ID KC162001; SV 1; linear; genomic RNA; STD; VRL; 2410 BP. XX AC KC162001; XX DT 17-FEB-2013 (Rel. 115, Created) DT 06-NOV-2014 (Rel. 122, Last updated, Version 2) XX DE Grapevine fanleaf virus strain R6 P2 polyprotein gene, partial cds. XX KW . XX OS Grapevine fanleaf virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-2410 RX DOI; 10.1094/PHYTO-11-12-0310-R. RX PUBMED; 23718838. RA Gottula J., Lapato D., Cantilina K., Saito S., Bartlett B., Fuchs M.; RT "Genetic variability, evolution, and biological effects of Grapevine RT fanleaf virus satellite RNAs"; RL Phytopathology 103(11):1180-1187(2013). XX RN [2] RP 1-2410 RA Gottula J., Fuchs M.; RT ; RL Submitted (13-NOV-2012) to the INSDC. RL Plant Pathology and Plant-Microbe Biology, Cornell University New York RL State Agricultural Experiment Station, 630 W. North Street, Geneva, NY RL 14456, USA XX DR MD5; 8d20c9b48d4e52b1bf795ed19c9189a1. XX CC ##Assembly-Data-START## CC Assembly Method :: Lasergene v. 9 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2410 FT /organism="Grapevine fanleaf virus" FT /host="Vitis vinifera" FT /strain="R6" FT /mol_type="genomic RNA" FT /country="USA" FT /collection_date="14-May-2010" FT /db_xref="taxon:12274" FT CDS <1..2221 FT /codon_start=2 FT /product="P2 polyprotein" FT /note="contains 2B and 2C" FT /db_xref="GOA:M1JZS1" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:M1JZS1" FT /protein_id="AGE91710.1" FT /translation="PTGENTLEILYNPVSDEEMDDYRDRGMSAVVIDALEIAINPFGMP FT GNPTDLTVVATYGHERNMERAFIGSSSTFLGNGLARAIFFPGLQYSQEEPRRESLIRLY FT VASTNATVDPDSVLAAISVGTLRQHIGSLHYRTVASSVHTAQVQGTTLRATMMGNAVVV FT SPEGGLVTGVPEANVHIGGSSSMRMVGPLAWENVEEPGQTFSIRSRSRSVRIDRNVDLP FT QLEAEPRMSSTVRGLAGRGVVYIPKDCQEKRYLGTLNIRDMISDFKGVQYEKWITAGLV FT MPIFKVVVRLPANAFTGLTWVMSFDAYNRITSRITTSADPVYTLSVPHWLIHHKLGTFS FT CEIDYGELCGHAMWFRSTTFESPRLHFTCLTGNNKELAADWQAVVELYAELEEATSFLG FT KPTLVFDPGVFDGKFKFLTCPPIFFDLTAVTALKSAGLTLGQVPMVGTTKVYNLNSALV FT SCVLGMGGTIKGRVHICAPIFYSIVLWVVSEWNGTTMDWNELFKYPGVYVEEDGSFEVK FT IRSPYHRTPARLLAGQSQRDMSSLNFYAIAGPIAPSGETARLPIVVQIEEIVRPDLSLP FT SFEEDYFVWVDFSEFTLDKEEIEIGSRFFDFTSNTCRVSMGENPFAAMIACHGLHSGIL FT DLKLQWSLNTEFGKSSGSVTITKLVGDKAMGLDGPSQVFALQKLEGTTELLIGNFAGAN FT PNTHFSLYSRWMAIKLDQAKSIKVLRVLCKPRPGFSFYGRTSFPV" XX SQ Sequence 2410 BP; 595 A; 461 C; 606 G; 748 T; 0 other; accaacaggg gaaaatactt tggaaatatt gtataaccct gtttctgatg aggaaatgga 60 tgactaccgt gacaggggta tgtcagcagt cgtgattgat gcgcttgaaa ttgccattaa 120 tccttttggg atgccaggca atccgactga tcttactgtc gttgcaacat atgggcatga 180 acgtaatatg gagcgtgcct ttattggttc ttcttccacg tttcttggaa acgggttagc 