ID   KC149505; SV 1; linear; genomic RNA; STD; VRL; 1370 BP.
XX
AC   KC149505;
XX
DT   12-FEB-2013 (Rel. 115, Created)
DT   12-FEB-2013 (Rel. 115, Last updated, Version 1)
XX
DE   Papaya ringspot virus P isolate Pune3 helper component proteinase gene,
DE   partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus P
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1370
RA   Basavaraj Y.B., Jain R.K.;
RT   "Studies on genetic diversity of PRSV-P and -W populations from different
RT   hosts and locations in India";
RL   Unpublished.
XX
RN   [2]
RP   1-1370
RA   Basavaraj Y.B., Jain R.K.;
RT   ;
RL   Submitted (09-NOV-2012) to the INSDC.
RL   Division of Plant Pathology, Advanced Centre for Plant Virology, Indian
RL   Agricultural Research Institute, Pusa Campus, New Delhi, Delhi 110012,
RL   India
XX
DR   MD5; a10550ecf9bcc7fe0d508e424dc50169.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1370
FT                   /organism="Papaya ringspot virus P"
FT                   /host="Carica papaya"
FT                   /isolate="Pune3"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Pune, Maharashtra"
FT                   /isolation_source="leaf showing complete, uniform and
FT                   typical yellowing of leaf lamina with leathery leaf
FT                   symptoms"
FT                   /collected_by="Jain RK"
FT                   /collection_date="28-Aug-2012"
FT                   /note="pathotype P"
FT                   /db_xref="taxon:12206"
FT   CDS             <1..>1370
FT                   /codon_start=1
FT                   /product="helper component proteinase"
FT                   /note="HCpro"
FT                   /db_xref="GOA:M1GUE1"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:M1GUE1"
FT                   /protein_id="AGE32248.1"
FT                   /translation="NDVAEKFWLGFNRAFLRHRKPTDHTCTSDMDVTMCGEVAALATII
FT                   LFPCHKITCNTCMSKVKGRVIDEVGEDLNCELERLREALSSYGGSFGHVSTLLDQLNKV
FT                   LNARNMNDEAFKEIAKKIDAKKESPWTHMTAINNTLIKGSLATGYEFERASDNLREIVR
FT                   WHLKRTESIKAGSVESFRNRRSGKAHFNPALACDNQLDRNGNFLWGERQYHAKRFFANY
FT                   FEKIDHSKGYEYYSQRQNPNGVRKIAIGNLIFSTNLERFRQQMVEHHIDQGPITRECIA
FT                   LRNNNYVHVCSCVTLDDGTPATSELKTPTKNHIVLGNSGDPKYVDLPTLESESMYIAKK
FT                   GYCYMNIFLAMLINIPENEAKDFTKRVRDLVGSKLGEWPTMLDVATCANQLIIFHPDAA
FT                   NAELPRILVDHRQKTIHVIDSFGSVDSGYHILKANTVNQLIQFAREPLDSEMKHYIVG"
XX
SQ   Sequence 1370 BP; 439 A; 256 C; 309 G; 366 T; 0 other;
     aatgacgtgg ctgaaaaatt ctggctcggt tttaataggg cttttctgcg gcacagaaaa        60
     ccaacggatc acacttgcac atctgacatg gacgttacaa tgtgtgggga ggtggcggct       120
     cttgcaacta taatcctgtt tccgtgtcac aaaataactt gcaatacttg catgagcaaa       180
     gtaaagggga gagtcattga cgaagttggt gaggacttga attgtgaact tgagcgcttg       240
     cgtgaagctc tttcatcata tggaggatca ttcgggcatg tctcaacatt acttgatcaa       300
     ttgaataaag ttttgaacgc gcgaaacatg aacgatgaag cttttaaaga aattgctaaa       360
     aagattgatg caaagaaaga aagtccttgg actcacatga cagctattaa caatacgctc       420
     ataaaaggtt cgctggcaac tggctacgaa tttgaaagag cgtctgataa tcttcgggag       480
     attgtgagat ggcatctcaa aaggacagaa tcaataaaag ctggcagcgt tgaaagtttc       540
     agaaataggc gttctggaaa agctcacttc aacccagctc ttgcatgtga taatcaatta       600
     gataggaatg gcaatttctt atggggtgag aggcaatacc acgccaaaag attttttgcc       660
     aactattttg agaagattga tcacagtaag ggttatgagt actacagtca acgccaaaat       720
     ccaaatggtg ttagaaaaat agccattggc aatttgatat tttcaacaaa tttggaaaga       780
     tttcggcagc aaatggttga acaccacatt gatcaaggac cgattactcg cgaatgcatt       840
     gcattacgca ataacaatta tgtgcatgta tgtagttgcg tgactttaga tgatggaact       900
     ccagcaacaa gtgagttgaa gactcctact aagaaccata ttgttcttgg taattctggt       960
     gaccctaagt acgttgactt gccgactctt gagtctgaat caatgtacat agccaagaaa      1020
     ggttactgtt acatgaacat ctttctagcg atgctcataa acatacctga gaatgaggca      1080
     aaggacttca cgaagagggt tcgtgatctt gtgggttcaa aactcggtga atggccaacg      1140
     atgttagacg tcgcaacatg cgcaaatcag ctcataatct tccatcctga cgcagctaat      1200
     gcagaattgc cgcgaatttt agtagaccac cgacagaaaa caatacatgt cattgactct      1260
     tttgggtctg tggattctgg atatcatata ttaaaagcaa acacagttaa tcagctgatc      1320
     caattcgcta gggaaccact cgatagtgaa atgaagcact acattgtcgg                 1370
//