact 240 taccagccca atacattggg ccacgattta attagggatc ttatatctgt tgtaagggcc 300 cgtgactatg tcgaagcgac caggcgatat aatcatttcc acgcccgcct cgaaggttcg 360 cggaaggctg aacttcgaca gcccatacag cagccgtgct gctgtcccca ttgtccaagg 420 cacaaacaag cgacgaacat ggacgtacag gcccatgtac cggaaggcca gaatatacag 480 aatgtatcga agccctgatg ttcctcgtgg atgtgaaggc ccatgtaaag tccagtctca 540 tgcgcatctg gatgatatta agcatactgg tattgttggt tgtgttagtg atgttactcg 600 tggatctgga attactcaca gaatgggtaa gaggttctgt gttaaatcga tatatttttt 660 aggtaaagtc tggatggacg aaaatatcaa gaagcagaat cacactaatc aggtcatgtt 720 cttcttggtt cgttatagaa ggccctatgg aaacagccca atggattttg gacaggtttt 780 taatatgttc gataatgagc ccagtaccgc aaccgtgaag aatgatttgc gggataggtt 840 tcaagtgatg aggaaatttc atgctccagt tattggtggg ccctctggaa tgaaggaaca 900 ggcattagtt aagagatatt ttagaattaa cagtcatgta acttataatc atcaggaggc 960 agccaagtat gacaaccata ctgaaaacgc cttgttattg tatatggcat gtacgtatgc 1020 ctctaatcca gtgtatgcaa ctatgaaaat acgcatctat ttctatgatt caatatcaaa 1080 ttaataaaat ttatatttta tatcatgagt tgctgttaca tttattgtgt tttcaagtac 1140 atctctgttc atatgatcaa ctgctctgat tacattgtta attgaaatta caccaagact 1200 atataaatac ttaagaactt gatatctaaa tactcttaag aaacgaccag tctgaggctg 1260 taatgtcgtc caaattcgga agttcagaaa acatttgtga atccccaatg ccttcctgat 1320 gttgtggttg aatcttatct gaatggaaat gatgtcgttg ttcattagaa acggccgctg 1380 gctgtgttct gttatcttga aatatacgag atcttttatc tcccatataa aaacgccatt 1440 ctctgcttga ggagcagtga tgagttcccc tgtgcgtgaa tccatgattg ttgcagttga 1500 tgtggaggta gtatgagcag ccactgtcta ggtctacacg cttacgcctt attggtttct 1560 tcttggcaat ctggcgttgg accttgattg atacttgcga acagtggctc gtagagggtg 1620 acgaagattg cattcttgag agcccaattt ttcaaggata tgtttttttc ttcgtctaga 1680 tattccctat atgaggaggt aggtcctgga tcgcagagga agatagtggg aattccccct 1740 ttaatttgaa tgggcttccc gtactctgtg ttgctttgcc agtccctctg ggcccccatg 1800 aattccttga agtgctttaa atagtgcggg tctacgtcat caatgacttt gtaccacaca 1860 tcattactgt acacctttgg gcttaggtct agatgtccac ataaataatt atgttggcct 1920 agagacctgg cccacattgt tttgcctgtt ctgctatcac cctcaatgac aatacttatg 1980 ggtctccatg gcctcgcagc ggaagatacg acgttctcgg cgacccactc gtcaagttca 2040 tctggaactt gattaaaaga agaagaaaga aatggagaaa tataaacttc taaaggagga 2100 ctaaaaatcc tgtctaaatt tgaacttaaa ttatgaaatt gtaaaatata gtcctttggg 2160 gccttctctt ttaatatatt gagggcctcg gatttactgc ctgaattgag tgcctcggca 2220 tatacgtcgt tggcagattg ctgacctcct ctagccgatc tgctatcgat ttggaaaact 2280 ccaaaatcaa tgaagtctcc gtctttctcc acgtaggtct tgacatctgt tgagctctta 2340 gctggctgaa tgttcggatg gaaatgtgct gacctgtttg gggataccag gtcgaagaac 2400 cgatggttct tacattggta tttgccttcg aattggataa gcacatggag atgtggttcc 2460 ccattctcgt ggagttctct gcaaactttg atgtattttt tatttgttgg ggtttctagg 2520 ttttttaatt gggaaagtgc atcctcttta gagagagaac aattgggata tgttaagaaa 2580 taatttttgg catatatttt aaataaacga ggcatgttga aatgaattgg tgtccctcaa 2640 agctctatgg caatcggtgt atcggtgtct tacttatacc tggacaccta atggctattt 2700 ggtaattttg taaaagtaca ttgcaattca acattcaaaa ttcaaaaatc aaatcaataa 2760 agcggccatc cgtataatat t 2781 //