ID   KC237108; SV 1; linear; genomic DNA; STD; VRL; 921 BP.
XX
AC   KC237108;
XX
DT   14-MAY-2013 (Rel. 116, Created)
DT   14-MAY-2013 (Rel. 116, Last updated, Version 1)
XX
DE   Tomato leaf deformation virus isolate PE12:2010 C1 (C1) gene, partial cds;
DE   and C4 (C4) gene, complete cds.
XX
KW   .
XX
OS   Tomato leaf deformation virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-921
RX   DOI; 10.1016/j.virusres.2013.02.002.
RX   PUBMED; 23415858.
RA   Sanchez-Campos S., Martinez-Ayala A., Marquez-Martin B.,
RA   Aragon-Caballero L., Navas-Castillo J., Moriones E.;
RT   "Fulfilling Koch's postulates confirms the monopartite nature of tomato
RT   leaf deformation virus: A begomovirus native to the New World";
RL   Virus Res. 173(2):286-293(2013).
XX
RN   [2]
RP   1-921
RA   Sanchez-Campos S., Martinez-Ayala A., Marquez-Martin B.,
RA   Aragon-Caballero L., Navas-Castillo J., Moriones E.;
RT   ;
RL   Submitted (27-NOV-2012) to the INSDC.
RL   Fruticultura Subtropical / Fitopatologia, IHSM La Mayora (IHSM-UMA-CSIC),
RL   Camino de La Mayora, Algarrobo-Costa, Malaga 29750, Spain
XX
DR   MD5; e1ecc3b9dc968920facb8b9679b5c04a.
XX
CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..921
FT                   /organism="Tomato leaf deformation virus"
FT                   /host="Solanum lycopersicum"
FT                   /isolate="PE12:2010"
FT                   /mol_type="genomic DNA"
FT                   /country="Peru:Ica, Santa Cruz"
FT                   /collected_by="E. Moriones"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:681518"
FT   gene            complement(<1..614)
FT                   /gene="C1"
FT   CDS             complement(<1..614)
FT                   /codon_start=1
FT                   /gene="C1"
FT                   /product="C1"
FT                   /note="Rep"
FT                   /db_xref="GOA:R4N3A6"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:R4N3A6"
FT                   /protein_id="AGL34938.1"
FT                   /translation="MPPPKRFQISAKNYFLTYPHCSLTKEEALSQFQNLNTPINKKYIK
FT                   ICRELHENGEHHLHVLIQFEGKYNCKNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI
FT                   DKDGDTLEWGEFQIDGRSARGGCQTANDSYAKALNAGDLHAALAVLKEEQPKDYVLQHH
FT                   NLRANLEKIFSKAPEPWSPPFPLSSFTNVPEEMQEWADDYFG"
FT   gene            complement(200..457)
FT                   /gene="C4"
FT   CDS             complement(200..457)
FT                   /codon_start=1
FT                   /gene="C4"
FT                   /product="C4"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:R4N543"
FT                   /protein_id="AGL34939.1"
FT                   /translation="MGNIISTCLSSSKGNTTARINDSSTWYPLPGQHISIRTYRELNPA
FT                   PTSSPILTRTVTPLNGESSKSTAEVLEVAAKLLTTVTPKR"
XX
SQ   Sequence 921 BP; 227 A; 186 C; 216 G; 292 T; 0 other;
     ccaaaataat catcagccca ttcttgcatc tcctccggga cgttagtgaa ggaggagagt        60
     ggaaacggag gagaccatgg ctccggagcc tttgagaaaa tcttctctag gttcgctctt       120
     agattatggt gctgcaacac ataatctttg ggttgttctt cctttaagac ggcaagtgct       180
     gcatgtaaat cgccagcgtt taacgctttg gcgtaactgt cgttagcagt ttggcagcca       240
     cctctagcac ttctgccgtc gatttggaac tctccccatt caagggtgtc accgtccttg       300
     tcaatatagg acttgacgtc ggagctggat ttagctccct gtatgttcgg atggaaatgt       360
     gctgacctgg taggggatac caggtcgaag aatcgttgat tcttgcagtt gtatttccct       420
     tcgaactgga taagcacgtg gagatgatgt tccccatttt cgtgcagttc tctgcaaatt       480
     ttgatgtatt tcttgttaat tggggtgttt aggttttgga attgggaaag tgcttcttcc       540
     tttgttaacg agcagtgagg atatgtaagg aaataatttt tggcagatat ttgaaagcgt       600
     ttaggcgggg gcattttggt aattgttgga ttggttacca attgaggtct ctcaaaaact       660
     ctatatgaat tggtagaacg gtaaccaatt tatactagaa ccctctttgc taaaatctcc       720
     acgtggcggc catccgttat aatattaccg gatggccgcg cgattttttt accccccttg       780
     ttaagtttgg gaccacacat atacggacaa aaccttttgt ccaatcatgg agcgtctgac       840
     gagcttaatt attaattcct ttagactgag tggtctataa agaccccgac aatctgtaat       900
     aattgatatc tttaactcaa a                                                 921
//