ID KC261964; SV 1; linear; genomic RNA; STD; VRL; 2975 BP. XX AC KC261964; XX DT 04-JUN-2013 (Rel. 117, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 2) XX DE Tomato spotted wilt virus isolate TSWV-10 segment S, complete sequence. XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2975 RX PUBMED; 23696821. RA Lian S., Lee J.S., Cho W.K., Yu J., Kim M.K., Choi H.S., Kim K.H.; RT "Phylogenetic and recombination analysis of tomato spotted wilt virus"; RL PLoS One 8(5):E63380(2013). XX RN [2] RP 1-2975 RA Lian S., Lee J.-S., Cho W.K., Kim K.-H.; RT ; RL Submitted (27-NOV-2012) to the INSDC. RL Department of Agricultural Biotechnology, Seoul National University, RL Gwanakno 599, Seoul 151-921, South Korea XX DR MD5; 07f1cb34ab494108cf9d96549698e231. XX CC GenBank Accession Numbers KC261962-KC261964 represent sequences CC from the 3 segments of Tomato spotted wilt virus isolate TSWV-10. CC CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2975 FT /organism="Orthotospovirus tomatomaculae" FT /segment="S" FT /host="Stellaria aquatica" FT /isolate="TSWV-10" FT /mol_type="genomic RNA" FT /country="South Korea" FT /collection_date="Sep-2009" FT /db_xref="taxon:3052585" FT gene 89..1492 FT /gene="NSs" FT misc_feature 89..1492 FT /gene="NSs" FT /note="nonfunctional nonstructural protein due to mutation" FT gene complement(2048..2824) FT /gene="N" FT CDS complement(2048..2824) FT /codon_start=1 FT /gene="N" FT /product="nucleocapsid protein" FT /db_xref="GOA:Q1PBV3" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:Q1PBV3" FT /protein_id="AGM53730.1" FT /translation="MSKVKLTKENIVALLTQSKDLEFEEDQNLVAFNFKTFCLENLDQI FT KKMSIISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL FT VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS FT VVLAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS FT NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLAELA" XX SQ Sequence 2975 BP; 950 A; 546 C; 471 G; 1008 T; 0 other; agagcaattg tgtcataatt ttattcttaa tcaaacctca cttagaaaat cgcaatactg 60 taataagaac acagtaccaa taaccataat gtcttcaagt gtttacgagt cgatcattca 120 gacaaaagct tcagtctggg gatcaactgc atctggtaaa gctgttgtag attcttactg 180 gattcatgaa cttggtactg gttctccact agttcaaacc cagttgtatt ctgattcaag 240 aagcaaaagt agctttggct atactgcaaa ggtagggaat cttccctgtg aagaagaaga 300 gattctttct cagcatgtgt atatccctat ttttgatgat attgatttta gcatcaatat 360 taatgactct gttctggcac tatctgtttg ctcaaataca gtcaatacta acggagtgaa 420 acatcaaggt catttgaaag ttttgtctcc tgctcagctc cactctattg gatctaccat 480 gaacagatct gatattacag accgattcca gctccaagaa aaagacataa ttcccaatga 540 cagatacatt gaagctgcaa acaagggctc tttgtcttgt gttaaagagc atacctataa 600 ggtcgagatg tgctacaatc aagctttggg caaagtgaat gttctatccc ctaacagaaa 660 tgtccatgaa tggctgtact gtttcaagcc aaatttcaat caagttgaaa gcaacaacag 720 aactgtaaat tctcttgcag tgaaatctct gctcatgtca gcagaaaaca acatcatgcc 780 taactctcag gcttttgtaa aagcttccac tgattctcat ttcaaactga gcctctggct 840 aagagttcca aaggttttaa agcagatttc cattcagaaa ttgttcaaag ttgcaggaga 900 tgaaacaaac aaaacatttt atttatctat tgcttgcatt ccaaaccata atagtgttga 960 gacagcttta aacatttctg ttatttgcaa gcaccagatc ccaattcgta aatgtcaagc 1020 tccttttgaa ttatcaatga tgttttctga tttaaaggag ccttacaaca ttgttcatga 1080 tccttcatat ccccagagga ttgttcatgc tctgcttgaa actcacacat cttttgcaca 1140 agttctttgc aacaacttgc aagaagatgt gatcatctac actttgaaca actatgagct 1200 aactcctgga aagttagatc taggtggaag aaccttaaat tacagtgaag atatctgcaa 1260 aaggaaatat ttcctttcaa aaacacttga atgtctacca tctaacacac aaactatgtc 1320 ttacttggac agcatccaga tcccttcctg gaagatagac tttgccaggg gagaaattaa 1380 aatttctcca caatctgttt cagttgcaaa atctttgtta aagcttgatt taagcgggat 1440 caaaaagaaa gaatctaaga tctcggaagc atatgattca tgatcgaaat aatcttgctg 1500 tgtccagctt tccctaatta tgttatgttt attttctttc tttacttata attatttctc 1560 tattttgtaa tttcttttga atttctcctg tttaatagaa accataaaaa taaaaataaa 1620 aataaaaata aaaatcaaaa tgaaacaaaa atcaaaaaat gaacaaaaat caaacaaaaa 1680 tcaaaaaatg aaataaagac aacaaaaaaa taaaaaacaa aaaaccaaaa aagatcccga 1740 aagggacaat tttggccaaa tttgggtttt gtttttgttt tttgtttttt gttttttgtt 1800 tttattttat ttttattttt atttatttat tttattttat ttttattttt atttttattt 1860 ttattttcat tttatgtttt ttgttgtttt tgttattttg tttattatta agcacaacac 1920 acagaaagca aactttaatt aaacacactt attttaaatt taacacacta agcaagcaca 1980 agcaataaag ataaagaaag ctttatatat ttataggctt tttttataat ttaacttgca 2040 gctgctttta agcaagttct gcaagttttg cctgtttttt aaccccgaac atttcataga 2100 acttgttaag agtttcactg taatgttcca tagcaatact tcctttagca ttaggattgc 2160 tggagctaag tatagcagca tactctttcc ctttcttcac ctgatcttca ttcatttcaa 2220 atgctttgct ttttagcaca gtgcaaactt ttcctagggc ttccctggtg tcatactttt 2280 ttggatcgat cccgaggtct ttgtattttg catcctgata tatagccaag acaacactga 2340 tcatctcaaa gctatcaact gaagcaataa gaggtaagct acctcccagc attatggcaa 2400 gcctcacaga ctttgcatca tcaagaggta atccataggc ttggatcaaa gggtgagaag 2460 caatcttaga tttgatagta ttgagattct cagaattccc ggtttcctcg acaagcctga 2520 ccctgatcaa gctatcaagc cttctgaagg tcatgtcagt ggctccaatc ctgtctgaag 2580 ttttctttat ggtaatttta ccaaaagtaa aatcactttg cttaataacc ttcattatac 2640 tctgacgatt cttcaggaat gtcagacatg aaataatgct catcttcttg atctggtcaa 2700 ggttttccag acaaaaagtc ttgaagttga atgctaccag attctgatct tcctcaaatt 2760 caagatcttt gctttgtgtc aacaaagcaa caatgttttc cttagtgagc ttaaccttag 2820 acatgatgat cgtagaagtt gttatatgct ttgaccgtat gtaattcaag gtgcgaaagt 2880 acaactctgt attccgcagt cgtttcttag ggttttaatg tgatgatttg taagactgag 2940 tgttaaggtt tgaataaaat tgacacaatt gctct 2975 //