ID   KC282642; SV 1; circular; genomic RNA; STD; VRL; 1356 BP.
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AC   KC282642;
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DT   20-FEB-2013 (Rel. 115, Created)
DT   20-FEB-2013 (Rel. 115, Last updated, Version 1)
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DE   Tomato leaf curl Java virus betasatellite clone R7, complete sequence.
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KW   .
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OS   Tomato leaf curl Java betasatellite
OC   Viruses; Tolecusatellitidae; Betasatellite.
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RN   [1]
RC   Publication Status: Available-Online prior to print
RP   1-1356
RX   DOI; 10.1007/s11262-013-0888-0.
RX   PUBMED; 23397078.
RA   Shahid M.S., Yoshida S., Khatri-Chhetri G.B., Briddon R.W., Natsuaki K.T.;
RT   "Complete nucleotide sequence of a monopartite Begomovirus and associated
RT   satellites infecting Carica papaya in Nepal";
RL   Virus Genes 46(3):581-584(2013).
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RN   [2]
RP   1-1356
RA   Shahid M.S., Yoshida S., Khatri-Chhetri G.B., Briddon R.W., Natsuaki K.T.;
RT   ;
RL   Submitted (02-DEC-2012) to the INSDC.
RL   Tokyo Nodai, Tokyo University of Agricultrue Japan, 1-1-1 Sakuragaoka,
RL   Setagaya-Ku, Tokyo, Japan, Tokyo 156-8502, Japan
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DR   MD5; 025a5cb75947cdcc650a6783eb1b44b7.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1356
FT                   /organism="Tomato leaf curl Java betasatellite"
FT                   /host="Carica papaya"
FT                   /mol_type="genomic RNA"
FT                   /country="Nepal"
FT                   /isolation_source="leaves"
FT                   /collected_by="B.J. Pudashini and K.T. Natsuaki"
FT                   /collection_date="25-Nov-2010"
FT                   /clone="R7"
FT                   /db_xref="taxon:53991"
FT   gene            complement(190..546)
FT                   /gene="C1"
FT   CDS             complement(190..546)
FT                   /codon_start=1
FT                   /gene="C1"
FT                   /product="beta C1 protein"
FT                   /db_xref="InterPro:IPR018583"
FT                   /db_xref="UniProtKB/TrEMBL:M1KJU3"
FT                   /protein_id="AGF37248.1"
FT                   /translation="MTISYSNSKGMIFIINIKFRSEIQFTVEVEVFSTKSPALVKHKFS
FT                   IPYGHNGIIPPFNFNALEEGIKNLLRIMYRDSTIEEFKSEDMVEIIDMMIQQEAPVIDI
FT                   QVNDEYHVYKNVTV"
XX
SQ   Sequence 1356 BP; 459 A; 223 C; 250 G; 424 T; 0 other;
     accggtggcg agcggggtct ttggggtttt gggtgggccc cacacacaaa acagatctgg        60
     agaacgtgag tgggccaaat aaatgggccg ttgaattggg ctctttattc aaaacaatac       120
     tctatttact aagcccatta ttattcattt aaaaaaatta cattatacat agtccgtata       180
     aatgtacatt tatacggtta cattcttata cacatggtat tcgtcgttta cttgtatatc       240
     tattactgga gcctcttgtt gtatcatcat atctatgatt tcaaccatgt cttctgattt       300
     gaactcttct attgttgaat ctctatacat gatccttagt aagttcttga taccttcttc       360
     taaagcattg aaattgaatg gtggtatgat gccattatgt ccgtatggga ttgagaactt       420
     gtgcttaact agagctggtg actttgttga aaacacctct acctcaactg tgaattgtat       480
     ttctgatctg aacttgatgt tgattatgaa tatcattcct ttactgttgc tatatgatat       540
     agtcatattt gtttgatgga aatatattca ttggaactgt tacttatagt tgaaattata       600
     tttggtgtgt ggatgttatt aatgttcgtg tcaaatatgt gttctttcat tactaagtgc       660
     atctctgact gtattgattt ggatgtttca ttataaaaga agatattaat gcgaacaaga       720
     aaacaagaaa aagaaaggaa aaagatggaa aaatataaaa aaaaatacat aaaaaaacta       780
     ataataaaac taactatcta ttcagaaata atggccgcgc agcggcaaca aaaccaaaaa       840
     acaatatcaa tggaaacctt tataaaataa atagacagaa ttgaaaagga aaaaagaaaa       900
     aaataaaaga taaaactgaa caaaaagaaa ataaaaaaaa ataaataaat taatttaatt       960
     aatgctaaaa cactaattaa ttgcaattaa aactgttaaa aaataattac cgccgtaatt      1020
     atttgatttt tactgcggag gttaatattg aaggtaaatt cctggactcc aataggtaaa      1080
     tgggacaccg atatatcggt gtctcaattg gggtattggt gtcccttatt tttaactttc      1140
     ccattttgcc cttaaagatg tgtctgtaag gcgcgtggga gtggcctgaa aaagtacact      1200
     ttctctctcc aaaactcccc ggagaagacg atacaggctg atcccgacct caatttgcga      1260
     cacgcgcggc ggtgtgtacc cctgggaggg taggtaccac acgctacgca gcagccttag      1320
     ctacgccgga gcttagctcg ccaccgttat aatatt                                1356
//