ID KC189893; SV 1; circular; genomic DNA; STD; VRL; 2737 BP. XX AC KC189893; XX DT 20-FEB-2013 (Rel. 115, Created) DT 20-FEB-2013 (Rel. 115, Last updated, Version 1) XX DE Tomato yellow leaf curl China virus isolate SC44, complete genome. XX KW . XX OS Tomato yellow leaf curl China virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2737 RA Yu Y., Ruan T., Xiong Y., Zhang J., Qing L.; RT "The detection and identification of begomovirus isolated from Malvastrum RT coromandelianum in Panzhihua, Sichuan Province"; RL Unpublished. XX RN [2] RP 1-2737 RA Yu Y., Ruan T., Xiong Y., Zhang J., Qing L.; RT ; RL Submitted (15-NOV-2012) to the INSDC. RL College of Plant Protection, Southwest University, Tiansheng Road, No. 2, RL Beibei District, Chongqing, Chongqing 400716, China XX DR MD5; b824e9f65c2dba3415f95d379b43a518. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2737 FT /organism="Tomato yellow leaf curl China virus" FT /host="Malvastrum coromandelianum" FT /isolate="SC44" FT /mol_type="genomic DNA" FT /country="China:Renhe District, Panzhihua City" FT /collection_date="12-Aug-2009" FT /db_xref="taxon:185793" FT CDS 128..475 FT /codon_start=1 FT /product="AV2 protein" FT /db_xref="GOA:M1LG14" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:M1LG14" FT /protein_id="AGF39226.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVEKTYSPDTLGYDLIRDL FT ILVIRARDYVEASRRYSHFHSRLEGASPAELRQPLHGSCCCPHCPRHQKTNVVQQAHVS FT KAHDVPDVQKP" FT CDS 288..1058 FT /codon_start=1 FT /product="AV1 protein" FT /db_xref="GOA:M1KNE9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:M1KNE9" FT /protein_id="AGF39225.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYTGRAAAPTVRVTRRQMWY FT NRPMYRKPMMYRMYRSPDVPKGCEGPCKVQSYEARHDIAHTGKVICVTDVTRGNGITHR FT VGKRFCVKSIYVIGKIWMDENIKVKNHTNTVMFFLVRDRRPSGTPMDFQQVFNCYDNEP FT STATVKNDLRDRFQVRRKFYSTVTGGQYACKEQALVKKFIRVNNHVVYNHQEQAKYENH FT TENALLLYMVTTHASNPVYATLKVRIYFYDSQLN" FT CDS complement(1055..1459) FT /codon_start=1 FT /product="AC3 protein" FT /db_xref="GOA:D8MIE2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D8MIE2" FT /protein_id="AGF39229.1" FT /translation="MDSRTGELLTAAHSENGVYIWTVKNPLYFKITKHQKRPFLRNHDV FT ITLQIQFNYNLRKALGIHKCFLACKIWTHLHPQTLRFLRVFKYQCLKYLDSLGVISINN FT VIRAISHVLYNVLEGTIDVIEDHDIKFNIY" FT CDS complement(1200..1604) FT /codon_start=1 FT /product="AC2 protein" FT /db_xref="GOA:D8MIE3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D8MIE3" FT /protein_id="AGF39228.1" FT /translation="MRSSSPSNSHSTQVPIKVKHRIAKKTTRRRRVDLPCGCSYFIAIG FT CRDNGFTHRGTTHCSSFREWRLYLDGQKSPIFQDNQTPKETVPEEPRRNNITNPIQLQP FT EESVGDTQMFSSLQNLDSFTSSDLAFLKSI" FT CDS complement(1507..2592) FT /codon_start=1 FT /product="AC1 protein" FT /db_xref="GOA:M1LQ81" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:M1LQ81" FT /protein_id="AGF39227.1" FT /translation="MPPPNKFRINAKNYFLTYPHCSLTKEEALSQIKALETPITKLFIR FT ICRELHEDGTPHLHILIQFEGKFQCKNQRFFDLISPNRSAHFHPNIQGAKSSTDVKSYM FT EKNGDVLDHGIFQIDGRSARGGCQSANDAYAEAINSGSKASALNILREKAPKDFVLQFH FT NLNSNLDRIFTPPIDEYISPFSYSSFDQVPHELDEWAVNNVVSAAARPLRPISIVIEGD FT SRTGKTMWARSLGQHNYLCGHLDLSPKVYNNNAWYNIIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLDEEKNSALKNWAVKNAIFVTLQQPL FT YSGTYQGETPNRQKNNQTTSG" FT CDS complement(2142..2435) FT /codon_start=1 FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:M1KNF2" FT /protein_id="AGF39230.1" FT /translation="MGLLTCISSSNSKGNSSVKINDSSISYPQTGQHISIRTFRELKAQ FT QMLNHTWKKTETCLIMEFSRSMEDRLEEVANLPTTHMPRQSIQGPKLRPSIY" XX SQ Sequence 2737 BP; 737 A; 528 C; 594 G; 878 T; 0 other; accggatggc cgcgattttt tttaaagtgg tccccgcaga cacgtgtgtc caatcttggc 60 cactcctcaa agcttaattg ttaaatggtc ccctataaaa cttagcgccc aagtattcac 120 gttaaacatg tgggatccat tgcttaatga gtttcctgaa accgtgcacg gttttaggtg 180 catgttagca attaagtatt tgcagttagt tgaaaaaaca tactctcctg atacattagg 240 ttacgattta attcgtgact taattttagt cattcgtgct agagattatg tcgaagcgtc 300 ccgcagatat agtcatttcc actcccgcct cgaaggtgcg tcgccggctg aacttcgaca 360 gcccctacac gggtcgtgct gctgccccca ctgtccgcgt caccagaaga caaatgtggt 420 acaacaggcc catgtatcga aagcccatga tgtaccggat gtacagaagc cctgacgtcc 480 caaagggttg tgaaggccca tgtaaagtcc aatcctatga ggctcgtcat gatattgcac 540 atactggtaa agttatctgt gtaacggatg ttacccgtgg taatggaatt actcatcgtg 600 ttggtaagag gttttgtgtt aaatccattt acgtcattgg gaagatatgg atggacgaga 660 atattaaagt gaagaaccat acaaacaccg taatgttttt tcttgttaga gatcgtcgtc 720 ctagtggtac acctatggat ttccaacaag tctttaattg ctatgacaat gaaccaagca 780 ctgctactgt taaaaacgat ttaagggatc gttttcaagt tcgtcgtaaa ttctattcta 840 cggttactgg cggacaatat gcttgtaagg agcaggcgtt ggtgaagaag ttcattcgtg 900 ttaacaatca tgttgtttac aatcatcaag aacaggcgaa gtatgagaat catacagaga 960 atgctttatt gttgtacatg gttactaccc atgcaagtaa tcctgtatat gcgactttga 1020 aagttcgcat ttatttttat gattctcagt tgaattaata aatattaaat tttatatcat 1080 gatcttcaat tacatcaatt gtgccttcta gtacattgta taatacatga gatattgccc 1140 taattacatt gttgatgcta atcacgccta aactatctaa atatttaaga cattgatatt 1200 taaatactct taagaaacgc aaggtctgag gatgtaaatg agtccagatt ttgcaggcta 1260 gaaaacattt gtgtatcccc aacgctttcc tcaggttgta gttgaattgg atttgtaatg 1320 ttattacgtc gtggttcctc aggaacggtc tcttttggtg tttggttatc ttgaaatata 1380 ggggattttt gaccgtccag atataaacgc cattctctga atgagctgca gtgagtagtt 1440 ccccggtgcg tgaatccatt atcgcgacac cctatagcga tgaagtatga gcatccacaa 1500 ggtaggtcaa cccgacgtcg tctggttgtt tttttggcga ttcggtgttt caccttgata 1560 ggtacctgag tagagtggct gttggagggt gacgaagatc gcattcttta ccgcccagtt 1620 tttaagtgcg gagttctttt cctcatctag gtactcttta tagctggaat tgggtcctgg 1680 attgcagagg aagattgtgg gtatgccgcc tttaatttga actggtttac cgtattttgt 1740 gttgctttgc cagtcccttt gggcccccat gaattcttta aagtgcttta gataatgcgg 1800 atcaacgtca tcaatgatgt tgtaccaggc attattattg tacacctttg gactcagatc 1860 tagatgacca cacaaataat tatgttggcc taacgatctg gcccacatcg tcttccccgt 1920 cctgctatca ccctctatga ctatacttat tggtcttaat ggccgcgcag cggcactaac 1980 aacattattt acagcccatt catcaagttc atgtggtact tggtcaaaag aagaataaga 2040 aaatggagaa atatattcgt caattggagg agtaaaaatc ctatctaaat tactatttaa 2100 attatgaaat tgtaaaacaa aatctttagg ggccttttcc ctcaatatat tgagggccga 2160 agctttggac cctgaattga ttgcctcggc atatgcgtcg ttggcagatt ggcaacctcc 2220 tctagccgat cttccatcga tctggaaaat tccatgatca agcacgtctc cgtttttttc 2280 catgtatgat ttaacatctg ttgagctttt agctccctga atgttcggat ggaaatgtgc 2340 tgacctgttt ggggatatga gatcgaagaa tcgttgattt ttacactgga atttcccttc 2400 gaattggatg aggatatgca ggtgaggagt cccatcttcg tgcagttccc tgcagattct 2460 gatgaataat ttagtaattg gggtttctag ggctttaatt tgggaaagtg cctcctcttt 2520 cgtaagagaa cagtgtgggt atgtgaggaa atagtttttg gcatttattc tgaatttatt 2580 aggaggaggc attgactggt caattggtgt ctctcaaact tggctatgca atcggtgtct 2640 ggggtcttat ttatatgtgg acaccaaatg gcataattgt aaattatgaa gataatttca 2700 aaattcaaaa tccaaaagcg gccatccgta taatatt 2737 //