ID KC312661; SV 1; circular; genomic DNA; STD; VRL; 2781 BP. XX AC KC312661; XX DT 24-MAR-2013 (Rel. 116, Created) DT 24-MAR-2013 (Rel. 116, Last updated, Version 1) XX DE Tomato yellow leaf curl virus isolate HN-ZZ, complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RA Xue D., Li J., Xu X.; RT "Phylogenetic analysis and application of multiplex PCR in detection of RT Tomato yellow leaf curl virus in China"; RL Unpublished. XX RN [2] RP 1-2781 RA Xue D., Li J., Xu X.; RT ; RL Submitted (07-DEC-2012) to the INSDC. RL College of Horticulture, Northeast Agricultural University, No. 59, MuCai RL Road, Harbin, Hei Longjiang 150030, China XX DR MD5; 441ed6e1d99801ad30b999c60bbe8551. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="Tomato yellow leaf curl virus" FT /host="Solanum lycopersicum" FT /isolate="HN-ZZ" FT /mol_type="genomic DNA" FT /country="China:HeNan, ZhengZhou" FT /collection_date="20-Aug-2012" FT /db_xref="taxon:10832" FT gene 148..498 FT /gene="AV2" FT CDS 148..498 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:M4QL13" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:M4QL13" FT /protein_id="AGH27785.1" FT /translation="MWDPLLNEFPESVHGFRCMLASKYLQSVEETYAPNTLGHDLIRDL FT ISVVRARDYVEATRRYNQFHARLEGSPKAELRQPIQLRGSSPHCPRHKQATIMDEQAHV FT PEAQNIQNVSKP" FT gene 308..1084 FT /gene="AV1" FT CDS 308..1084 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:M4QHB5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:M4QHB5" FT /protein_id="AGH27786.1" FT /translation="MSKRPGDIINSTPASKVRRRLNFDSPYSCEDHLPIVQGTNKRRSW FT TNRRMYRKPRIYRMYRSPDVPRGCEGPCKVQSDEQRDDIKHTGIVRCISDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNHVMFFLVRDRRPYGNSPMDFGQVFNMFDN FT EPSTATAKNDLRDRFQVMRKFHATVIGEPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACMHASNPVYATMKIRNYFYDSISN" FT gene complement(1081..1485) FT /gene="AC3" FT CDS complement(1081..1485) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:M4QH48" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:M4QH48" FT /protein_id="AGH27787.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITELSQRPFLMNNDI FT ISIQIRFNHNIRTALGIHKCFLNFRIWTTLRPQTGRFLRVFRYQVLKYLYSLGVISINN FT VIRAVDNVLYDVLENTINGTATNDIKYKFY" FT gene complement(1226..1633) FT /gene="AC2" FT CDS complement(1226..1633) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:M4QUA5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:M4QUA5" FT /protein_id="AGH27788.1" FT /translation="MQSSSPSTSHCSQVSINVQHKIAKKKPIRRKRVDLDCGCSYYLHI FT NCNNHGFTHRGTHHCSSSREWCFYLGDKQSPLFQDNRTQPEAISNEQRYHFHSDKIQPQ FT HQDSIGDSQMFSQLPNLDDITASDWSFLKSI" FT gene complement(1542..2615) FT /gene="AC1" FT CDS complement(1542..2615) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:M4QJM2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:M4QJM2" FT /protein_id="AGH27789.1" FT /translation="MPRLFKIYAKNYFLTYPNCSLSKEEALSQLKNLESPTNKKYIKVC FT RELHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSADFHPNIQAAKSSTDVKTYVEK FT DGDFIDFGVFQIDTRSARGGQQSANDSYAEALNSGSKSEALNILKEKAPKDYILQFHNL FT SSNLDRIFNPPLEVYISPFLSSSFNQVPDELDEWVAEIVVSSAARPWRPISIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPNVYSNDVWYNVIDDVDPHYLNLVGSLMGAQRDWQS FT NTKYGKPIQIKGGIPTIFHCNPGPTSSYREYLDEEKNISLKNWALKNAIFVTLYEPLFA FT SINQCPTQDSQEETNKA" FT gene complement(2171..2464) FT /gene="AC4" FT CDS complement(2171..2464) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:M4QL17" FT /protein_id="AGH27790.1" FT /translation="MGNHISMCLSNSKANTNVRTSGSSTWYPQTGQQISIRTFRQLRAQ FT QMSRPTWRKTETSLILEFSKSIPDQLEEVSNLPTTHMPRHSIQAVNPRPSIY" XX SQ Sequence 2781 BP; 769 A; 532 C; 609 G; 871 T; 0 other; accggatggc cgcgccttct ctttttatgt ggtccccacg agggttccac atacgtcact 60 gtcaaccaat caaatagcat cctcaaacgt tagataagtg ttcatttgtc tttatatact 120 tggtccccaa gtagtctgtc ttgcaatatg tgggatccac ttctaaatga atttcctgaa 180 tctgttcacg gatttcgttg tatgttagct agtaaatatt tgcagtccgt tgaggaaact 240 tacgcgccca atacattggg ccacgattta attagggatc ttatatctgt tgtaagggcc 300 cgtgactatg tcgaagcgac caggcgatat aatcaattcc acgcccgcct cgaaggttcg 360 ccgaaggctg aacttcgaca gcccatacag ctgcgaggat catctcccca ttgtccaagg 420 cacaaacaag cgacgatcat ggacgaacag gcgcatgtac cggaagccca gaatatacag 480 aatgtatcga agccctgatg ttcctcgtgg atgtgaaggc ccatgtaaag tccagtctga 540 tgagcaacgg gatgatatta agcatactgg tattgttcgt tgtattagtg atgttactcg 600 tggatctgga attactcaca gagtgggtaa gaggttctgt gttaaatcga tatatttttt 660 aggtaaagtc tggatggatg aaaatatcaa gaagcagaat cacactaatc acgtcatgtt 720 cttcttggtt cgtgatagaa ggccctatgg aaacagccca atggattttg gacaggtttt 780 taatatgttc gataatgagc ccagtaccgc aaccgcgaag aatgatttgc gggataggtt 840 tcaagtgatg aggaaatttc atgctacagt tattggtgag ccctctggaa tgaaggaaca 900 ggcattagtt aagagatttt ttagaattaa cagtcatgta acttataatc atcaagaggc 960 agccaagtat gagaaccata ctgaaaacgc cttgttattg tatatggcat gtatgcatgc 1020 ctctaatcca gtgtatgcaa ctatgaaaat acgcaactat ttctatgatt caatatcaaa 1080 ttaataaaat ttatatttta tatcattagt tgctgttcca tttattgtgt tttcaagtac 1140 atcatacaat acattatcaa ctgctctgat tacattgtta attgaaatta caccaagact 1200 atataaatac ttaagaactt gatatctaaa tactcttaag aaacgaccag tctgaggccg 1260 taatgtcgtc caaattcgga agttgagaaa acatttgtga atccccaatg ctgtcctgat 1320 gttgtggttg aatcttatct gaatggaaat gatatcgttg ttcattagaa atggcctctg 1380 gctgagttct gttatcttga aatagagggg attgtttatc tcccagataa aaacaccatt 1440 ctctgcttga ggagcagtga tgagttcccc tgtgcgtgaa tccatgattg ttgcagttga 1500 tgtggaggta gtatgagcag ccacagtcta gatctacacg cttacgcctt attggtttct 1560 tcttggctat cttgtgttgg acattgattg atacttgcga acagtggctc gtagagggtg 1620 acgaagattg cattcttgag agcccaattt ttcaaggata tgtttttttc ttcgtctaga 1680 tattccctat atgaggaggt aggtcctgga ttgcagtgga agatagtggg aattccccct 1740 ttaatttgaa tgggcttccc gtactttgtg ttgctttgcc agtccctctg ggcccccatg 1800 agactgccga cgaggtttaa ataatgcggg tctacgtcat caatgacgtt gtaccacaca 1860 tcattactgt acacgtttgg gcttaggtct agatgtccac ataaataatt atgtgggcct 1920 agagacctgg cccacatggt tttgcctgtt ctgctatcac cctcaatgac aatacttatg 1980 ggtctccatg gccgcgcagc ggaagatacg acgatctcgg cgacccactc gtcaagttca 2040 tctggaactt gattaaaaga agaagaaaga aatggagata tataaacttc taaaggagga 2100 ttaaaaatcc tatctaaatt tgagcttaaa ttatgaaatt gtaaaatata gtcctttggg 2160 gccttctctt ttaatatatt gagggcctcg gatttactgc ctgaattgag tgcctcggca 2220 tatgagtcgt tggcagattg ctgacctcct ctagctgatc tggtatcgat ttggaaaact 2280 ccaaaatcaa tgaagtctcc gtctttctcc acgtaggtct tgacatctgt tgagctctta 2340 gctgcctgaa tgttcggatg gaaatctgct gacctgtttg gggataccag gtcgaagaac 2400 cgctggttct tacattggta tttgccttcg aattggataa gcacatggag atgtggttcc 2460 ccattctcgt ggagttctct gcaaactttg atgtattttt tatttgttgg gctttctagg 2520 ttttttaatt gggaaagtgc ttcctctttg gagagagaac aattaggata tgttaggaaa 2580 taatttttgg catatatttt aaataaacga ggcatgttga aatgaattgg tgtccctcaa 2640 agctctatgg caatcggtgt atcggtgtct tacttatacc tggacaccta atggctattt 2700 ggtaattttg taaaagtaca ttgcaattca acattcaaaa ttcaaaaatc aaatcaataa 2760 agcggccatc cgtataatat t 2781 //