ID KC312658; SV 1; circular; genomic DNA; STD; VRL; 2782 BP. XX AC KC312658; XX DT 24-MAR-2013 (Rel. 116, Created) DT 24-MAR-2013 (Rel. 116, Last updated, Version 1) XX DE Tomato yellow leaf curl virus isolate HB-TS, complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2782 RA Xue D., Li J., Xu X.; RT "Phylogenetic analysis and application of multiplex PCR in detection of RT Tomato yellow leaf curl virus in China"; RL Unpublished. XX RN [2] RP 1-2782 RA Xue D., Li J., Xu X.; RT ; RL Submitted (07-DEC-2012) to the INSDC. RL College of Horticulture, Northeast Agricultural University, No. 59, MuCai RL Road, Harbin, Hei Longjiang 150030, China XX DR MD5; 8d982fd1285b9bcd93bd5a65e68e296f. XX FH Key Location/Qualifiers FH FT source 1..2782 FT /organism="Tomato yellow leaf curl virus" FT /host="Solanum lycopersicum" FT /isolate="HB-TS" FT /mol_type="genomic DNA" FT /country="China:HeBei, TangShan" FT /collection_date="02-Aug-2012" FT /db_xref="taxon:10832" FT gene 149..499 FT /gene="AV2" FT CDS 149..499 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:M4QH21" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:M4QH21" FT /protein_id="AGH27767.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVVETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRLKQATIMDVQAHV FT PEAQNIQNVSKP" FT gene 309..1085 FT /gene="AV1" FT CDS 309..1085 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:M4QU85" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:M4QU85" FT /protein_id="AGH27768.1" FT /translation="MSKRPGDIIISTPASKVRRRLNFDSPYSSRAAVPIVQGSNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRVDIKHTGIDRCVSDGTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENITKQNHTNQVMFFLVRDRRPSGNSPMDFGQVFNMFDN FT EPSTATVKNDLRDGFQVMRKFHATVIGGPSGTKEQALVKRFFRINSHVTYNHQEAAKYV FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT gene complement(1082..1486) FT /gene="AC3" FT CDS complement(1082..1486) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:M4QJK4" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:M4QJK4" FT /protein_id="AGH27769.1" FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITDHSQRPFLMNNDI FT ISIQIRFNHNIRKALGIHKCFLNFRIWTTLQPQTGRFLRVFRYQVLKYLYSLGVISINN FT VIRAVDHVLYDVIENTINVTATHDIKYKFY" FT gene complement(1227..1634) FT /gene="AC2" FT CDS complement(1227..1634) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:M4QKZ9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:M4QKZ9" FT /protein_id="AGH27770.1" FT /translation="MQSSSPSTSHCSQVSIKVQHKIAKKKPIRRKRVHLDCGCSYYLHI FT NCNNHGFTHRGTHHCSSSREWRFYLGDKQSPLFQDNRSQPEAISNEQRHHFHSDKIQPQ FT HQEGIGDSQMFSQLPNLDDITASDWSFLKSI" FT gene complement(1543..2616) FT /gene="AC1" FT CDS complement(1543..2616) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:M4QH96" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:M4QH96" FT /protein_id="AGH27771.1" FT /translation="MPRLFKIYAKNYCLTYPNCSLSKEAALSQLKNLETPSNIKYIKVC FT RELHENGEPHLHVLIQFEGKYQCKNQRFFDLVSPNRSADFHPNIQAAKSSTDVKTYVEK FT DGDFIDFGVFQINSRSARGGQQSANDAYAEALNSGSKSEALNILKEKAPKDYILQFHNL FT SSNLDMIFNPPLEVYISPFLSSSFNQVPDELDEWVAENAVSSAARPWRPISIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSSKVYSNDVWYNVIDDVDPHYLKHFKEFMGAQRDWQS FT NTKYGKPIQIKGGIPTNFLCNPGPTSSYREYLDEEKNISLKNWALKNAIFVTLYEPLFA FT SINQGPTQDSQEETNKA" FT gene complement(2172..2465) FT /gene="AC4" FT CDS complement(2172..2465) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:M4QH28" FT /protein_id="AGH27772.1" FT /translation="MGNHISMCLSNSKANTNVRTNASSTWYPQTGQQISIRTFRQLRAQ FT QMSRPTWRKTETSLILEFSKSIADQLEEVSNLPTTHMPRHSIQAVNPRLSIY" XX SQ Sequence 2782 BP; 757 A; 535 C; 611 G; 879 T; 0 other; accggatggc cgcgcctttc tctttttatg tggtccccac gagggttcca catacgtcac 60 tgtcaaccaa tcaaatagca tcctcaaacg ttagataagt gttcatttgt ctttatatac 120 ttggtcccca agtagtctgt cttgcaatat gtgggatcca cttctaaatg aatttcccga 180 atctgttcac ggatttcgtt gtatgctagc tattaaatat ttgcagtccg ttgtggaaac 240 ttacgagccc aatacattgg gccacgattt aattagggat cttatatctg ttgtaagggc 300 ccgtgactat gtcgaagcga ccaggcgata taatcatttc cacgcccgcc tcgaaggttc 360 gccgaaggct gaacttcgac agcccataca gcagccgtgc tgctgtcccc attgtccaag 420 gctcaaacaa gcgacgatca tggacgtaca ggcccatgta ccggaagccc agaatataca 480 gaatgtatcg aagccctgat gttcctcgtg gatgtgaagg cccatgtaaa gtccagtctt 540 atgagcaacg ggttgatatt aagcatactg gtattgatcg ttgtgttagt gatggtactc 600 gtggatctgg aattactcac agagtgggta agaggttctg tgttaaatcg atatattttt 660 taggtaaagt ctggatggat gaaaatatca cgaagcagaa tcacactaat caggtcatgt 720 tcttcttggt tcgtgataga aggccctctg gaaacagccc aatggatttt ggacaggttt 780 ttaatatgtt cgataatgag cccagtaccg caactgtgaa gaatgatttg cgggatgggt 840 ttcaagtgat gaggaaattt catgctacag ttatcggtgg gccctctgga acgaaggaac 900 aggcattagt taagagattt tttagaatta acagtcatgt aacttataat catcaggagg 960 cagccaagta tgtgaaccat actgaaaacg ccttgttatt gtatatggca tgtacgcatg 1020 cctctaatcc agtatatgca actatgaaaa tacgcatcta tttctatgat tcaatatcaa 1080 attaataaaa tttatatttt atatcatgag ttgctgttac atttattgtg ttttcaatta 1140 catcatacaa tacatgatca actgctctga ttacattgtt aattgaaatt acaccaagac 1200 tatataaata cttaagaact tgatatctaa atactcttaa gaaacgacca gtctgaggct 1260 gtaatgtcgt ccaaattcgg aagttgagaa aacatttgtg aatccccaat gccttcctga 1320 tgttgtggtt gaatcttatc tgaatggaaa tgatgtcgtt gttcattaga aatggcctct 1380 ggctgtgatc tgttatcttg aaatagaggg gattgtttat ctcccagata aaaacgccat 1440 tctctgcttg aggagcagtg atgagttccc ctgtgcgtga atccatgatt gttgcagttg 1500 atgtggaggt agtatgagca gccacagtct aggtgtacac gcttacgcct tattggtttc 1560 ttcttggcta tcttgtgttg gaccttgatt gatacttgcg aacagtggct cgtagagggt 1620 gacgaagatt gcattcttga gagcccaatt tttcaaggat atgttttttt cttcgtctag 1680 atattcccta tatgaggagg taggtcctgg attgcagagg aagttagtgg gaattccccc 1740 tttaatttga atgggcttcc cgtactttgt gttgctttgc cagtccctct gggcccccat 1800 gaattccttg aagtgcttta aataatgcgg gtctacgtca tcaatgacgt tgtaccacac 1860 atcattactg tacacctttg agcttaggtc tagatgtcca cataaataat tatgtgggcc 1920 tagagacctg gcccacattg ttttgcctgt tctgctatca ccctcaatga caatacttat 1980 gggtctccat ggccgcgcag cggaagatac ggcgttctcg gcgacccact cgtcaagttc 2040 atctggaact tgattaaaag aagaagaaag aaatggagaa atataaactt ctaaaggagg 2100 attaaaaatc atatctaaat ttgaacttaa attatgaaat tgtaaaatat agtcctttgg 2160 ggccttctct tttaatatat tgagagcctc ggatttactg cctgaattga gtgcctcggc 2220 atatgcgtcg ttggcagatt gctgacctcc tctagctgat ctgctattga tttggaaaac 2280 tccaaaatca atgaagtctc cgtctttctc cacgtaggtc ttgacatctg ttgagctctt 2340 agctgcctga atgttcggat ggaaatctgc tgacctgttt ggggatacca ggtcgaagaa 2400 gcgttggttc ttacattggt atttgccttc gaattggata agcacatgga gatgtggttc 2460 cccattctcg tggagttctc tgcaaacttt gatgtatttt atatttgacg gggtttctag 2520 gttttttaat tgggaaagtg ctgcctcttt agagagagaa caattgggat atgttaggca 2580 ataatttttg gcatatattt taaataaacg aggcatgttg aaatgaattg gtgtccctca 2640 aagctctatg gcaatcggtg tatcggtgtc ttacttatac ctggacacct aatggctatt 2700 tggtaatttt gtaaaagtac attgcaattc aacattcaaa attcaaaaat caaatcaata 2760 aagcggccat ccgtataata tt 2782 //