ID KC312671; SV 1; circular; genomic DNA; STD; VRL; 2781 BP. XX AC KC312671; XX DT 24-MAR-2013 (Rel. 116, Created) DT 24-MAR-2013 (Rel. 116, Last updated, Version 1) XX DE Tomato yellow leaf curl virus isolate ZJ-HZ, complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RA Xue D., Li J., Xu X.; RT "Phylogenetic analysis and application of multiplex PCR in detection of RT Tomato yellow leaf curl virus in China"; RL Unpublished. XX RN [2] RP 1-2781 RA Xue D., Li J., Xu X.; RT ; RL Submitted (07-DEC-2012) to the INSDC. RL College of Horticulture, Northeast Agricultural University, No. 59, MuCai RL Road, Harbin, Hei Longjiang 150030, China XX DR MD5; 96fdc0cbcb7b4b25d99d6648b5396569. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="Tomato yellow leaf curl virus" FT /host="Solanum lycopersicum" FT /isolate="ZJ-HZ" FT /mol_type="genomic DNA" FT /country="China:ZheJiang, HangZhou" FT /collection_date="15-Sep-2012" FT /db_xref="taxon:10832" FT gene 148..498 FT /gene="AV2" FT CDS 148..498 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:M4QL76" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:M4QL76" FT /protein_id="AGH27845.1" FT /translation="MWDPLLNESPESVHGFRCMLAIKDLQSVEETYEPNTLGHDIIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPNAELRQPIQQPCCCPHCPRHKQATIMDVQAHV FT PEAQNIQNVSKP" FT gene 308..1084 FT /gene="AV1" FT CDS 308..1084 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:M4QHJ7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:M4QHJ7" FT /protein_id="AGH27846.1" FT /translation="MSKRPGDIIISTPASKVRRTLNFDSPYSSRAAVRIVQGTNKRRSW FT TCRPMYRKPRIYRMYRSPDVPRGCEGPCKVQFYEQRDDIKHTGIVRCVSDDTRGSGITH FT RVGKRFCVKWIYFLGKVWMDENIKKQNHTNQVMFFLVRHRRPYGNSPMDFGQVFNMIDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKVQALVKRFFRINSHVTYHHQEAAKYE FT NHTENALLLYMACPHASNPVYATMKIRIYFYDSISN" FT gene complement(1081..1485) FT /gene="AC3" FT CDS complement(1081..1485) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:M4QHD3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:M4QHD3" FT /protein_id="AGH27847.1" FT /translation="MDSRTGELITAPQAENGIFIWEINNPLYFKITEHSQRPFLMNNDI FT ISIQIRFNHNIRKAFGIHKCFLNFRIWTTLQPQTGRFLRVFRYQVLKYLDSLGVISINN FT VIRAVDYVLYDVLENTINVKATHDIKYKFY" FT gene complement(1226..1633) FT /gene="AC2" FT CDS complement(1226..1633) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:M4QUH5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:M4QUH5" FT /protein_id="AGH27848.1" FT /translation="MQSSSPSTSHCSQVSIKVQHNIAKKKPIRRKRVDLDCGSSCYLHI FT NCNNHGFTHRGTHHCSSSREWHFYLGDKQSPLFQDNRTQPEAIPNEQRHHFHSDKIQPQ FT HQEGIRDSQMFSQLPNLDDITASDWSFLKSI" FT gene complement(1542..2615) FT /gene="AC1" FT CDS complement(1542..2615) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:M4QJU8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:M4QJU8" FT /protein_id="AGH27849.1" FT /translation="MPRLFKIYAKNYFLTYPNCSHSKEEALSQLKNLETPTNKKCIKVC FT RELHENGEPHLHVLIQFEGKYQCKSQRFFDLVSPNRSAHFHPNIQAAKSSTDVKTYVEK FT DGDFIDFGVFQMDSRSARGGQQSANVAYAEALNSGSKSEALNILKEKAPKDYILQFHNL FT TSNLDRIFSPPLEVDVSPFLSSSFNQVPDELGEWAAENVVSSAARPWRPISIVIEGDSR FT TGKTMWARSIGPHNYLCGHLDLSPKVYSKDVWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYAKPIQIKGGIPTIFVCNPGPTSSYREYLDEEKNISLKNWALKNAIFVTLYEPLFA FT SINQGPTQYSQEETNKA" FT gene complement(2171..2464) FT /gene="AC4" FT CDS complement(2171..2464) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:M4QL79" FT /protein_id="AGH27850.1" FT /translation="MGNHISMCLSNSKANTNVRANGSSTWYPQTGQHISIRTFRQLRAQ FT PMSRPTWRKTETSLILEFSKWIADQLEEVSNLPTSHMPRHSIQAVNPRPSIY" XX SQ Sequence 2781 BP; 754 A; 537 C; 614 G; 876 T; 0 other; accggatggc cgcgcctttt ctttttatgt ggtccccaca agggttccac agacgtcact 60 gtcaaccaat caaattgcat cctcaaacgt tagataagtg ttcatttgtc tttatatact 120 tggtccccaa gtagtctgtc ttgcaatatg tgggatccac ttctaaatga atctcctgaa 180 tctgttcacg gatttcgttg tatgttagct attaaagatt tgcagtccgt tgaggaaact 240 tacgagccca atacattggg ccacgatata attagggatc ttatatctgt tgtaagggcc 300 cgtgactatg tcgaagcgac caggcgatat aatcatttcc acgcccgcct cgaaggttcg 360 ccgaacgctg aacttcgaca gcccatacag cagccgtgct gctgtccgca ttgtccaagg 420 cacaaacaag cgacgatcat ggacgtgcag gcccatgtac cggaagccca gaatatacag 480 aatgtatcga agccctgatg ttcctcgtgg atgtgaaggc ccatgtaaag tccagtttta 540 tgagcaacgg gatgatatta agcatactgg tattgttcgt tgtgttagtg atgatactcg 600 tggatctgga attactcaca gagtgggtaa gaggttctgt gttaaatgga tatatttttt 660 aggtaaagtc tggatggatg aaaatatcaa gaagcagaat cacactaatc aggtcatgtt 720 cttcttggtt cgtcatagaa ggccctatgg aaacagccca atggattttg gacaggtttt 780 taatatgatc gataatgagc ccagtaccgc aactgtgaag aatgatttgc gggataggtt 840 tcaagtgatg aggaaatttc atgctacagt tattggtggg ccctctggaa tgaaggtaca 900 ggcattagtt aagagatttt ttagaattaa cagtcatgta acttatcatc atcaggaggc 960 agccaagtac gagaaccata ctgaaaacgc cttgttattg tatatggcat gtccgcatgc 1020 ctctaatcca gtgtatgcaa ctatgaaaat acgcatctat ttctatgatt caatatcaaa 1080 ttaataaaat ttatatttta tatcatgagt tgcttttaca tttattgtgt tttcaagtac 1140 atcatacaat acataatcaa ctgctctgat tacattgtta attgaaatta caccgagact 1200 atctaaatac ttaagaactt gatatctaaa tactcttaag aaacgaccag tctgaggctg 1260 taatgtcgtc caaattcgga agttgagaaa acatttgtga atcccgaatg ccttcctgat 1320 gttgtggttg aatcttatct gaatggaaat gatgtcgttg ttcattagga atggcctctg 1380 gctgtgttct gttatcttga aatagagggg attgtttatc tcccagataa aaatgccatt 1440 ctctgcttga ggagcagtga tgagttcccc tgtgcgtgaa tccatgattg ttgcagttga 1500 tgtgtaggta gcaggagctg ccacagtcta ggtctacacg cttacgcctt attggtttct 1560 tcttggctat attgtgttgg accttgattg atacttgcga acagtggctc gtagagggtg 1620 acgaagattg cattcttgag agcccaattt ttcaaggata tgtttttttc ttcgtctaga 1680 tattccctat atgaggaggt aggtcctgga ttgcagacga agatagtggg aattccccct 1740 ttaatttgaa tgggcttcgc gtactttgtg ttgctttgcc agtccctctg ggcccccatg 1800 aattccttga agtgctttaa ataatgcggg tctacgtcat caatgacgtt gtaccacaca 1860 tccttactgt acacctttgg gcttaggtct agatgtccac ataaataatt atgtgggcct 1920 atagacctgg cccacattgt tttgcctgtt ctgctatcac cctcaatgac aatacttatg 1980 ggtctccatg gccgcgcagc ggaagatacg acgttctcgg cggcccactc gccaagttca 2040 tctggaactt gattaaaaga agaagaaaga aatggagaaa catcaacttc taaaggagga 2100 ctaaaaatcc tatctaaatt tgaagttaaa ttatgaaatt gtaaaatata gtcctttggg 2160 gccttctctt ttaatatatt gagggcctcg gatttactgc ctgaattgag tgcctcggca 2220 tatgcgacgt tggcagattg ctgacctcct ctagctgatc tgctatccat ttggaaaact 2280 ccaaaatcaa tgaagtctcc gtctttctcc acgtaggtct tgacatcggt tgagctctta 2340 gctgcctgaa tgttcggatg gaaatgtgct gacctgtttg gggataccag gtcgaagaac 2400 cgttggctct tacattggta tttgccttcg aattggataa gcacatggag atgtggttcc 2460 ccattctcgt ggagttctct gcaaactttg atgcattttt tatttgttgg ggtttctagg 2520 ttttttaatt gggaaagtgc ttcctcttta gagtgagaac aattgggata tgttaggaaa 2580 taatttttgg catatatttt aaataaacga ggcatgttga aatgaattgg tgtccctcaa 2640 agctctatgg caatcggtgt atcggtgtct tacttatacc tggacaccta atggctattt 2700 ggtaattttg taaaagtaca ttgcaattca aaattcaaaa ttcaaaaatc aaatcaataa 2760 agcggccatc cgtataatat t 2781 //