ID   KC305093; SV 1; circular; genomic DNA; STD; VRL; 1367 BP.
XX
AC   KC305093;
XX
DT   21-MAR-2013 (Rel. 116, Created)
DT   17-JUL-2014 (Rel. 121, Last updated, Version 3)
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DE   Cotton leaf curl Multan alphasatellite clone BW02_A04, complete sequence.
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KW   .
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OS   Cotton leaf curl Multan alphasatellite
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae; Colecusatellite.
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RN   [1]
RP   1-1367
RX   DOI; 10.1128/JVI.02911-13.
RX   PUBMED; 24719407.
RA   Kumar J., Kumar J., Singh S.P., Tuli R.;
RT   "Association of satellites with a mastrevirus in natural infection:
RT   complexity of wheat dwarf India virus disease";
RL   J. Virol. 88(12):7093-7104(2014).
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RN   [2]
RP   1-1367
RA   Kumar J., Tuli R.;
RT   "Association of alphasatellite with a mastrevirus in natural infection";
RL   Unpublished.
XX
RN   [3]
RP   1-1367
RA   Kumar J., Tuli R.;
RT   ;
RL   Submitted (08-DEC-2012) to the INSDC.
RL   Agri-Biotechnology, National Agri-Food Biotechnology Institute, India,
RL   C-127, Phase-8, Mohali, Punjab 160071, India
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DR   MD5; cc648331236bd3f237f8834d6ed274c6.
DR   EuropePMC; PMC4054350; 24719407.
DR   EuropePMC; PMC4136368.
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..1367
FT                   /organism="Cotton leaf curl Multan alphasatellite"
FT                   /host="wheat"
FT                   /isolate="Wellington"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /collection_date="2011"
FT                   /clone="BW02_A04"
FT                   /db_xref="taxon:1048668"
FT   gene            77..1024
FT                   /gene="alpha-rep"
FT   CDS             77..1024
FT                   /codon_start=1
FT                   /gene="alpha-rep"
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:M4Q970"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:M4Q970"
FT                   /protein_id="AGH20698.1"
FT                   /translation="MPTIQSQWWCFTVFFLSATAPDLVPLFENTHVSYACWQEEESPTT
FT                   RRRHLQGYLQLKGKRSFSQVKALFGDLNPHLEKQRARKTDEARDYCMKEETRVSGPFEF
FT                   GDYCPVGSHKRRQRESVIRSPVRMAEENPSVFRRVKAKIAEEEFQKTAKEIQISNLKSW
FT                   QSRLKTLLERDPDDRTIFWVYGPDGGEGKSTFARDLYRSGSWFYTRGGSADNVAYQYIG
FT                   CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDF
FT                   EKISVDRVHVIPCIPCGVCLKHHVGEIKCEEYLE"
XX
SQ   Sequence 1367 BP; 406 A; 256 C; 319 G; 386 T; 0 other;
     acccagcctc ggttccctct ccttggttcc ctcgtgcttt tcacgtgctc tctctcttct        60
     gtgtttttaa gcgaagatgc ctactattca gtcacaatgg tggtgtttta ctgtcttctt       120
     cctttctgcg accgctcccg atctggttcc tctcttcgag aacacccacg ttagttacgc       180
     ctgctggcag gaagaagagt cgccgacgac tcgacgacgc cacttgcagg gctacctgca       240
     attgaagggg aaaagaagct tttcgcaggt taaggcactg ttcggagacc tgaaccccca       300
     cctggagaaa caacgtgcgc gtaagaccga cgaagctcgg gattactgta tgaaagagga       360
     aactagggtt tccggtcctt ttgaatttgg ggattactgt cctgttggtt ctcacaaacg       420
     acgacaacga gaatctgtaa ttcgaagtcc ggtgagaatg gctgaggaga atccgtccgt       480
     cttccgacga gtcaaggcaa agattgctga ggaagaattc cagaagaccg ccaaggagat       540
     tcaaatttca aatttgaaat cttggcaatc gcgcctgaag acgctcctcg aacgggaccc       600
     agatgaccgc actatcttct gggtttacgg acctgatggt ggggaaggaa aatccacctt       660
     tgccagagac ctgtacagaa gtgggtcctg gttctataca cgtggaggat ctgcagataa       720
     tgtagcttac cagtacatag gatgtttagg gaataatatt gtatttgata ttcctcgtga       780
     taagaaggat tatctacaat acagtttaat agagatgttt aaggatagat taatagttag       840
     taataagtat gagcctctga tggctccctt aattaattgt atccatgtag ttgtgatgtc       900
     taattttctc ccagactttg agaagattag cgtagataga gtccatgtaa tcccatgtat       960
     tccttgtggt gtttgtctta agcatcatgt tggtgaaata aaatgtgagg aatatttgga      1020
     ataatctgag atgtttaccg tataatagat tatattaaag agagaagggc cgcgcagcgg      1080
     caataacatg agtaattttg cttcttgaaa acaagaagga atgaaatgaa aaaagaaata      1140
     aaaaaaaatt gtaatataaa gatgtgggac ccacatttat attgaaataa aaataaatat      1200
     aaaaataact aaataaatat cactattcat tttgcggaag gacataattg taaataatga      1260
     aagttttggg taacgcggtg taattttaaa agactttagg gtgtgcgctt gcaatttgcc      1320
     gggatcctag gatataaata acacgtcacc gaggctggtg tagtatt                    1367
//