ID   KC149504; SV 1; linear; genomic RNA; STD; VRL; 1370 BP.
XX
AC   KC149504;
XX
DT   12-FEB-2013 (Rel. 115, Created)
DT   12-FEB-2013 (Rel. 115, Last updated, Version 1)
XX
DE   Papaya ringspot virus P isolate WB-1 helper component proteinase gene,
DE   partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus P
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1370
RA   Basavaraj Y.B., Jain R.K.;
RT   "Studies on genetic diversity of PRSV-P and -W populations from different
RT   hosts and locations in India";
RL   Unpublished.
XX
RN   [2]
RP   1-1370
RA   Basavaraj Y.B., Jain R.K.;
RT   ;
RL   Submitted (09-NOV-2012) to the INSDC.
RL   Division of Plant Pathology, Advanced Centre for Plant Virology, Indian
RL   Agricultural Research Institute, Pusa Campus, New Delhi, Delhi 110012,
RL   India
XX
DR   MD5; 261b1f01727a1d7c819cd79cb733a46a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1370
FT                   /organism="Papaya ringspot virus P"
FT                   /host="Carica papaya"
FT                   /isolate="WB-1"
FT                   /mol_type="genomic RNA"
FT                   /country="India:West Bengal"
FT                   /isolation_source="leaf showing blistering and shoe string
FT                   symptom"
FT                   /collected_by="Jain RK"
FT                   /collection_date="27-Jul-2011"
FT                   /note="pathotype P"
FT                   /db_xref="taxon:12206"
FT   CDS             <1..>1370
FT                   /codon_start=1
FT                   /product="helper component proteinase"
FT                   /note="HCpro"
FT                   /db_xref="GOA:M1GNJ5"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:M1GNJ5"
FT                   /protein_id="AGE32247.1"
FT                   /translation="NDVAEKFWLGFNRAFLRHRKPTDHTCTSDMDVTMCGEVAALATII
FT                   LFPCHKITCNTCMSKVKGRVIDEVGEDLNCELERLRETLSSYGGSFGHVSTLLDQLNRV
FT                   LNARNTNDGAFKEIAKKIDEKKESPWTHMTVINNTLIKGSLAIGYEFERASDSLREIVR
FT                   WHLKRTESIKAGSVESFRNKRSGKAHFNPALTCDNQLDKNGNFLWGERQYHAKRFFANY
FT                   FEKIDHSKGYEHYSQRQNPNGVRKVAIGNLIFSTNLERFRQQVVEHHIDQGPITRECIA
FT                   LRNNNYVHVCSCVTLDDGTPATSELKTPTKNHIVLGNSGDPKYVDLPTLESDSMYIAKK
FT                   GYCYMNIFLAMLINIPENEAKDFTKRVRDLVGSKLGEWPTMLDVATCANQLTIFHPDAA
FT                   NAELPRILVDHRQKTMHVIDSFGSIDSGYHILKANTVNQLIQFAREPLDSEMKHYIVG"
XX
SQ   Sequence 1370 BP; 433 A; 273 C; 316 G; 348 T; 0 other;
     aatgacgtgg ctgaaaaatt ctggctcggt tttaataggg cttttctgcg gcacagaaaa        60
     ccaacagatc acacttgcac gtctgacatg gacgttacaa tgtgtgggga ggtggcggct       120
     cttgcaacta taatcctgtt tccgtgtcac aaaataacgt gcaatacttg catgagcaaa       180
     gtaaagggaa gggttattga cgaagtcggt gaggatttga attgtgaact cgaacgcttg       240
     cgcgaaactc tttcgtcata tggaggatca tttgggcatg tctcaacatt acttgatcaa       300
     ctgaacagag tcctgaacgc gcggaacacg aatgatggag cttttaaaga aattgctaag       360
     aaaattgatg aaaagaagga gagtccttgg actcacatga cagttattaa caacacgctc       420
     atcaaaggtt cgctagcaat tggttacgaa tttgaaagag cgtctgacag tcttcgggag       480
     attgtgagat ggcatctcaa aaggacagag tcaataaaag ctggcagcgt tgaaagcttc       540
     agaaataagc gttctggaaa agcccacttc aacccagctc ttacatgtga taatcagttg       600
     gacaagaatg gcaatttctt atggggtgag aggcaatatc acgccaaaag attctttgcc       660
     aactattttg agaaaattga tcacagtaag ggttacgagc actacagtca acgccagaat       720
     ccaaatggtg tcagaaaagt agccattggc aacttgatat tttcaacaaa tttggaaagg       780
     tttcggcagc aagtggttga acaccacatt gatcaaggac cgatcactcg cgaatgcatt       840
     gcgttacgca ataacaatta tgttcatgta tgtagctgcg taactttgga tgatgggacc       900
     ccagcaacaa gtgagttgaa gactcctacc aaaaaccata tcgttcttgg taattctggt       960
     gatcctaagt acgttgactt accaactctt gagtctgatt caatgtacat agccaagaaa      1020
     ggttactgct acatgaacat ctttttagcg atgctcataa acatacctga gaatgaggca      1080
     aaggacttca cgaagagggt tcgtgacctt gtgggttcaa aactcggaga atggccaacg      1140
     atgttagatg tcgcaacatg cgcaaatcag ctaacaatct ttcaccctga cgcagccaat      1200
     gcagaattgc cacgaatttt agtggatcac cggcagaaaa caatgcatgt catcgattct      1260
     tttggttcca tagattctgg ataccatata ttaaaggcaa acacggtcaa tcagctgatc      1320
     caattcgcaa gggaaccact cgatagtgaa atgaagcact acattgtcgg                 1370
//