ID KC290943; SV 1; linear; genomic RNA; STD; VRL; 2744 BP. XX AC KC290943; XX DT 23-JAN-2013 (Rel. 115, Created) DT 11-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Hippeastrum chlorotic ringspot virus isolate ZDH-2007 segment S, complete DE sequence. XX KW . XX OS Hippeastrum chlorotic spot virus OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus; OC Hippeastrum chlorotic ringspot orthotospovirus. XX RN [1] RP 1-2744 RX PUBMED; 23306942. RA Dong J.H., Yin Y.Y., Fang Q., McBeath J.H., Zhang Z.K.; RT "A new tospovirus causing chlorotic ringspot on Hippeastrum sp. in China"; RL Virus Genes 46(3):567-570(2013). XX RN [2] RP 1-2744 RA Dong J.H., Yin Y.Y., Fang Q., McBeath J.H., Zhang Z.; RT ; RL Submitted (04-DEC-2012) to the INSDC. RL Biotechnology and Genetic Germplasm Institute, Yunnan Academy of RL Agricultural Sciences, 9# Xueyun Road, Wuhua District, Kunming, Yunnan RL 650223, China XX DR MD5; 4c831a900be70c40cfa082ad8a5239b4. DR EuropePMC; PMC4263035; 25465801. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2744 FT /organism="Hippeastrum chlorotic spot virus" FT /segment="S" FT /host="Hippeastrum sp." FT /isolate="ZDH-2007" FT /mol_type="genomic RNA" FT /country="China" FT /collected_by="Qi Fang" FT /collection_date="04-Jun-2007" FT /db_xref="taxon:2736661" FT gene 74..1411 FT /gene="NSs" FT CDS 74..1411 FT /codon_start=1 FT /gene="NSs" FT /product="nonstructure protein" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:L7UVK3" FT /protein_id="AGC54618.1" FT /translation="MSTVKTTAVEFFSNYGLSCDSRSINDCYRVFSSRGETLMDVFMHS FT TIGIKSAFSITGLGESEDIKTHEAEIIDEHHNYNVFEKFGLDMNFCNHFLEITVKKPSV FT KNYETKFQMHNQIFEPSEQLISYGMGKITEKDFYNCSKISPEDIYPSDWFINEAKKKNF FT YMADISGFSMDWGFSVMGRTTSYWKENMEKTSLVSVKQKSAAFPSVPTNRVLSVSTIKA FT VEIVSKIACDKSTILSVRQDLRSDLRTQFRISLPGEYSDTSVARTYLLHQGSKGQYICI FT YARTTMDSPNERTTLIIKIFTQSKPGGFTTTLLPNDHSNCRKMVGASFGIVEQKMTDPN FT YNKIIAHELLSVHTNFALKISKVLQKPVIVYKVYEKELPPKRVEIDGRTFNYQEDIDGN FT IYFLSTTLAILPLSLSVLSYLDSASPPCWKESKGLGHFTVEEIQYI" FT gene complement(1849..2673) FT /gene="N" FT CDS complement(1849..2673) FT /codon_start=1 FT /gene="N" FT /product="nucleocapsid protein" FT /db_xref="GOA:L7UUL1" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:L7UUL1" FT /protein_id="AGC54619.1" FT /translation="MSTARLSKANVEKLLAGGEADVEIEAEETTGFNFKEFVLANGNVK FT MTFNNGYTILRNRAAIYKMVKAGNFKFQGKPIVVPNATSNPGQEDWTFRRLEGFIRAKM FT FMELLAVENSTEQQKMYEKLCDLPMVNAYGLKPSPRFDATTARVMLTLGGPLPLMASLD FT KFAAAAFPLAYFQNVKKEAQGINKFSTYEQLCKIARVMATKEFVFTGTAKEIFEETIKI FT LNDCTPGTTGAASLNKFNEQIKALENVFGKIVDDNEASSSKPRSASKKNQGF" XX SQ Sequence 2744 BP; 883 A; 536 C; 475 G; 850 T; 0 other; agagcaatcg gggtacaaaa caaataatca tacacagctt gaatcacaat aagcaagaaa 60 tactaactca gccatgtcta ccgttaaaac aacagcagtt gaattcttct ccaactacgg 120 gttatcttgc gattcccgtt ctatcaatga ctgttacagg gtattctcta gcagaggaga 180 aaccctcatg gatgtcttta tgcactcaac tattggcatc aaatctgctt tcagtataac 240 tggacttgga gaaagtgagg acataaagac