ID KC189894; SV 1; circular; genomic DNA; STD; VRL; 2742 BP. XX AC KC189894; XX DT 20-FEB-2013 (Rel. 115, Created) DT 20-FEB-2013 (Rel. 115, Last updated, Version 1) XX DE Tomato yellow leaf curl China virus isolate SC327, complete genome. XX KW . XX OS Tomato yellow leaf curl China virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2742 RA Yu Y., Ruan T., Bao L., Xiong Y., Zhang J., Qing L.; RT "The detection and identification of begomovirus isolated from Malvastrum RT coromandelianum in Panzhihua, Sichuan Province"; RL Unpublished. XX RN [2] RP 1-2742 RA Yu Y., Ruan T., Bao L., Xiong Y., Zhang J., Qing L.; RT ; RL Submitted (15-NOV-2012) to the INSDC. RL College of Plant Protection, Southwest University, Tiansheng Road, No. 2, RL Beibei District, Chongqing, Chongqing 400716, China XX DR MD5; 8ecdcc5055b32e9d5f15d901620abcc0. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2742 FT /organism="Tomato yellow leaf curl China virus" FT /host="Malvastrum coromandelianum" FT /isolate="SC327" FT /mol_type="genomic DNA" FT /country="China:Hongge Town, Panzhihua City" FT /collection_date="11-Dec-2010" FT /db_xref="taxon:185793" FT CDS 130..477 FT /codon_start=1 FT /product="AV2 protein" FT /db_xref="GOA:M1LQ84" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:M1LQ84" FT /protein_id="AGF39232.1" FT /translation="MWDPLLNEFPDTVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDL FT ILVIRARDYVEASRRYSHFHSRLQGASPSELRQPLHTSCCCPHCPRHQKTNMEQQAHVS FT KAHDVPDVQKP" FT CDS 290..1060 FT /codon_start=1 FT /product="AV1 protein" FT /db_xref="GOA:M1LG19" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:M1LG19" FT /protein_id="AGF39231.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYTRRAAVPTVRVTRRQIWN FT NRPMYRKPMMYRMYRSPDVPKGCEGPCKVQSYEARHDVSHTGKVICVTDVTRGNGITHR FT VGKRFCVKSIYVIGKIWMDENIKLKNHTNTVMFFLVRDRRPSGTPMDFQQVFNCYDNEP FT STGTVKNDLRDRFQVIRKFNYMVTGGQYASKEQAVVKKFMRVNTHVVYNHQEQAKYENH FT TENALLLYMVCTHASNPVYATLKVRIYFYDSQMN" FT CDS complement(1057..1461) FT /codon_start=1 FT /product="AC3 protein" FT /db_xref="GOA:M1KNF5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:M1KNF5" FT /protein_id="AGF39235.1" FT /translation="MDSRTGELLTVAQAENGVYIWTVKNPLYFKITKHLERPFLRNHDI FT ITLQVQFNYNLRKALGIHKCFLTCKIWTRLHPQTLRFLRVFKYQCIKYLDRLGVISINN FT VIRAISHVLYNVIEGTIDVIEDHDIKLNIY" FT CDS complement(1202..1606) FT /codon_start=1 FT /product="AC2 protein" FT /db_xref="GOA:M1L943" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:M1L943" FT /protein_id="AGF39234.1" FT /translation="MRSSSPSKAHSTQVPIKVQHRIAKKTTRRRRVDLPCGCSYFLAIG FT CHDNGFTHRGTTHCSSSREWRLYLDGQKSPLFQDNQTPRATISEEPRHNHITSPIQLQP FT EESVGDTQMFSNLQNLDSFTSSDIAFLKSI" FT CDS complement(1509..2594) FT /codon_start=1 FT /product="AC1 protein" FT /db_xref="GOA:M1LDR1" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:M1LDR1" FT /protein_id="AGF39233.1" FT /translation="MPRLNSFQVKAKNIFLTYPKCPIPKEQALEIIQQIPCPSDKLFIR FT VAQEKHRNGSLHLHVLIQFKGKAQFRNPRHFDITHPNTSTQYHPNFQGAKSSSDVKSYI FT KKDGDYIDWGSFQIDGRSARGGQQTANDAAAEALNTGSAEAAMAVIREKLPKDYIFQYH FT NLKSNLDRIFAPPLEVYISPFASSSFDQVPEELEDWAVDNVVSAAARPLRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWFNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLEEEKNTALRNWALKNAIFVTLQGPL FT YSGSYQGATPNRQEDNQTTES" FT CDS complement(2180..2437) FT /codon_start=1 FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:G1ED50" FT /protein_id="AGF39236.1" FT /translation="MGHCISMCSSNSKVKPSSVIPDISTSHTLIPPPNTTQTSRELSPA FT RTSSPTSRRTVITSTGVVFRSMEDLHEEVNRQLMMLLQRP" XX SQ Sequence 2742 BP; 727 A; 548 C; 621 G; 846 T; 0 other; accggatggc cgcgcgattt tttttaaagt ggtccccgca ttcgcgtatg tccaatcatg 60 gccgctcctc aaagcttaat tattaaatgg tcccctatat aacttaggcc ctaagtattt 120 acgttaaaca tgtgggatcc tttactcaac gagttcccgg atactgtaca cgggttcagg 180 tgtatgcttg caataaaata cctgcagctt gtagaaaata cgtattctcc cgatacgttg 240 ggatacgatc taatacgcga tctcatactt gttatacgtg cgagggatta tgtcgaagcg 300 tcccgccgat atagtcattt ccactcccgc ctccaaggtg cgtcgccgtc tgaacttcga 360 cagcccctac acacgtcgtg ctgctgtccc cactgtccgc gtcaccagaa gacaaatatg 420 gaacaacagg cccatgtatc gaaagcccat gatgtaccgg atgtacagaa gccctgatgt 480 tccgaagggt tgtgaaggcc catgtaaggt gcagtcatat gaggcccgtc atgatgtatc 540 tcatactggt aaggtgatat gtgtcacgga tgttacacgt ggtaatggta ttacgcatcg 600 agttggtaag aggttttgtg tgaaatctat ttacgtcatt gggaagatat ggatggatga 660 aaatattaaa ttgaagaatc acaccaatac agttatgttt ttccttgtta gagatcggcg 720 tccgagtggt actccgatgg attttcaaca ggtgtttaat tgttatgaca atgagccaag 780 caccggtact gtgaagaatg atcttagaga taggtttcaa gtgattcgca agttcaatta 840 tatggttact ggtgggcaat atgcctccaa agaacaagca gtggtgaaga agttcatgcg 900 ggttaatacc catgttgtgt ataatcatca agaacaggcg aagtatgaaa atcatactga 960 gaatgcgttg ttgttgtata tggtgtgtac tcatgctagt aatcctgtat atgcgacttt 1020 gaaagtccgt atctattttt atgattctca aatgaattaa taaatattta gttttatatc 1080 atgatcttca attacatcaa ttgtgccttc tatgacattg tataatacat gagatattgc 1140 tctaattaca ttgttgatgc taatcactcc caatctatct aaatatttaa tacattgata 1200 cttaaatact cttaagaaac gcaatgtctg aggatgtaaa cgagtccaga ttttgcaggt 1260 tagaaaacat ttgtgtatcc ccaacgcttt cctcaggttg tagttgaatt ggacttgtaa 1320 tgtgattatg tcgtggttcc tcagaaatgg tcgctctagg tgtttggtta tcttgaaata 1380 aaggggattt ttgaccgtcc aaatataaac gccattctct gcttgagcta cagtgagtag 1440 ttcccctgtg cgtgaatcca ttatcgtgac agccaatggc gagaaagtat gaacagccac 1500 agggtagatc aactctccgt cgtctggttg tcttcttggc gattcggtgt tgcaccttga 1560 taggaacctg agtagagtgg gccttggagg gtgacgaaga tcgcattttt tagcgcccaa 1620 tttcgaagtg cggtgttctt ttcctcttcc agatactctt tatagctgga attgggtcct 1680 ggattgcaga ggaagatagt gggtattccg cctttaattt gaactggttt cccgtatttg 1740 gtgttgcttt gccagtccct ttgggctccc atgaattcct taaagtgctt taggtagtgc 1800 ggatctacgt catcaatgac gttgaaccaa gcatcattat tgtacacctt tggactcaga 1860 tccaaatgac cacacaaata attatgtggt cctaatgacc tggcccacat cgtcttcccc 1920 gttctactat caccctctat gactatactt atcggtctta aaggccgcgc agcggcactg 1980 acaacattat ccaccgccca atcttcaagt tcttctggaa cttgatcaaa agaagaagaa 2040 gcaaatggag aaatatatac ctccaacgga ggtgcaaaaa tcctatctaa attagatttt 2100 aaattatgat attgaaaaat ataatctttc gggagtttct cccgaataac agccatagcg 2160 gcttcagcgg aacctgtgtt tagggcctct gcagcagcat cattagctgt ctgttgacct 2220 cctcgtgcag atcttccatc gatctgaaaa ctaccccagt cgatgtaatc accgtccttc 2280 ttgatgtagg acttgacgtc cgagctggac ttagctccct ggaagtttgg gtggtattgg 2340 gtggaggtat tagggtgtgt gatgtcgaaa tgtctgggat tacggaactg ggctttacct 2400 ttgaattgga tgagcacatg gagatgcagt gacccatttc gatgtttttc ttgtgctact 2460 cgtatgaata atttatcgga tgggcatggt atttgttgaa tgatttctag ggcttgttct 2520 tttggaatgg ggcatttggg ataagtgaga aatatgtttt tggctttcac ttggaatgaa 2580 ttaagacgag gcattttgac ttagtcaatt gggtgctctc taaagtccta tggaatgggg 2640 ggctttgggt gcccatttat accgagcacc caaatggcaa tatcgtaatt ccccaaataa 2700 attcaaaatt cgaaatccaa aagcggccat ccgtataata tt 2742 //