ID KC312665; SV 1; circular; genomic DNA; STD; VRL; 2781 BP. XX AC KC312665; XX DT 24-MAR-2013 (Rel. 116, Created) DT 24-MAR-2013 (Rel. 116, Last updated, Version 1) XX DE Tomato yellow leaf curl virus isolate SD-SG, complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RA Xue D., Li J., Xu X.; RT "Phylogenetic analysis and application of multiplex PCR in detection of RT Tomato yellow leaf curl virus in China"; RL Unpublished. XX RN [2] RP 1-2781 RA Xue D., Li J., Xu X.; RT ; RL Submitted (07-DEC-2012) to the INSDC. RL College of Horticulture, Northeast Agricultural University, No. 59, MuCai RL Road, Harbin, Hei Longjiang 150030, China XX DR MD5; 8e6355b578e751ea7324182de495cd75. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="Tomato yellow leaf curl virus" FT /host="Solanum lycopersicum" FT /isolate="SD-SG" FT /mol_type="genomic DNA" FT /country="China:ShanDong, ShouGuang" FT /collection_date="05-Aug-2012" FT /db_xref="taxon:10832" FT gene 148..498 FT /gene="AV2" FT CDS 148..498 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:M4QJR5" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:M4QJR5" FT /protein_id="AGH27809.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVVETYEPNTLGHDLIREL FT ISVVRARDYVEATRRYNHFHARLEGTPKAELRQPLQQPCCCPRSLSQKQATSMDVQAHV FT PEAQNLQNVSKP" FT gene 308..1084 FT /gene="AV1" FT CDS 308..1084 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:M4QL50" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:M4QL50" FT /protein_id="AGH27810.1" FT /translation="MSKRPGDIIISTPASKVRRRLNFDSPYSSRAAVLVHSVRNKRRAW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVHSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWIDENIKKQNHTNQVMFFFVRDRRPYGNSPMDFGQVFNMFVN FT EPSTATVKNELRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYIACTHASNPVYATTKIRIYFYDSISN" FT gene complement(1081..1485) FT /gene="AC3" FT CDS complement(1081..1485) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:M4QHG6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:M4QHG6" FT /protein_id="AGH27811.1" FT /translation="MDSRTGELITAPQAENGVFIRLTTYPLYFKITEHSQLPFLMNNDI FT ISIQIRFNHNIRKALGIHKCFLTFRIWTTLQPQTGRFLRVFRYQVLKYLYSLGVISINN FT VIRAVDHVLYAVLENTINVTATHDIKYKFY" FT gene complement(1226..1633) FT /gene="AC2" FT CDS complement(1226..1633) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:M4QHA1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:M4QHA1" FT /protein_id="AGH27812.1" FT /translation="MQSSSPSTSHCSQVSIKVQPKIAKKKPIRRKRVDLDCSCSYYLHI FT NCNNHGFTHRGTHHCSSSREWRFYTLDDLSPLFQDNRTQPAAISNEQRHHFDSDKIQPQ FT HQEGIGDSQMFSHLPNLDDITASDWSFLKSI" FT gene complement(1542..2615) FT /gene="AC1" FT CDS complement(1542..2615) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:M4QUE3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:M4QUE3" FT /protein_id="AGH27813.1" FT /translation="MPRLFKIYAKNYFLTYPNCSLSKEEALSQLKNLETPTNKKYIKVC FT RELHENGEPHLHVLIQFEGKYQCKKQRFFDLVSPNRSADFHPNIQAAKSSTDVKTYVEK FT DGDFIDFGVFQIDSRSARGGQQSANEAYAEALNSGSKSEALNILKEKAPKDYILQFHNL FT RSNLDRIFSPALEVYISPFLSSSFNQVPDELDEWVAENVESSAARPWRPISIVIEGDRR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNDVWYNVIDDVDPHYLKHFKEFMGAQRDWHS FT NTKYGKPIQIKGGIPTIFLSNPGPTSSYREYQDEEKNISLKNWALKNAIFVTLYEPLFA FT SINQGPTQDSQEETNKA" FT gene complement(2171..2464) FT /gene="AC4" FT CDS complement(2171..2464) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:M4QJR9" FT /protein_id="AGH27814.1" FT /translation="MGNHISMCLYNSKANTNVRNNGSSTWYPQTGQQISIRTFRQLRAQ FT QMSRPTWRKTETSLILEFSKSTADQLEEVSNLPTKHMPRHSIQAVNPRPSIY" XX SQ Sequence 2781 BP; 753 A; 538 C; 610 G; 880 T; 0 other; accggatggc cgcgccttct ctttttatgt ggtccccacg agggttccac atacgtcact 60 gtcaaccaat caaattgcat cctcaaacgt tagataagtg ttcatttgtc tttatatact 120 tggtccccaa gtagtctgtc ttgcaatatg tgggatccac ttctaaatga atttcctgaa 180 tctgttcacg gctttcgttg tatgttagct attaaatatt tgcagtccgt tgtggaaact 240 tacgagccca atacattggg ccacgattta attagggagc ttatatctgt tgtaagggcc 300 cgtgactatg tcgaagcgac caggcgatat aatcatttcc acgcccgcct cgaaggtacg 360 ccgaaggctg aacttcgaca gcccctacag cagccgtgct gctgtcctcg ttcactcagt 420 cagaaacaag cgacgagcat ggacgtacag gcccatgtac cggaagccca gaatctacag 480 aatgtatcga agccctgatg ttcctcgtgg atgtgaaggc ccatgtaaag tccattctta 540 tgagcaacgg gatgatatta agcatactgg tattgttcgt tgtgttagtg atgttacacg 600 tggatctgga attactcaca gagtgggtaa gaggttctgt gttaaatcga tatatttttt 660 aggtaaagtc tggattgatg aaaatatcaa gaagcagaat cacactaatc aggtcatgtt 720 cttcttcgtt cgtgatagaa ggccctatgg aaacagccca atggattttg gacaggtttt 780 taatatgttc gttaatgagc ccagtaccgc aactgtgaag aatgagttgc gggataggtt 840 tcaagtgatg aggaaatttc atgctacagt tattggcggg ccctctggaa tgaaggaaca 900 ggcattagtt aagagatttt ttagaattaa cagtcatgta acttataatc accaggaggc 960 agccaagtat gagaaccata ctgaaaacgc cttgttattg tatatcgcat gtacgcatgc 1020 ctctaatcca gtgtatgcaa ctacgaaaat acgcatctat ttctatgatt caatatcaaa 1080 ttaataaaat ttatatttta tatcatgagt tgctgttaca tttattgtgt tttcaagtac 1140 agcatacaat acatgatcaa ctgctctgat tacattgtta attgaaatta cgccaagact 1200 atataaatac ttaagaactt gatatctaaa tactcttaag aaacgaccag tctgaggctg 1260 taatgtcgtc caaattcgga aggtgagaaa acatttgtga atccccaatg ccttcctgat 1320 gttgtggttg aatcttatct gaatcgaaat gatgtcgttg ttcattagaa atggcagctg 1380 gctgtgttct gttatcttga aatagagggg ataggtcgtc aagcgtataa aaacgccatt 1440 ctctgcttga ggagcagtga tgagttcccc tgtgcgtgaa tccatgattg ttgcagttga 1500 tgtggaggta gtatgagcag ctacagtcta ggtctacacg cttacgcctt attggtttct 1560 tcttggctat cttgggttgg accttgattg atacttgcga acagtggctc gtagagggtg 1620 acgaagattg cattcttgag agcccaattt ttcaaggata tgtttttttc ttcgtcttga 1680 tattccctat atgaggaggt aggtcctgga ttggagagga agatagtggg aattccccct 1740 ttaatttgaa tgggcttccc gtactttgtg ttgctgtgcc agtccctctg ggcccccatg 1800 aattccttga agtgctttaa ataatgcggg tctacgtcat caatgacgtt gtaccacaca 1860 tcattactgt acacctttgg gcttaggtct aaatgtccac ataaataatt atgtgggcct 1920 agagacctgg cccacattgt tttgcctgtt ctcctatcac cctcaatgac aatacttatg 1980 ggtctccatg gccgcgcagc ggaagattcg acgttctcgg cgacccactc gtcaagttca 2040 tctggaactt gattaaaaga agaagaaaga aatggagaaa tataaacttc taaagcagga 2100 ctaaaaatcc tatctaaatt tgaacgtaaa ttatgaaatt gtaaaatata gtcctttggg 2160 gccttctctt ttaatatatt gagggcctcg gatttactgc ctgaattgag tgcctcggca 2220 tatgcttcgt tggcagattg ctgacctcct ctagctgatc tgctgtcgat ttggaaaact 2280 ccaaaatcaa tgaagtctcc gtctttctcc acgtaggtct tgacatctgt tgagctctta 2340 gctgcctgaa tgttcggatg gaaatctgct gacctgtttg gggataccag gtcgaagaac 2400 cgttgtttct tacattggta tttgccttcg aattgtataa gcacatggag atgtggttcc 2460 ccattctcgt ggagttctct gcaaactttg atgtattttt tatttgttgg tgtttctagg 2520 ttttttaatt gagaaagtgc ttcctcttta gatagagaac aattgggata tgttaggaaa 2580 taatttttgg catatatttt aaataaacga ggcatgttga aatgaattgg tgtccctcaa 2640 agctctatgg caatcggtgt atcggtgtct tacttatacc tggacaccta atggctattt 2700 ggtaattttg taaaagtaca ttgcaattca acattcaaaa ttcaaaaatc aaatcattaa 2760 agcggccatc cgtataatat t 2781 //