ID   KC294570; SV 1; linear; genomic RNA; STD; VRL; 777 BP.
XX
AC   KC294570;
XX
DT   18-MAR-2013 (Rel. 116, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 2)
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DE   Tomato spotted wilt virus strain YN-2 nucleocapsid protein (N) gene,
DE   complete cds.
XX
KW   .
XX
OS   Orthotospovirus tomatomaculae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus.
XX
RN   [1]
RP   1-777
RA   Sun S., Zhang D., Liu Y., Zhu C.;
RT   ;
RL   Submitted (30-NOV-2012) to the INSDC.
RL   Hunan Plant Protection Institute, Hunan Plant Protection Institute,
RL   Mapoling, Furong District, Changsha, Hunan 410125, China
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DR   MD5; 54df38035af2a197c192976f39c6249f.
XX
CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..777
FT                   /organism="Orthotospovirus tomatomaculae"
FT                   /host="iris"
FT                   /strain="YN-2"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Jul-2012"
FT                   /db_xref="taxon:3052585"
FT   gene            1..777
FT                   /gene="N"
FT   CDS             1..777
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:M4PXL5"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:M4PXL5"
FT                   /protein_id="AGH12864.1"
FT                   /translation="MFKVKLTKENIVALLTQGKDLEFEEDQNLVAFNFKTFCLENLDQI
FT                   KKMSIISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL
FT                   VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS
FT                   VVLAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS
FT                   NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLTELA"
XX
SQ   Sequence 777 BP; 260 A; 130 C; 169 G; 218 T; 0 other;
     atgtttaagg ttaagctcac taaggaaaac attgttgctt tgttgacaca aggcaaagat        60
     cttgaatttg aagaagatca gaatctggta gcatttaact tcaagacttt ttgtctggaa       120
     aaccttgacc agatcaagaa gatgagcatt atttcatgtc tgacatttct gaagaatcgt       180
     cagagtataa tgaaggttat taagcaaagt gattttactt ttggcaaaat cactataaag       240
     aaaacttcag acaggattgg agccactgac atgaccttca gaaggcttga tagcttgatc       300
     agggtcaggc ttgtcgagga aactgggaat tctgagaatc tcaatactat caaatctaag       360
     attgcttctc accctctgat tcaagcctat ggattacctc ttgatgatgc aaagtctgtg       420
     aggcttgcca taatgctggg aggtagctta cctcttattg cttcagttga tagctttgag       480
     atgatcagtg ttgtcttggc tatatatcag gatgcaaaat acaaagacct cgggatcgat       540
     ccaaagaagt atgacaccag ggaagcctta ggaaaagttt gcactgtgct aaaaagcaaa       600
     gcatttgaaa tgaatgaaga tcaggtgaag aaagggaaag agtatgctgc tatacttagc       660
     tccagcaatc ctaatgctaa aggaagtatt gctatggaac attacagtga aactcttaac       720
     aagttctatg aaatgttcgg ggttaaaaaa caggcaaaac tcacagaact tgcttaa          777
//