ID   KC237109; SV 1; linear; genomic DNA; STD; VRL; 922 BP.
XX
AC   KC237109;
XX
DT   14-MAY-2013 (Rel. 116, Created)
DT   14-MAY-2013 (Rel. 116, Last updated, Version 1)
XX
DE   Tomato leaf deformation virus isolate PE14:2010 C1 (C1) gene, partial cds;
DE   and C4 (C4) gene, complete cds.
XX
KW   .
XX
OS   Tomato leaf deformation virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-922
RX   DOI; 10.1016/j.virusres.2013.02.002.
RX   PUBMED; 23415858.
RA   Sanchez-Campos S., Martinez-Ayala A., Marquez-Martin B.,
RA   Aragon-Caballero L., Navas-Castillo J., Moriones E.;
RT   "Fulfilling Koch's postulates confirms the monopartite nature of tomato
RT   leaf deformation virus: A begomovirus native to the New World";
RL   Virus Res. 173(2):286-293(2013).
XX
RN   [2]
RP   1-922
RA   Sanchez-Campos S., Martinez-Ayala A., Marquez-Martin B.,
RA   Aragon-Caballero L., Navas-Castillo J., Moriones E.;
RT   ;
RL   Submitted (27-NOV-2012) to the INSDC.
RL   Fruticultura Subtropical / Fitopatologia, IHSM La Mayora (IHSM-UMA-CSIC),
RL   Camino de La Mayora, Algarrobo-Costa, Malaga 29750, Spain
XX
DR   MD5; 043dfefb2aa9dc7ad21378e00b040eed.
XX
CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..922
FT                   /organism="Tomato leaf deformation virus"
FT                   /host="Solanum lycopersicum"
FT                   /isolate="PE14:2010"
FT                   /mol_type="genomic DNA"
FT                   /country="Peru:Ica, Santa Cruz"
FT                   /collected_by="E. Moriones"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:681518"
FT   gene            complement(<1..614)
FT                   /gene="C1"
FT   CDS             complement(<1..614)
FT                   /codon_start=1
FT                   /gene="C1"
FT                   /product="C1"
FT                   /note="Rep"
FT                   /db_xref="GOA:R4N1H2"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:R4N1H2"
FT                   /protein_id="AGL34940.1"
FT                   /translation="MPLPKRFKISAKNYFLTYPQCSLTKEEALSQLQNLQTPTNKKYIK
FT                   IARELHEDGQHHLHVLLQFQGKFQCTNNRFFDLVSPTRSAHFHPNVQGAKSSSDVNAYV
FT                   DKDGDTLQWGEFQVDGRSARGGCQTANDAAAEALNAETKEAALQIIREKLPEKYLFQFH
FT                   NLNSNLDKIFTKAPEPWVPPFSLSSFTNVPEEMQEWADDYFG"
FT   gene            complement(200..457)
FT                   /gene="C4"
FT   CDS             complement(200..457)
FT                   /codon_start=1
FT                   /gene="C4"
FT                   /product="C4"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:R4MSV2"
FT                   /protein_id="AGL34941.1"
FT                   /translation="MGNIISTCYSSSKANSSAQITDSSTWYPQPGQHISIRTFRELNPA
FT                   PTSTPTSTKTETLYSGENFRLTEEVLGEVAKQLTTLPQKP"
XX
SQ   Sequence 922 BP; 235 A; 174 C; 213 G; 300 T; 0 other;
     ccaaaataat catcagccca ttcttgcatc tcctccggga cgttagtgaa ggaggagaga        60
     gaaaacggag gaacccaagg ttctggagcc tttgtaaaaa ttttatctaa attagaattt       120
     agattatgaa attgaaataa atacttttca gggagttttt ccctgattat ttgtaaggct       180
     gcctctttgg tttcagcgtt tagggcttct gcggcagcgt cgttagctgt ttggcaacct       240
     cccctagcac ttcttccgtc aacctgaaat tctccccact gtaaagtgtc tccgtctttg       300
     tcgacgtagg cgttgacgtc ggagctggat ttagctccct gaacgttcgg atggaaatgt       360
     gctgacctgg ttggggatac caggtcgaag aatcggttat ttgtgcactg gaatttgcct       420
     tggaactgga gtaacacgtg gagatgatgt tgcccatcct cgtgaagttc ccttgcaatt       480
     ttgatgtatt tcttatttgt gggtgtctgt aggttttgca attgggaaag tgcttcttct       540
     ttggttaaac tgcactgggg atatgtcaag aaataatttt tggcacttat tttaaaacgc       600
     ttgggcagtg gcattttggt aatatatggc ttgtaccccg aatggttttg cttcaaaact       660
     tatatgaatt ggggtaaagg tgtacaatat atagtaggag ttcctaaggg atctagcaac       720
     acgtggcggc catccgttat aatattaccg gatggccgcg cgattttttt accccccttg       780
     ttaagtttgg gaccacatat atacggacaa aatcttttgt ccaatcatgg agcgtctgac       840
     gagcttaatt attaaattcc tttagactga gtggtctata aagacctaga caaactttaa       900
     taattgatat ctttaactca aa                                                922
//