ID   KC237105; SV 1; linear; genomic DNA; STD; VRL; 921 BP.
XX
AC   KC237105;
XX
DT   14-MAY-2013 (Rel. 116, Created)
DT   14-MAY-2013 (Rel. 116, Last updated, Version 1)
XX
DE   Tomato leaf deformation virus isolate PE5:2010 C1 (C1) gene, partial cds;
DE   and C4 (C4) gene, complete cds.
XX
KW   .
XX
OS   Tomato leaf deformation virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-921
RX   DOI; 10.1016/j.virusres.2013.02.002.
RX   PUBMED; 23415858.
RA   Sanchez-Campos S., Martinez-Ayala A., Marquez-Martin B.,
RA   Aragon-Caballero L., Navas-Castillo J., Moriones E.;
RT   "Fulfilling Koch's postulates confirms the monopartite nature of tomato
RT   leaf deformation virus: A begomovirus native to the New World";
RL   Virus Res. 173(2):286-293(2013).
XX
RN   [2]
RP   1-921
RA   Sanchez-Campos S., Martinez-Ayala A., Marquez-Martin B.,
RA   Aragon-Caballero L., Navas-Castillo J., Moriones E.;
RT   ;
RL   Submitted (27-NOV-2012) to the INSDC.
RL   Fruticultura Subtropical / Fitopatologia, IHSM La Mayora (IHSM-UMA-CSIC),
RL   Camino de La Mayora, Algarrobo-Costa, Malaga 29750, Spain
XX
DR   MD5; 759bac6a74047283935dadd27feeea63.
XX
CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..921
FT                   /organism="Tomato leaf deformation virus"
FT                   /host="Solanum lycopersicum"
FT                   /isolate="PE5:2010"
FT                   /mol_type="genomic DNA"
FT                   /country="Peru:Ica, Santa Cruz"
FT                   /collected_by="E. Moriones"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:681518"
FT   gene            complement(<1..614)
FT                   /gene="C1"
FT   CDS             complement(<1..614)
FT                   /codon_start=1
FT                   /gene="C1"
FT                   /product="C1"
FT                   /note="Rep"
FT                   /db_xref="GOA:R4MUR0"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:R4MUR0"
FT                   /protein_id="AGL34932.1"
FT                   /translation="MPLPKRFKISAKNYFLTYPQCNLTKEEALSQLQNLQTPTNKKYIK
FT                   IARELHEDGQHHLHVLLQFQGKFQCTNNRFFDLVSPTRSTHFHPNIQGAKSSSDVNSYV
FT                   DKDGDTLQWGEFQVDGRSARGGCQTANDAAAEALNAETKEAALQIIREKLPEKYLFQFH
FT                   NLNSNLDKIFTKAPEPWSPPFPLSSFTNVPEEMQEWADDYFG"
FT   gene            complement(200..457)
FT                   /gene="C4"
FT   CDS             complement(200..457)
FT                   /codon_start=1
FT                   /gene="C4"
FT                   /product="C4"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:R4N1G7"
FT                   /protein_id="AGL34933.1"
FT                   /translation="MGNIISTCYSSSKGNSSARITDSSTWYPQPGQHISIRTFRELNPA
FT                   PTSTPTSTRTEILYSGENSRLTDEVLGEVAKQLTTLPQKP"
XX
SQ   Sequence 921 BP; 233 A; 175 C; 217 G; 296 T; 0 other;
     ccaaaataat catcagccca ttcttgcatc tcctccggga cgttagtgaa ggaggagagt        60
     ggaaacggag gagaccatgg ctccggagcc tttgtaaaaa ttttatctaa attagaattt       120
     agattatgaa attgaaataa atatttttca gggagttttt ccctgataat ttgtaaggct       180
     gcctctttgg tttcagcgtt tagggcttct gcggcagcgt cgttagctgt ttggcaacct       240
     cccctagcac ttcgtccgtc aacctggaat tctccccact gtaaagtatc tccgtccttg       300
     tcgacgtagg agttgacgtc ggagctggat ttagctccct gaatgttcgg atggaaatgt       360
     gttgacctgg ttggggatac caggtcgaag aatcggttat tcgtgcactg gaatttccct       420
     tggaactgga gtagcacgtg gagatgatgt tgcccatcct cgtgaagttc cctggcaatt       480
     ttgatgtatt tcttatttgt gggtgtttgt aggttttgca attgggaaag tgcttcttct       540
     ttggttaaat tgcactgggg atatgtcaag aaataatttt ttgcacttat tttaaaacgc       600
     ttaggcagtg gcatttttgt aataaatggc ttgtaccccg aatggtttgg cttcaaaact       660
     tatatgaatt ggggtaaagg ggtacaatat atagtaggag ttcctaaggg atctagcaac       720
     acgtggcggc catccgttat aatattaccg gatggccgcg cgattttttt accccccttg       780
     ttaagtttgg gaccacacat atacggacaa aaccttttgt ccaatcatgg agcgtctgac       840
     gagcttaatt attaattcct ttagactgag tggtctataa agacccagac aatctgtaat       900
     aattgatatc tttaactcaa a                                                 921
//