ID KC312659; SV 1; circular; genomic DNA; STD; VRL; 2781 BP. XX AC KC312659; XX DT 24-MAR-2013 (Rel. 116, Created) DT 24-MAR-2013 (Rel. 116, Last updated, Version 1) XX DE Tomato yellow leaf curl virus isolate HB-WH1, complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RA Xue D., Li J., Xu X.; RT "Phylogenetic analysis and application of multiplex PCR in detection of RT Tomato yellow leaf curl virus in China"; RL Unpublished. XX RN [2] RP 1-2781 RA Xue D., Li J., Xu X.; RT ; RL Submitted (07-DEC-2012) to the INSDC. RL College of Horticulture, Northeast Agricultural University, No. 59, MuCai RL Road, Harbin, Hei Longjiang 150030, China XX DR MD5; dcc1ad4516bcdff4cc9a728e97f1bddc. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="Tomato yellow leaf curl virus" FT /host="Solanum lycopersicum" FT /isolate="HB-WH1" FT /mol_type="genomic DNA" FT /country="China:HuBei, WuHan" FT /collection_date="22-Sep-2012" FT /db_xref="taxon:10832" FT gene 148..498 FT /gene="AV2" FT CDS 148..498 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:M4QU92" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:M4QU92" FT /protein_id="AGH27773.1" FT /translation="MWDPLLNEFTESVHGFRCMLAIKYLQAVAETYEPNTLGHDLIRDL FT ISLVRARDYVEATRRYNHFHARLEGSPKAELRQHVSQPCCCPHCPRHKRATIMDVQAHV FT PEAQNIQNVSKP" FT gene 308..1084 FT /gene="AV1" FT CDS 308..1084 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:M4QJK8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:M4QJK8" FT /protein_id="AGH27774.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSTSRSRAAVPIVQGTNERRSW FT TYRPMYRKLRIYRMYRSPDVPRGCEGPCKVQYYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLVKVWMDENIKKQNHTNQAMFFLVRDRRPYGNSPMDFGQVFNMFDN FT VPSTATVKNDLRDRFQVMRKFHATVIGGPSVMKEQALVKRFFRINSHVTYNHQEAAKHE FT NHTENALLLYMACTHAYNPVYATMKIRIYFYDSISN" FT gene complement(1081..1485) FT /gene="AC3" FT CDS complement(1081..1485) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:M4QL05" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:M4QL05" FT /protein_id="AGH27775.1" FT /translation="MDSRIGELITAPQAENGVFIWEIHNPLYFKITENSQRPFLINHDI FT ISIQIRFNHNIRKVLGIHECFLNFRIWTTLQLQTGRFLRVFRYQVLKYLDSLGVISINN FT VIRVVDHVLYDVLENTINATETHDIKYKFY" FT gene complement(1226..1633) FT /gene="AC2" FT CDS complement(1226..1633) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:M4QHA3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:M4QHA3" FT /protein_id="AGH27776.1" FT /translation="MQPSSPSTSHCSQVSIKVQHKITKKKPIRRKRADLDCGCSYYLHI FT NCNNHGFTHRGTHHCSSSREWRFYLGDTQSPLFQDNRKQPEAISNQPRHHFHSDKIQPQ FT HQEGIGDSRMFSQLPNLDDITASDWSFLKSI" FT gene complement(1542..2615) FT /gene="AC1" FT CDS complement(1542..2615) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:M4QH35" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:M4QH35" FT /protein_id="AGH27777.1" FT /translation="MPRLFKIYAKNYFLTYRNCSLSEEEALSQLKNLDTPTNKKYIKVC FT RELHENGEPHLHVLIQFEGKYDSKNQRFFDLVSPNRSAHFHPNIQAAKRSTDVKTYVEK FT DGDFIDFGVFQINGRSARGGQQSSNDAYAEALNSGSKSEALNILKEKAPKDYILQFHNL FT SSNLYRIFSPPLEVYVSPFLSSSFNQVPDELEEWVAENVVSSAVRPWRPISIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDVSPKVYSNDAWYNVIDDVDPHYLNHFKEFMGAQRDWQS FT NTYDGKPIQIKGGIPTILLCNPGPTSSYREYLHEEKNISLKNWALKNATFVTLYEPLFT FT SINQGPTQDNQEETNKA" FT gene complement(2171..2464) FT /gene="AC4" FT CDS complement(2171..2464) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:M4QU96" FT /protein_id="AGH27778.1" FT /translation="MGNHISMCLSNSKANTTQRTNGSSTWYPQTGQHISIRTFRQLRGQ FT QMSRPTWKKTETSLILEFSKSMADQLEEVSNLPTTHMPRHSIQAVNPRPSIY" XX SQ Sequence 2781 BP; 760 A; 531 C; 609 G; 881 T; 0 other; accggatggc cgcgcctttt ctttttatgt ggtccccatg agggttccac agacgacact 60 gtcaaccaat caaattgcat cctcaaacgt tagataagtg tttatttgtc tttatatact 120 tggtccccaa gtagtttgtc ctgcaatatg tgggatccac ttctaaatga atttactgaa 180 tctgttcacg gatttcgttg tatgttagct attaaatatt tgcaggccgt tgcggaaact 240 tacgagccca atacattggg ccacgattta attagggatc ttatatctct tgtaagggcc 300 cgtgactatg tcgaagcgac caggcgatat aatcatttcc acgcccgtct cgaaggttcg 360 ccgaaggctg aacttcgaca gcacgtctcg cagccgtgct gctgtcccca ttgtccaagg 420 cacaaacgag cgacgatcat ggacgtacag gcccatgtac cggaagctca gaatatacag 480 aatgtatcga agccctgatg ttcctcgtgg atgtgaaggc ccatgtaaag tccagtatta 540 tgagcaacgg gatgatatta agcatactgg tatcgttcgt tgtgttagtg atgttactcg 600 tggatctgga attacccaca gagtgggtaa gaggttctgt gttaaatcga tatatttttt 660 agttaaagtc tggatggatg aaaatattaa gaagcagaat cacactaatc aggccatgtt 720 cttcttggtt cgtgatagaa ggccctatgg aaacagccca atggattttg gacaggtttt 780 taatatgttc gataatgtgc ccagtaccgc aaccgtgaag aatgatttgc gggataggtt 840 tcaagtgatg aggaaatttc atgctacagt tattggtggg ccctctgtaa tgaaggaaca 900 ggcattagtt aagagatttt ttagaattaa cagtcacgta acttataatc atcaggaggc 960 agccaagcat gagaaccata ctgaaaacgc cttgttattg tatatggcat gtacgcatgc 1020 ctataatcca gtgtatgcaa ctatgaaaat acgcatctat ttctatgatt caatatcaaa 1080 ttaataaaat ttatatttta tatcatgagt ttctgttgca tttattgtgt tttcaagtac 1140 atcatacaat acatgatcaa ccactctgat tacattatta attgaaatta caccaagact 1200 atctaaatac ttaagaactt gatatctaaa tactcttaag aaacgaccag tctgaagctg 1260 taatgtcgtc caaattcgga agttgagaaa acattcgtga atccccaata ccttcctgat 1320 gttgtggttg aatcttatct gaatggaaat gatgtcgtgg ttgattagaa atggcctctg 1380 gctgttttct gttatcttga aatagagggg attgtgtatc tcccagataa aaacgccatt 1440 ctctgcttga ggagcagtga tgagttcccc tatgcgtgaa tccatgattg ttgcagttga 1500 tgtggaggta gtatgagcag ccacagtcta ggtctgcacg cttacgcctt attggtttct 1560 tcttggttat cttgtgttgg accttgattg atacttgtga acagtggctc gtagagggtg 1620 acgaaggttg cattcttgag agcccaattt ttcaaggata tgtttttttc ttcgtgtaga 1680 tattccctat atgaggaggt aggtcctgga ttgcagagca agatagtggg aattccccct 1740 ttaatttgaa tgggcttccc gtcgtacgtg ttgctttgcc agtccctctg ggcccccatg 1800 aattccttga agtggtttaa ataatgcggg tctacgtcat caatgacgtt gtaccacgca 1860 tcattactgt acacctttgg gcttacgtct agatgtccac ataaataatt atgtgggcct 1920 agagaccttg cccacattgt tttgcctgtt ctgctatcac cctcaatgac aatacttatg 1980 ggtctccatg gccgcacagc ggaagatacg acgttctcgg cgacccactc ttcaagttca 2040 tctggaactt gattaaaaga agaagaaaga aatggagaaa cataaacttc taaaggagga 2100 ctaaaaatcc tatataaatt tgaacttaaa ttatgaaatt gtaaaatata gtcctttggg 2160 gccttctctt ttaatatatt gagggcctcg gatttactgc ctgaattgag tgcctcggca 2220 tatgcgtcgt tggaagattg ctgacctcct ctagctgatc tgccattgat ttggaaaact 2280 ccaaaatcaa tgaagtctcc gtctttttcc acgtaggtct tgacatctgt tgacctctta 2340 gctgcctgaa tgttcggatg gaaatgtgct gacctgtttg gggataccag gtcgaagaac 2400 cgttggttct ttgagtcgta tttgccttcg aattggataa gcacatggag atgtggttcc 2460 ccattctcgt ggagttctct gcaaactttg atgtattttt tatttgttgg ggtgtctagg 2520 ttttttaatt gggaaagggc ttcctcttca gagagagaac aattgcgata tgttaggaaa 2580 taatttttgg catatatttt aaataaacga ggcatgttga aatgaattgg tgtccctcaa 2640 agctctatgg caatcggtgt atcggtgtct tacttatacc tggacaccta atggctattt 2700 ggtaattttg taaaagtaca attcaattca aaattcaaaa ttcaaaaatc aaatcattaa 2760 agcggccatc cgtataatat t 2781 //