ID KC312656; SV 1; circular; genomic DNA; STD; VRL; 2781 BP. XX AC KC312656; XX DT 24-MAR-2013 (Rel. 116, Created) DT 24-MAR-2013 (Rel. 116, Last updated, Version 1) XX DE Tomato yellow leaf curl virus isolate AH-HF, complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RA Xue D., Li J., Xu X.; RT "Phylogenetic analysis and application of multiplex PCR in detection of RT Tomato yellow leaf curl virus in China"; RL Unpublished. XX RN [2] RP 1-2781 RA Xue D., Li J., Xu X.; RT ; RL Submitted (07-DEC-2012) to the INSDC. RL College of Horticulture, Northeast Agricultural University, No. 59, MuCai RL Road, Harbin, Hei Longjiang 150030, China XX DR MD5; 8531398258d4c529dc8b833f2fafbe85. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="Tomato yellow leaf curl virus" FT /host="Solanum lycopersicum" FT /isolate="AH-HF" FT /mol_type="genomic DNA" FT /country="China:AnHui, HeFei" FT /collection_date="12-Oct-2012" FT /db_xref="taxon:10832" FT gene 148..498 FT /gene="AV2" FT CDS 148..498 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:M4QKY5" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:M4QKY5" FT /protein_id="AGH27755.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLLSVEETYEPNTLGRDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPSCCPHCPRHKQATIMVVQAHV FT PEAQNIQNVSKP" FT gene 308..1084 FT /gene="AV1" FT CDS 308..1084 FT /codon_start=1 FT /gene="AV1" FT /product="AV1 protein" FT /db_xref="GOA:M4QH77" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:M4QH77" FT /protein_id="AGH27756.1" FT /translation="MSKRPGDIIISTHVSKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW FT SYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQAYEQRDDIKHTGIVRCASDVTRGSGVTH FT RVGKRFCVKSIYFLRKVWMDENIKKQNHTNQVMFFFVRDRRPYGNSPMDFGQVFNMFDN FT EPSTANVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT THTENALLLYMACTHATNPVYAAMKIRIYFYDSISN" FT gene complement(1081..1485) FT /gene="AC3" FT CDS complement(1081..1485) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:M4QH10" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:M4QH10" FT /protein_id="AGH27757.1" FT /translation="MDSHTGELISAPQAENGVFIWEINNPLYFEITEYSQRPFLMNDDI FT ISIQIRFNHNTRKVLGIHKCFLNFRIWTTLQPQTGRFLRVFRYQVLKYLDSLGVISINN FT VIRPVDHVLYDVLENTINVTETHDIKYKFY" FT gene complement(1226..1633) FT /gene="AC2" FT CDS complement(1226..1633) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:M4QU76" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:M4QU76" FT /protein_id="AGH27758.1" FT /translation="MQPSSPSTSHCSQVSIKVQRNIAKKKPIRRKRVDLNCGCSYYLHI FT NCNNHGFTHRGTHLCSSSREWRFYLGDKQSPLFRDNRIQPEAISNERRHHFHSDKIQPQ FT HQEGIGDSQMFSQLPNLDDITASDWSFLKSI" FT gene complement(1542..2615) FT /gene="AC1" FT CDS complement(1542..2615) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:M4QJJ6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:M4QJJ6" FT /protein_id="AGH27759.1" FT /translation="MPRLFKIYAKNYYLTYPNCSLTKVEALSQLKNLQTPTNKKYIKVC FT RELHENGEPHLHVLIQFEGKYQCKNHRFFDLVSPNRSAHFHPNIQAAKSSTDVKTYVEK FT DGDFIDFGVFQIDGRSTRGGQQSANDSYAEALNSGSKSEALNILKEKAPKDYILQFHNL FT SSNLDRIFSPPLEVYVSPFLYSSFNQVPDELEDWVAENVVSSAARPWRPISIVIEGDSR FT TGKTMWARSLGPHNYLCGHLDLSPKVYSNNAWYNVIDDVDPHYLKHFKELMGAQRDWQS FT NTKYGKPIQIKGGIHTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATLVTLYEPLFA FT SINQGPTQYSQEETNKA" FT gene complement(2171..2464) FT /gene="AC4" FT CDS complement(2171..2464) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:M4QKY9" FT /protein_id="AGH27760.1" FT /translation="MGNHISMCLSNSKANTNVRTIGSSTWYPQTGQHISIRTFRQLRAQ FT QMSRPTWRKTETSLILEFSKSMGDQLEEVNNLPTTHMPRHSIQAVNPRPSIY" XX SQ Sequence 2781 BP; 756 A; 524 C; 612 G; 889 T; 0 other; accggatggc cgtgcctttt ctttttacgt ggtccccacc agggttacac agacgttact 60 gtcaaccaat caaattgcat cctcaaacgt tagataagtg ttcgtttgtc tttatatact 120 tggtccccaa gtagtttgtc ttgcactatg tgggatccac ttctaaatga atttcctgaa 180 tctgttcacg gatttcgttg tatgttagct attaaatatt tgctgtccgt tgaggaaact 240 tacgagccca atacattggg ccgcgattta attagggatc ttatatctgt tgtaagggcc 300 cgtgactatg tcgaagcgac caggcgatat aatcatttcc acgcacgtct cgaaggttcg 360 ccgaaggctg aacttcgaca gcccatacag cagccgagct gctgtcccca ttgtccaagg 420 cacaaacaag cgacgatcat ggtcgtacag gcccatgtac cggaagccca gaatatacag 480 aatgtatcga agccctgatg ttcctcgtgg atgtgaaggc ccatgtaaag tccaggctta 540 tgagcaacgg gatgatatta agcatactgg tattgttcgt tgtgctagtg atgttactcg 600 tggatctgga gttactcaca gagtgggtaa gaggttctgt gttaaatcga tatatttttt 660 acgtaaagtc tggatggatg aaaatattaa gaagcagaat cacactaatc aggtcatgtt 720 cttctttgtt cgtgatagaa ggccttatgg aaacagccca atggattttg gacaggtttt 780 taatatgttc gataatgagc ccagtaccgc aaacgtgaag aatgatttgc gggataggtt 840 tcaagtgatg aggaaatttc atgccacagt tattggtggg ccctctggaa tgaaggaaca 900 ggcattagtt aagagatttt ttagaattaa cagtcatgta acttataatc atcaggaggc 960 agccaagtat gagacccata ctgaaaacgc cttgttattg tatatggcat gtacgcatgc 1020 cactaatcca gtgtatgcag ctatgaaaat acgcatctat ttctatgatt caatatcaaa 1080 ttaataaaat ttatatttta tatcatgagt ttctgttaca tttattgtgt tttcaagtac 1140 atcatacaat acatgatcaa ctggtctgat tacattgtta attgaaatta caccaagact 1200 atctaaatac ttaagaactt gatatctaaa tactcttaag aaacgaccag tctgaggctg 1260 taatgtcgtc caaattcgga agttgagaaa acatttgtga atccccaata ccttcctggt 1320 gttgtggttg aatcttatct gaatggaaat gatgtcgtcg ttcattagaa atggcctctg 1380 gctgtattct gttatctcga aatagagggg attgtttatc tcccagataa aaacgccatt 1440 ctctgcttga ggagcagaga tgagttcccc tgtgtgtgaa tccatgattg ttgcagttga 1500 tgtggaggta gtatgagcag ccacagttta ggtctacacg cttacgcctt attggtttct 1560 tcttggctat attgcgttgg accttgattg atacttgcga acagtggctc gtagagggtg 1620 acgagggttg cattcttgag agcccaattt ttcaaggata tgtttttttc ttcgtctaga 1680 tattccctat atgaggaggt aggtcctgga ttgcagagga agatagtgtg aattccccct 1740 ttaatttgaa tgggcttccc gtactttgtg ttgctttgcc agtccctctg ggcccccatt 1800 aattccttga agtgctttaa ataatgcggg tctacgtcat caatgacgtt gtaccacgca 1860 ttattactgt acacctttgg gcttaggtct agatgtccac ataaataatt atgtgggcct 1920 agagacctgg cccacattgt tttgcctgtt ctgctatcac cctcaatgac aatacttatg 1980 ggtctccatg gccgcgcagc ggaagatacg acgttctcgg cgacccagtc ttcaagttca 2040 tctggaactt gattaaaaga agaataaaga aatggagaaa cataaacttc taaaggagga 2100 ctaaaaatcc tatctaaatt ggaacttaaa ttatgaaatt gtaaaatata gtcctttggg 2160 gccttctctt ttaatatatt gagggcctcg gatttactgc ctgaattgag tgcctcggca 2220 tatgagtcgt tggcagattg ttgacctcct ctagttgatc tcccatcgat ttggaaaact 2280 ccaaaatcaa tgaagtctcc gtctttctcc acgtaggtct tgacatctgt tgagctctta 2340 gctgcctgaa tgttcggatg gaaatgtgct gacctgtttg gggataccag gtcgaagaac 2400 cgatggttct tacattggta tttgccttcg aattggataa gcacatggag atgtggttcc 2460 ccattctcgt ggagttctct gcaaactttg atatattttt tatttgttgg ggtttgtagg 2520 ttttttaatt gggaaagtgc ttccacttta gtgagagaac aattgggata tgttaggtaa 2580 taatttttgg catatatttt aaataaacga ggcatgttga aatgaattgg tgtccctcaa 2640 agctctatgg caatcggtgt atcggtgtct tacttatatc tggacaccta atggctattt 2700 ggtaattttg taaaagtaca ttgcaattca aaattcaaaa ttcaaaaatc aaatcattaa 2760 agcggccatc cgtataatat t 2781 //