ID KC153490; SV 1; circular; genomic DNA; STD; VRL; 2660 BP. XX AC KC153490; XX DT 23-JAN-2013 (Rel. 115, Created) DT 08-MAY-2018 (Rel. 136, Last updated, Version 2) XX DE Melon chlorotic leaf curl virus segment DNA A, complete sequence. XX KW . XX OS Melon chlorotic leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2660 RA Maliano M.R., Melgarejo T., Rojas M., Barboza N., Hernandez E., Ramirez P., RA Gilbertson R.L.; RT "Molecular Characterization and Host Range of the Squash Yellow Mild Mottle RT Virus, a Cucurbit-Infecting Begomovirus"; RL Unpublished. XX RN [2] RP 1-2660 RA Maliano M.R., Melgarejo T., Rojas M., Barboza N., Hernandez E., Ramirez P., RA Gilbertson R.L.; RT ; RL Submitted (11-NOV-2012) to the INSDC. RL Plant Pathology, UC Davis, One Shields Avenue, 354 Hutchison Hall, Davis, RL CA 95616, USA XX DR MD5; d237f33449ad5b0d27233fb0fb84d476. XX FH Key Location/Qualifiers FH FT source 1..2660 FT /organism="Melon chlorotic leaf curl virus" FT /segment="DNA A" FT /host="Cucurbita sp." FT /isolate="2A" FT /mol_type="genomic DNA" FT /country="Costa Rica" FT /collection_date="08-Aug-2003" FT /db_xref="taxon:165826" FT gene 203..958 FT /gene="AV1" FT CDS 203..958 FT /codon_start=1 FT /gene="AV1" FT /product="capsid protein" FT /db_xref="GOA:L7UV46" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:L7UV46" FT /protein_id="AGC54791.1" FT /translation="MVKRDAPWRLMAGTSKVSRSANYSPRGGMGLKFNKAAAWVNRPMY FT RKPRIYRTLRGPDIPKGCEGPCKVQSFEQRHDISHLGKVLCISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVIFWLTRDRRPYGIPMDFGQVFNMFDNEPSTATI FT KNDLRDRFQVLHRFYAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYDNHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSITN" FT gene complement(955..1359) FT /gene="AC3" FT CDS complement(955..1359) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:L7URU5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:L7URU5" FT /protein_id="AGC54792.1" FT /translation="MVMDLRTWEDITVYQAENSVFIWEVPNPLYFKIYNVEDPLYTHTR FT IYHIQIRFNHNLRRALNLHKAYLNFQVWTESIRASGTTYLNRFRHLVMLYLDRLGVIGL FT NNVIRAVSWATDRSYVTGVIEDHKIKFNIY" FT gene complement(1100..1495) FT /gene="AC2" FT CDS complement(1100..1495) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional activator protein" FT /db_xref="GOA:L7UW13" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:L7UW13" FT /protein_id="AGC54793.1" FT /translation="MPNSSSSTAPSIKAQHKIAKTRAIRRRRIDLNCGCSIFLHLSCQK FT NGNGFTHLGRHHCVSGGEFRFYLGSSKSPLFQDIQRGGSTLYAHQNIPHTNPVQPQSEE FT STKSSQSVPEFPSMDGIDSSFWDDLFK" FT gene complement(1437..2516) FT /gene="AC1" FT CDS complement(1437..2516) FT /codon_start=1 FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:L7UV10" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:L7UV10" FT /protein_id="AGC54794.1" FT /translation="MPRNPKSFRLATRNIFLTYPKCDVPKDEVLQMLQGLSWSVVKPTY FT IRVAREEHSDGFPHLHCLVQLSGKSNIKDAGFFDLTHPRRSARFHPNIQAAKDTNAVKN FT YITKEGDYCESGQYKVSGSSKSNKDDVYHNAVNAASAGEALDIIKAGDPKTFIVSYHNI FT TANVERLFQKPPEPWVPPFELSSFTSVPKELKDWADHYFNECSAARPDLIRKSNSVCNR FT PISVIVEGDSRTGKTMWARALGPHNYLSGHLDFNSRVFSNDVKYNVIDDIAPHYLKLKH FT WKELIGAQRDWQSNCKYGKPVQIKGGIPSIVLCNPGEGSSYKDFLDKAENAALREWTLK FT NAKFIFINCPLYQSTTQDR" FT gene complement(2072..2449) FT /gene="AC4" FT CDS complement(2072..2449) FT /codon_start=1 FT /gene="AC4" FT /product="hypothetical protein" FT /db_xref="UniProtKB/TrEMBL:L7UYC9" FT /protein_id="AGC54795.1" FT /translation="MFPKMKFFKCFKVSHGRSSNRRISVSPERNIQMDSRTYTASFNFQ FT ASPTSRMLDFSTLLTPEGLPDFTRTFKLPKTPMPSRITSPKKVIIVNPGSTRCLGVQSP FT IKTTFITTPSMQQVRERLSTL" XX SQ Sequence 2660 BP; 714 A; 573 C; 597 G; 776 T; 0 other; accggatggc cgcccttttt ttggtgtcct acactttatc ccaagcctag gcccaaagca 60 accacaatct ttgctttttg ggaccactac aattatacga ccaatcagat tgacccatga 120 cagtctagat aataatgact tggtgactaa gcgtggtccc tataaattaa agctgtctaa 180 gcccatacct ctttaattcg aaatggttaa gagggatgcc ccatggcgtt taatggcggg 240 gacctccaag gtttcccgct ctgctaatta ttcgcctcgt ggaggtatgg gccttaaatt 300 caataaggcc gctgcatggg ttaacaggcc tatgtacagg aagcccagaa tttatcgcac 360 attgagaggt cccgacatcc ccaaaggatg tgaagggcca tgcaaggttc agtcatttga 420 gcagcggcat gatatctctc atcttggtaa agtgttatgt atttcggacg tgacgcgtgg 480 taatggtatt actcatcgcg taggtaagcg tttttgtgtt aagtctgtat atattttagg 540 caagatatgg atggacgaga atataaagtt gaagaaccat acgaacagcg ttatcttctg 600 gttaacacga gaccgtcgac catatggaat tcctatggat ttcggccaag tattcaacat 660 gttcgacaac gagcctagta ccgccaccat caagaacgat ctccgcgacc gtttccaagt 720 acttcaccgg ttctatgcga aagttaccgg tggacaatac gctagcaacg aacaagcatt 780 ggtacggcgc ttttggaagg tgaacaacca tgttgtgtac aatcaccaag aagcagggaa 840 gtatgataac cataccgaga acgcgttgtt attgtatatg gcatgtactc atgcctctaa 900 ccctgtgtat gcgacattga agattcggat ctatttttat gattcgataa ccaattaata 960 aatattgaac tttattttat gatcttcaat gacaccagtt acatatgatc gatctgtcgc 1020 ccacgaaaca gctcgtatga cgttatttag accaataacg cctaatctat ctaagtacaa 1080 cataactaaa tgcctaaatc tatttaaata agtcgtccca gaagctcgaa tcgattccgt 1140 ccatacttgg aaattcaggt acgctttgtg aagatttagt gctctcctca gattgtggtt 1200 gaaccggatt tgtatgtggt atattctggt gtgcgtatag agtggatcct ccacgttgta 1260 tatcttgaaa tagaggggat ttggaacttc ccagataaaa acggaattct ccgcctgata 1320 cacagtgatg tcttcccaag tgcgtaaatc cattaccatt cttttgacag ctgagatgga 1380 ggaatatgga acagccgcag ttcaagtcga tgcgtcttcg acggatagct cttgttttag 1440 cgatcttgtg ttgtgctttg atagaggggg cagttgatga agatgaattt ggcatttttg 1500 agtgtccact ctctaagtgc tgcattttca gctttgtcga ggaaatcttt atagctggac 1560 ccctctccag gattgcacag cacgattgat gggataccgc ctttaatttg aaccggcttt 1620 ccatatttac agttggactg ccagtccctc tgggccccga tcaattcttt ccagtgcttt 1680 agctttaaat aatgtggagc aatgtcatca atgacgttat acttgacgtc attcgagaaa 1740 accctagaat tgaaatccag atgaccactc aaatagttat gtgggcctaa agcacgagcc 1800 cacattgttt tgccagttct agaatcacct tcgactatta cactaatagg tctattacac 1860 acgctatttg attttcgtat taaatctggc cgcgcagcgg aacactcatt aaaataatga 1920 tcagcccaat cttttaactc ttttggaact gacgtgaacg aagacagttc aaatggggga 1980 acccatggtt ctggaggttt ttgaaacagg cgctcgacgt tagccgttat gttatggtaa 2040 ctcacgataa acgtttttgg atccccagcc tttataatgt cgagagcctc tcccgcactt 2100 gctgcattga cggcgttgtg ataaacgtcg tctttattgg actttgaact cccagacacc 2160 ttgtactgcc cggattcaca ataatcacct tctttggtga tgtaattctt gacggcattg 2220 gtgtctttgg cagcttgaat gttcgggtga aatcgggcag accttctggg gtgagtaagg 2280 tcgaaaaatc cagcatcctt gatgttggac ttgcctgaaa gttgaacgag gcagtgtaag 2340 tgcgggaatc catctgaatg ttcctctcgg gcgacacgga tatacgtcgg tttgacgacc 2400 gaccatgaga gaccttgaag catttgaaga acttcatctt tgggaacatc gcacttcgga 2460 tacgttaaaa aaatgttcct ggtagctaaa cggaatgatt tagggtttcg tggcattttt 2520 tgtaaatctg acccaggaca ccaggaggag ctctctcaaa agtcctatat ttgtggtgtc 2580 ctggtgtcct atatatacta caaggctcta gaaggctcct taggacacca ggggtaaatt 2640 cggccatccg caataatatt 2660 //