ID KC176780; SV 1; circular; genomic DNA; STD; VRL; 2574 BP. XX AC KC176780; XX DT 28-DEC-2012 (Rel. 115, Created) DT 17-JUN-2020 (Rel. 144, Last updated, Version 2) XX DE Tomato yellow mottle virus isolate Grecia segment DNA-A, complete sequence. XX KW . XX OS Tomato yellow mottle virus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; OC Geplafuvirales; Geminiviridae; Begomovirus. XX RN [1] RP 1-2574 RA Maliano M.R., Melgarejo T., Rojas M., Barboza N., Gilbertson R.L.; RT "Tomato Yellow Mottle Virus, a new begomovirus in Costa Rica"; RL Unpublished. XX RN [2] RP 1-2574 RA Maliano M.R., Melgarejo T., Rojas M., Barboza N., Gilbertson R.L.; RT ; RL Submitted (13-NOV-2012) to the INSDC. RL Plant Pathology, UC Davis, One Shields Avenue, 354 Hutchison Hall, Davis, RL CA 95616, USA XX DR MD5; 3a75602d3039a4fc56b0edde91568077. XX CC GenBank Accession Numbers KC176780-KC176781 represent the complete CC genome of Tomato yellow mottle virus. XX FH Key Location/Qualifiers FH FT source 1..2574 FT /organism="Tomato yellow mottle virus" FT /segment="DNA-A" FT /host="Solanum lycopersicum" FT /isolate="Grecia" FT /mol_type="genomic DNA" FT /country="Costa Rica" FT /collection_date="1990" FT /clone="27" FT /db_xref="taxon:86502" FT gene 169..915 FT /gene="AV1" FT CDS 169..915 FT /codon_start=1 FT /gene="AV1" FT /product="capsid protein" FT /db_xref="GOA:L0G7K4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:L0G7K4" FT /protein_id="AGA80991.1" FT /translation="MPKRDAPWRLSAGTTKVSRSSNYSPNGGMGPKATSWVNRPMYRKP FT RIYRTLRGPDVPKGCEGPCKVQSYEQRHDVSHVGKVMCISDITRGGGITHRVGKRFCVK FT SVYILGKVWMDDNIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATVKND FT LRDRFQVLHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENALLLY FT MACTHASNPVYATLKIRIYFYDSITN" FT gene complement(912..1310) FT /gene="AC3" FT CDS complement(912..1310) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:L0G449" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:L0G449" FT /protein_id="AGA80994.1" FT /translation="MDSRTGESITAHQAENSVFIWDVPNPLYFRMCRVEEPLYTSTRIY FT HIQIRCNHNLRRALNLHKAFLNFQVWTTSIRASGKTYLNRFKYLVLLYLDRIGVIGINN FT VIRAVRFATDKAYVNHVLENHEIKVNLY" FT gene complement(1057..1446) FT /gene="AC2" FT CDS complement(1057..1446) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:L0G6S4" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:L0G6S4" FT /protein_id="AGA80993.1" FT /translation="MLNSSSSTPPSIKPHHRNAKRRAIRRKRIDLNCGCSIFLHINCSN FT NGFTHRGEHHCASGREFRFYLGCSKSPLFQDVSSRRATLHIDQNLPHSNQVQPQPQEGT FT ESSQSFSELPSLDDINSSFWEDLLK" FT gene complement(1388..2443) FT /gene="AC1" FT CDS complement(1388..2443) FT /codon_start=1 FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:L0G632" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:L0G632" FT /protein_id="AGA80992.1" FT /translation="MPPPKKFRLSAKNIFLTYPRCSLTKEEALFQLQNISLPSNKLFIR FT VARELHEDGEPHLHVLIQLEGKVQIYNQKLFDLSSTSRSAYFHPNIQGAKSSSDVKSYM FT EKDGEFLDFGVFQIDGRSSRGGIQTTNDSYAKALNAGSAESALQILKEEQPAHYFLHYH FT NLVNNANRIFQKAPEPWVPPFQLSSFNAVPDEMQEWADDYFGRGAAARPERPISIIVEG FT DSRTGKTMWARSLGPHNYLSGHLDFNSRVYSNEVEYNVIDDVAPHYLKLKHWKELIGAQ FT KDWQSNCKYGKPVQIKGGIPSIVLCNPGDGGSYKDFLDKEENASLKQWTLKNAKFIFLN FT SPLYQTSSQER" FT gene complement(2029..2286) FT /gene="AC4" FT CDS complement(2029..2286) FT /codon_start=1 FT /gene="AC4" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:L0G822" FT /protein_id="AGA80995.1" FT /translation="MGNLISMCLYNSRVKSKYTTRNSSTSVPQADQHISIRTFRELRAA FT QTLNHTWRKTENSLILEFSRSMEDQVEEVYRQPMIHMQKR" XX SQ Sequence 2574 BP; 692 A; 544 C; 566 G; 772 T; 0 other; accggatggc cgcgtgcccc gacccgcttc cgtaaagtgc gctgggacca caactaaaaa 60 cacgacgtcc aatcacatca cgtctgacga gtctagatat taagacttgc tgactaagtt 120 gtgggcctat aaaacaataa ttggttccat tttgatcttt aattcaaaat gcctaagcgg 180 gatgcccctt ggcgtttaag cgcggggacc actaaggtct cccgctctag taattattct 240 ccaaatggag gtatgggccc taaggccact tcttgggtta acaggcccat gtacaggaag 300 cccaggatct atcgcacgtt gagaggccct gatgtgccca aaggctgcga aggtccctgt 360 aaggtccagt cctacgagca gcgtcatgac gtctctcatg ttggtaaagt catgtgcatc 420 tcagacatca cacgaggtgg tggtattacc caccgtgtag gtaaacgttt ttgcgttaag 480 tctgtttaca ttttagggaa ggtatggatg gacgataaca tcaagttgaa gaaccacacg 540 aatagtgtta tgttctggct ggttagagac cggagaccct atggcacccc tatggatttt 600 ggtcaagtgt tcaacatgta cgacaatgag cccagtacag ccactgttaa gaacgatctt 660 cgtgatcgtt ttcaagtgct acacaagttc tacgccaagg tcacgggtgg acagtatgcc 720 agcaatgagc aggcgttggt caagcgtttc tggaaggtta acaaccatgt cgtctataac 780 catcaagaag cagggaaata cgagaatcac actgagaatg ctttgttatt gtacatggca 840 tgtactcatg cctctaatcc tgtgtatgca acattaaaaa ttcggatcta tttttatgat 900 tcgataacaa attaataaag atttactttt atttcatgat tctcaagtac atgatttaca 960 tatgccttgt ctgttgcgaa acgaacagct ctaattacat tgttaatccc aataacacct 1020 attctatcta aatacagtaa aactaaatac ttaaatctat ttaagtaagt cttcccagaa 1080 gctcgaattg atgtcgtcca gacttggaag ttcagaaaag ctttgtgaag attcagtgcc 1140 ctcctgaggt tgtggttgca cctgatttga atgtggtaga ttctggtcga tgtgtaaagt 1200 ggctcttcta ctcgacacat cctgaaatag aggggatttg gaacatccca aataaaaacg 1260 gaattctctg cctgatgcgc agtgatgctc tcccctgtgc gtgaatccat tgttggagca 1320 gttgatgtgt aggaatattg aacagccaca gtttaggtct atacgtttcc tacgtattgc 1380 tcttctctta gcgttcctgt gatgaggttt gatagagggg ggagttgagg aagatgaatt 1440 tagcattttt gagagtccac tgttttagtg acgcattttc ctctttgtcg aggaaatctt 1500 tatagctccc cccgtctcct ggattgcaca gcacgattga tggtatgccc cctttaattt 1560 gaactggctt gccgtactta cagttggact gccaatcttt ctgggcccca atcaactctt 1620 tccagtgctt taactttaag tagtgcggtg cgacgtcatc gatgacgtta tattccactt 1680 cgttcgagta aaccctagaa ttgaaatcta aatgaccact caagtaatta tgtgggccta 1740 aagaacgagc ccacattgtc ttccctgttc ttgaatcacc ctcgacgatg atactaatag 1800 gtctttccgg ccgcgcagcg gcacctcttc caaaataatc atcagcccat tcctgcatct 1860 cgtcaggaac agcgttgaat gatgagagtt gaaacggagg aacccatggt tctggagcct 1920 tttgaaagat cctatttgca ttattgacca aattatgata atgaagaaaa taatgagcag 1980 gttgttcttc ttttaaaatt tgtagtgcag attcagcaga cccagcgttt aacgcttttg 2040 catatgaatc attggttgtc tgtatacctc ctctacttga tcttccatcg atctggaaaa 2100 ctccaaaatc aaggaattct ccgtctttct ccatgtatga tttaacgtct gagctgctct 2160 tagctccctg aatgttcgga tggaaatatg ctgatctgct tgtggaactg aggtcgaaga 2220 gtttctggtt gtatatttgg actttaccct cgagttgtat aagcacatgg agatgaggtt 2280 ccccatcttc gtggagttcc cttgcgacac gaatgaataa tttattcgaa ggtagagaga 2340 tattctggag ttgaaagaga gcctcttctt ttgttaaaga acagcgagga tatgttaaga 2400 atatattttt agccgatagt ctaaattttt tcggcggggg catttttgta ataaagagcg 2460 taacaccaat tgggttcctc tccaaaatgt ctaagcaatt ggtgttttgg tgttgaattt 2520 atactacaac tctcaatact agaactctcc aaaagcggcc atccgtataa tatt 2574 //