ID KC312660; SV 1; circular; genomic DNA; STD; VRL; 2781 BP. XX AC KC312660; XX DT 24-MAR-2013 (Rel. 116, Created) DT 24-MAR-2013 (Rel. 116, Last updated, Version 1) XX DE Tomato yellow leaf curl virus isolate HB-WH2, complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RA Xue D., Li J., Xu X.; RT "Phylogenetic analysis and application of multiplex PCR in detection of RT Tomato yellow leaf curl virus in China"; RL Unpublished. XX RN [2] RP 1-2781 RA Xue D., Li J., Xu X.; RT ; RL Submitted (07-DEC-2012) to the INSDC. RL College of Horticulture, Northeast Agricultural University, No. 59, MuCai RL Road, Harbin, Hei Longjiang 150030, China XX DR MD5; f18bc51c1dc9749b19800ebe1ad3d662. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="Tomato yellow leaf curl virus" FT /host="Solanum lycopersicum" FT /isolate="HB-WH2" FT /mol_type="genomic DNA" FT /country="China:HuBei, WuHan" FT /collection_date="22-Sep-2012" FT /db_xref="taxon:10832" FT gene 148..498 FT /gene="AV2" FT CDS 148..498 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:M4QJL3" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:M4QJL3" FT /protein_id="AGH27779.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLHSVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQQCCCPHCPRHKQATIVDVQAHV FT PEAQNIQNVSKP" FT gene 308..1084 FT /gene="AV1" FT CDS 308..1084 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:M4QL09" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:M4QL09" FT /protein_id="AGH27780.1" FT /translation="MSKRPGDIIISTPASKDRRRLNFDSPYSSSAAAPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYAQRDDIKHTGIVPSLLDVTRGSGITH FT RVGKRFCVKSIYFLGKGWMDENIKKQNHTNQVMFFSVRDRRPYGNSPMDFGQVFNMFDN FT EPSTATVKNALRDRFQVMRKFHATVIGEPSGMKEEAVVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT gene complement(1081..1485) FT /gene="AC3" FT CDS complement(1081..1485) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:M4QHB0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:M4QHB0" FT /protein_id="AGH27781.1" FT /translation="MDSRTGELITAPQAYNVVFIWEINNPLYFKITEHSQRPFLMNSDI FT ISIQIRFNHNIRKALGIHKCFLIFRIWTTLQPQTGRFLRVFRYQVLKYLYSLVVISINN FT VISAVDHILYDVLENTINVTATHDIKYKFY" FT gene complement(1226..1633) FT /gene="AC2" FT CDS complement(1226..1633) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:M4QH41" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:M4QH41" FT /protein_id="AGH27782.1" FT /translation="MQSSSPSTSHCSQVSIKVQDKIAKKKPIRRKRVDLDGGCSYYLHI FT NCNNHGFTHRGTHHCSSSIQRRFYMGDKQSPLFQDNRTQPAAISNEQRHHFHSDKIQPQ FT HQEGIGDSQMFSHLPNLDDITASDWSFLKSI" FT gene complement(1542..2615) FT /gene="AC1" FT CDS complement(1542..2615) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:M4QUA0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:M4QUA0" FT /protein_id="AGH27783.1" FT /translation="MPRLFKIYAKNYFLTYPTCSLSKEEALSQLKNRETPTNKKYIKVC FT RELHENGGPHLHVLIQFEGKYQCKNHRFFDLVSPNRSAHFHPNIQAAKSSTDVKTYVEK FT DGDFIDFGVFQIDRRSARGGQQSANDAYAAALNSGSKSEALNILKEKAPKDYILQFHNL FT SSNLDRIFSPPLEVYISPFLSSSFNQVPDELDEWVAKNVVSSAARPWRPISIVIEGDSR FT TGKTMWARSLGPHNYFCGHPDLSPKVYSNDVWYNVIDDVDPHYLKHFKAFMGAQRDWQS FT NTKYGKPIQIKGGIPTIFLCNPGPTSSYREYQDEEKNISLKNWALKNAIFVTLYEPLFA FT SINQGPRQDSQEETNKA" FT gene complement(2171..2464) FT /gene="AC4" FT CDS complement(2171..2464) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:M4QJL7" FT /protein_id="AGH27784.1" FT /translation="MGDHISMCLSNSKANTNVRTIGSSTWYPQIGQHISIRTFRQLRAQ FT QMSRPTWRKTETSLILEFSKSIGDQLEEVSNLPTTHMPRHSIQAVNPRPSIY" XX SQ Sequence 2781 BP; 759 A; 544 C; 613 G; 865 T; 0 other; accggatggc cgcgccttct ctttttatgt ggtccccacg agggttccac atacgtcact 60 gtcaaccaat caaattgcat cctcaaacgt tagataagtg ttcatttgtc tttatatact 120 tggtccccaa gtagtctgtc ttgcaatatg tgggatccac ttctaaatga atttcctgaa 180 tctgtccacg gatttcgttg tatgttagct attaaatatt tgcactccgt tgaggaaact 240 tacgagccca atacattggg ccacgattta attagagatc ttatatctgt tgtaagggcc 300 cgtgactatg tcgaagcgac caggcgatat aatcatttcc acgcccgcct cgaaggatcg 360 ccgaaggctg aacttcgaca gcccatacag cagcagtgct gctgccccca ttgtccaagg 420 cacaaacaag cgacgatcgt ggacgtacag gcccatgtac cggaagccca gaatatacag 480 aatgtatcga agccctgatg ttcctcgtgg atgtgaaggc ccatgtaaag tccagtctta 540 tgcgcaacgg gatgatatta agcatactgg tattgttcct tcacttctcg atgtgactcg 600 tggatctgga attactcaca gagtgggtaa gaggttctgt gttaaatcga tatatttttt 660 aggtaaaggc tggatggatg aaaatatcaa gaagcagaat cacactaatc aggtcatgtt 720 cttctcggtt cgtgatagaa ggccctatgg aaacagccca atggattttg gacaggtttt 780 taatatgttc gataatgagc ccagtaccgc aactgtgaag aatgctttgc gggataggtt 840 tcaagtgatg aggaaatttc atgctacagt tattggtgag ccctctggaa tgaaggaaga 900 ggcagtagtt aagagatttt ttagaattaa cagtcatgta acttataatc atcaggaggc 960 agccaagtat gagaatcata ctgaaaacgc cttgttattg tatatggcat gcacgcatgc 1020 ctctaatcca gtgtatgcaa ctatgaaaat acgcatctat ttctatgatt caatatcaaa 1080 ttaataaaat ttatatttta tatcatgagt tgctgtcaca tttattgtgt tttcaagtac 1140 atcatacaat atatgatcaa ctgcgctgat tacattgtta attgaaatta caacaagact 1200 atataaatac ttaagaactt gatatctaaa tactcttaag aaacgaccag tctgaggctg 1260 taatgtcgtc caaattcgga agatgagaaa acatttgtga atccccaatg ccttcctgat 1320 gttgtggttg aatcttatct gaatggaaat gatgtcgctg ttcattagaa atggccgctg 1380 gctgtgttct gttatcttga aatagagggg attgtttatc tcccatataa aaacgacgtt 1440 gtatgcttga ggagcagtga tgagttcccc tgtgcgtgaa tccatgattg ttgcagttga 1500 tgtggaggta gtatgagcag ccaccgtcta ggtctacacg cttacgcctt attggtttct 1560 tcttggctat cttgtcttgg accttgattg atacttgcga acagtggctc gtagagggtg 1620 acgaagattg cattcttgag agcccaattt ttcaaggata tgtttttttc ttcgtcttga 1680 tattccctat atgaggaggt aggtcctgga ttgcacagga agatagtggg aattccccct 1740 ttaatttgaa tgggcttccc gtactttgtg ttgctttgcc agtccctctg ggcccccatg 1800 aatgccttga agtgctttaa ataatgcggg tctacgtcat caatgacgtt gtaccacaca 1860 tcattactgt acacctttgg gcttaggtcc ggatgtccac agaaataatt atgtgggcct 1920 agagacctgg cccacattgt tttgcctgtt ctgctgtcac cctcaatgac aatacttatg 1980 ggtctccatg gccgcgcagc ggaagatacg acgttcttgg cgacccactc gtcaagttca 2040 tctggaactt gattaaaaga agaagaaaga aacggagaaa tataaacttc taaaggagga 2100 ctaaaaatcc tatctaaatt tgaacttaaa ttatgaaatt gtaaaatata gtcctttggg 2160 gccttctctt ttaatatatt gagggcctcg gatttactgc ctgaattgag tgccgcggca 2220 tatgcgtcgt tggcagattg ctgacctcct ctagctgatc tcctatcgat ttggaaaact 2280 ccaaaatcaa tgaagtctcc gtctttctcc acgtaggtct tgacatctgt tgagctctta 2340 gctgcctgaa tgttcggatg gaaatgtgct gacctatttg gggataccag gtcgaagaac 2400 cgatggttct tacattggta tttgccttcg aattggataa gcacatggag atgtggtccc 2460 ccattctcgt ggagttctct gcaaactttg atgtattttt tatttgttgg ggtttctcgg 2520 ttttttaatt gggaaagtgc ttcctcttta gagagagaac aagtgggata tgttaggaaa 2580 taatttttgg catatatttt aaataaacga ggcatgttga aatgaattgg tgtccctcaa 2640 agctctatgg caatcggtgt atcggtgtct tacttatacc tggacaccta atggctattt 2700 ggtaattttg taaaagtaca ttgcaattca acattcaaaa ttcaaaaatc aaatcaataa 2760 agcggccatc cgtataatat t 2781 //