ID   KC197055; SV 1; linear; genomic RNA; STD; VRL; 969 BP.
XX
AC   KC197055;
XX
DT   03-MAR-2013 (Rel. 116, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 4)
XX
DE   Rice stripe virus isolate V12 nucleocapsid protein gene, complete cds.
XX
KW   .
XX
OS   Tenuivirus oryzaclavatae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus.
XX
RN   [1]
RP   1-969
RA   Ren C.M., Cheng Z.B., Miao Q., Fan Y.J., Zhou Y.J.;
RT   "First report of rice stripe virus in Vietnam";
RL   Plant Dis. 97(8):1123(2013).
XX
RN   [2]
RP   1-969
RA   Ren C.M., Cheng Z.B., Miao Q., Fan Y.J., Zhou Y.J.;
RT   ;
RL   Submitted (22-NOV-2012) to the INSDC.
RL   Jiangsu Academy of Agricultural Sciences, Institute of Plant Protection,
RL   Zhonglingjie Street 50, Nanjing, Jiangsu 210014, China
XX
DR   MD5; cc94245c9867a6c37dfbde11f2650354.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..969
FT                   /organism="Tenuivirus oryzaclavatae"
FT                   /segment="RNA3"
FT                   /host="rice"
FT                   /isolate="V12"
FT                   /mol_type="genomic RNA"
FT                   /country="Viet Nam"
FT                   /collection_date="Jun-2012"
FT                   /db_xref="taxon:3052763"
FT   CDS             complement(1..969)
FT                   /codon_start=1
FT                   /product="nucleocapsid protein"
FT                   /note="CP"
FT                   /db_xref="GOA:M1RFC8"
FT                   /db_xref="InterPro:IPR008864"
FT                   /db_xref="InterPro:IPR009522"
FT                   /db_xref="UniProtKB/TrEMBL:M1RFC8"
FT                   /protein_id="AGG18261.1"
FT                   /translation="MGTNKPATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG
FT                   YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR
FT                   YGIVSSVGTNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV
FT                   PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT
FT                   TGLLVITCKSKNLADKKKEDGRKKVLDEFITNGKVKITIFDALAGMSVNTISTYGNQTR
FT                   LYLAQQSKLMKILAENTSKTASEVSGLVKEFFEDEAEGADD"
XX
SQ   Sequence 969 BP; 230 A; 251 C; 195 G; 293 T; 0 other;
     ctagtcatct gcaccttctg cctcgtcctc gaagaactcc ttcaccaacc cgctgacttc        60
     tgatgctgtc tttgaagtgt tctcagcaag gatcttcatc agtttgctct gttgagccaa       120
     gtacagcctt gtctgattcc cataagtgct gatcgtattg acagacatac cagccagcgc       180
     atcgaagatt gtgatcttca ctttcccatt ggtgatgaat tcatctaaga ccttctttct       240
     gccatcttcc ttcttcttgt cagccaggtt ctttgacttg catgtgatga ccaggagacc       300
     agttgtgtac ttcatcatgt ctatgtcttt tgtcagacca cgctccttct tcttaccctc       360
     tggcatggtc tttttggtta tttggaagga gtgaatgatg tgcacaacaa acaaaatgtg       420
     acttagggag tgagttgtgc agtaaggagc tgtttcactc tccagtttga tatattgtgg       480
     aacatagtcc caaagtaagt tatcacatcc tgttagtccc aggtcagagg agtccacagc       540
     catcttaaca ccagaaattt gtctcacaac ttcatgtgag acatttggga atagctgagc       600
     cagccttcca agtgtgatag cattggcatt tgtccccacc gaggacacta tcccatacct       660
     cgacaccaag gttgaagcct ctgtgcttcc agccgccact ttcactttct tagtgacatc       720
     tctcacaaag ccagtgcctc tcacatatct catggtgatg cacatagtca tatccttggc       780
     cagtgtgtca ccacctttgt ccttcaatat gccaatcaga gttgcagcat catagcctgc       840
     atactctatc tgaccagcaa aggtcacaac atcagcctta tgagcagtca ggtaagacaa       900
     cgcatctttg gagatgtcat tgattgcctt ctgcaaatca gctagagtgg ctggcttgtt       960
     ggtacccat                                                               969
//