240 aagagccatt ttctttcccg gtttgcaata tagccaggaa gaacctaggc gcgaatcttt 300 aattcgcttg tatgttgctt caactaacgc cacagttgat cctgattcag ttttggcggc 360 cattagtgtt ggaactttgc gccagcacat tggttcgttg cactatagaa ctgtggctag 420 ttcggtgcat actgcccaag tgcaaggcac taccctaagg gcgactatga tgggtaatgc 480 tgtcgtagtt tctcctgaag gaggccttgt aactggtgtg cctgaagcca atgtacatat 540 tggtggaagt tccagtatgc gaatggtagg tcccctggca tgggaaaatg ttgaggaacc 600 agggcaaacc ttctctatca gaagtcgatc gcgatctgtg aggattgaca ggaatgttga 660 ccttccccaa cttgaggccg aacccagaat gagttcgacc gtgagggggt tggctggtag 720 aggagttgtt tatattccca aggattgcca ggagaaaagg tacttgggca ccctaaatat 780 acgtgacatg atttcagatt tcaagggtgt ccagtacgaa aaatggataa ctgcaggctt 840 ggtcatgcct atttttaaag tcgttgttag gctacctgca aacgccttta ctgggctgac 900 atgggtgatg agcttcgatg cttataatcg gataactagt aggataacta ctagtgcaga 960 tcctgtatat accctgtctg tccctcattg gcttatccat cataagttgg gcacgttttc 1020 ttgtgagatt gactatggag aattgtgtgg ccatgccatg tggtttagat ccacaacttt 1080 tgaatctcca aggttgcatt tcacttgttt aacgggcaac aacaaggagt tggcggcaga 1140 ctggcaagct gtcgtagaac tgtatgccga gcttgaagag gctacgtcct ttcttggaaa 1200 gcctacattg gtgtttgatc caggggtttt cgatggcaaa ttcaagttct taacttgccc 1260 tcccatattc tttgatttga cagccgttac ggctctcaaa agcgctgggc tgacgttggg 1320 ccaagtccca atggttggta ctacaaaagt ttacaatcta aacagcgctc ttgtgagttg 1380 tgttctaggt atgggaggta ctattaaagg aagggtgcat atttgcgcgc caatctttta 1440 tagtattgtt ttgtgggttg tcagtgagtg gaacgggacc actatggatt ggaatgaact 1500 gttcaaatat cccggggtgt atgtggaaga agatggaagt tttgaagtta aaatccgctc 1560 tccatatcac cgaactcctg ctagattgct tgctggtcaa agccagaggg acatgagctc 1620 tctgaatttc tatgcaatag caggacccat tgctccatcg ggggaaacag cacgactccc 1680 tattgttgta caaattgaag aaattgtgcg tccagacctt tccctaccaa gttttgagga 1740 agattacttt gtgtgggtgg atttttctga attcactctt gacaaagaag agattgagat 1800 tggttctcgt ttctttgatt ttacttcaaa tacttgtagg gtttctatgg gagagaaccc 1860 gtttgcagca atgattgctt gccatggatt acatagtggt atattggacc tcaaacttca 1920 atggagtcta aatactgaat ttggcaagag cagtgggagc gtcaccatta caaagctggt 1980 tggtgacaag gccatgggcc tggatgggcc ttcacaagtg tttgccttac agaaactgga 2040 gggaactacg gagttgttga ttggaaattt tgcaggtgca aatccaaaca ctcatttttc 2100 tctctatagt cggtggatgg caatcaaatt ggaccaagca aagagtatca aggtactccg 2160 cgttttgtgt aaaccccgtc cgggttttag tttttatgga agaaccagct ttccagtcta 2220 gggtatctga ctttaaaaga cccatataca tatgtttatt tttgttgtaa tcgtgtgtaa 2280 tgttttgtgt tattgtttgt tttaacttgt tttctgcctt tgtgtgttta ttttcatgct 2340 tttggtggcg atagtgtgtt gtttgtcctt tggacacact gccttgttgg acacaaaaag 2400 attttccttt 2410 //