tcatgaagca gaaatcattg atgaacatca 300 caattataat gtctttgaga agtttggctt agacatgaat ttctgcaacc actttttgga 360 gataactgta aaaaaaccat ctgtgaaaaa ctatgagaca aaattccaaa tgcacaatca 420 aatattcgag ccttcagaac agctgattag ctatggtatg ggtaaaataa cagagaaaga 480 tttttacaac tgttctaaga tctctcctga agacatatac ccaagtgatt ggtttatcaa 540 tgaagctaag aaaaagaact tttacatggc cgacatctct gggttcagca tggactgggg 600 tttttctgta atgggaagga caacatctta ctggaaagaa aacatggaaa aaacatcact 660 ggtttctgtg aagcagaaat cagcagcttt tccttcagtg cctacaaaca gagtactatc 720 tgtttccaca atcaaagcgg ttgaaatagt ctctaaaatt gcatgtgata aatcaactat 780 cctctcagtc aggcaagact tgagatcaga tctaagaact caattcagga tctcactgcc 840 tggagaatac agcgatacta gtgttgccag aacctacttg ctccatcagg gcagtaaagg 900 gcagtatata tgcatttatg caagaactac tatggacagt cctaatgaga gaactacatt 960 gataataaaa atcttcactc aaagcaaacc aggtggtttc accacaacac ttcttccgaa 1020 tgatcactcc aactgtagaa aaatggttgg agctagtttt ggcatagttg aacaaaaaat 1080 gacagatcct aattacaata aaataattgc tcatgagcta ttgtctgtgc acacaaactt 1140 tgccttaaaa atatcaaaag ttttacaaaa gcctgtgata gtgtacaaag tctatgagaa 1200 agaactccct ccaaagagag tagaaataga cggcagaacg ttcaactacc aagaagacat 1260 tgatggtaat atttactttc tgtcaacaac tttggcaatt ttgcctctat ctctttctgt 1320 tttgtcttat ctggattctg cctccccacc ctgttggaag gagtctaaag gtttgggcca 1380 cttcactgta gaggaaatcc agtatattta attataacta gcttttaaga tattagagtt 1440 atatcaacct aatccactct caatgtatgt aaataaatca tttaaatata agccaataaa 1500 tcaaaaacaa caaaaaaatc aaattttaaa ttaaaaacca aaaaaccaaa aaaaccaaaa 1560 aacccaaaaa aaccaaaaag agccttcggg ccgattgtgg tttccttacc tattacaagc 1620 atcagtaaga aaaccatgat ttgcccgaag gctttttttg ttttttggtt ttttggtttt 1680 tttgggtttt gtttatttat ttatttttat ttcttttatt tattattgtt ttgagttttt 1740 attttgtagt tttattttat ttaaggtttt tttatgaaac acaataaaca cacaaacatt 1800 tgcaagctac ataatgcaca aatcatcaac caagaattaa gagatcaatc agaatccttg 1860 attcttctta gaagcagacc taggttttga agaactagct tcattatcat caacaatttt 1920 accaaaaaca ttctccagag ctttaatctg ctcattgaat ttgttcaatg aagcagcacc 1980 agttgtcccg ggagtgcagt cattcagaat ttttatggtc tcttcaaaaa tctctttagc 2040 agtcccagtg aaaacaaatt cttttgttgc cataactctg gctattttac atagctgctc 2100 ataagtagag aatttgttga tgccctgagc ctctttttta acattctgga aatatgccag 2160 cgggaatgca gctgcagcaa atttgtctaa gcttgccatt agggggagag gaccacctaa 2220 tgttagcatt actcttgcag tggttgcatc aaatctgggg ctaggtttca agccatatgc 2280 attgaccata gggaggtcac acagtttttc atacattttt tgctgctcag ttgaattctc 2340 tacagcaagc agttccataa acattttggc tctaatgaaa ccctccaatc tcctgaacgt 2400 ccaatcttct tgtccagggt tggaagtagc attgggaacc acaatgggtt tcccttggaa 2460 tttaaaattc cctgctttca ccattttgta aatggcagct ctatttctca aaatggtgta 2520 accgttgtta aaagtcattt tcacgttgcc attagccaat acaaattcct tgaagttgaa 2580 tcctgtggtt tcttcagctt caatctctac atctgcttcg ccacctgcaa gaagcttctc 2640 aacgttcgct ttgctcaacc ttgcggtaga catggtgttt acttaggaag ctgcttactt 2700 ggctgaagtt gttcagaatt tatgttttat acctcgattg ctct 2744 //