ID KC134292; SV 1; linear; genomic RNA; STD; VRL; 3617 BP. XX AC KC134292; XX DT 31-JAN-2013 (Rel. 115, Created) DT 31-JAN-2013 (Rel. 115, Last updated, Version 1) XX DE Rice black streaked dwarf virus isolate HB-wheat segment S4, complete DE sequence. XX KW . XX OS Rice black streaked dwarf virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus. XX RN [1] RP 1-3617 RA Li Y., Fan Z.; RT "Complete genomic sequence of Rice black streaked dwarf virus isolated from RT wheat"; RL Unpublished. XX RN [2] RP 1-3617 RA Li Y., Fan Z.; RT ; RL Submitted (02-NOV-2012) to the INSDC. RL Plant Pathology, China Agricultural University, Yuanmingyuan West 2, RL Haidian District, Beijing 100193, China XX DR MD5; e4bc8479874a088c825f1f4d5f4a2dc9. XX CC Genbank Accession Numbers KC134289-KC134298 represent the complete CC genome of Rice black streaked dwarf virus isolate HB-wheat. CC ##Assembly-Data-START## CC Assembly Method :: DNAMAN v. 6.0 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3617 FT /organism="Rice black streaked dwarf virus" FT /segment="S4" FT /host="wheat" FT /lab_host="maize" FT /isolate="HB-wheat" FT /mol_type="genomic RNA" FT /country="China:Hebei Province, Baoding" FT /collection_date="20-Mar-2012" FT /db_xref="taxon:10990" FT CDS 34..3543 FT /codon_start=1 FT /product="P4" FT /db_xref="UniProtKB/TrEMBL:L7Q565" FT /protein_id="AFX68409.1" FT /translation="MDPGQVLKYLLSQNYETKIQQLEQWQKQMEAAGYTSEYLNQSSDV FT LKVKSKIEESKRRLFFISANYWQGSLFTKTVAPNNLFLGFSECSGVNKTIFDAKNCDFG FT RFQLSFNCIPKYWILSGVFDELICYDKSKTKVTISKLKNKISIRINDFMYIVPIINSFS FT FLSGNSDVIIDENCEFDILLRISQSFNEIMIDVYNFSFDDSNLNIEFRPTSIKFEGDAN FT YFSVSSNLIFNSIDGYLNRDNLNMRKYFCYAISMNNLNMINDSLNKWESKQLAKKKNLV FT SSLHQLVLNAMISISSLEKDVARVKSLKMELSYQRNISIHFPNHRIFLNKYPHDLFSPS FT LKTQFVGWNFTYGERDRFISPIVCDVETKLKTNSSIISNAFTSYFQCNSFGNPDNMFLL FT NVTDKNGNTKKVICEAIYSLKYKDFKYVDLKSINKKDNFQNQVYFFGLSEIELYDEHPK FT LQALSMVSENEGGLYHLFYSNCSLVLSFKIISESIEYLGVVSPKFTSEFEYNGKTLKLS FT GNLTLSEDFDGVQMKKCLTSEEFVLIEDVKCLFTSFICEGKRSSSKTKFNDKTWPGIRS FT RFYDNDAYLSAIQAHCHSLKLNTPFRSYDNYSDILYSANDNFHYVEANGCFTERKNYLY FT WDVPISNFEMMFDESPCVKLSNQSILTFFVNYRHLYEVVEGKNHPCLLSCKHHVEDYSI FT TQIDSPPILFLPFNRPVDIIYLEQSSGDEVLNEMKIISFEVKGFTAYVLPENLNTTMNI FT VGKLLNYESELELVYQTNDVISDMMNNFDKRLSDLEKFCDFLDKSYIKKAGSSTSLYHL FT LGDIFTFVGEICVLQFPILGFCFILTGIMVDALGKITQEDIFDGISEIAFGGLLLCLGK FT RKPKFTYLEELGFGRRRASSNSYISEMASSVGRRRSYSSYHHYESISDLSPSLSIRDRI FT MNQIRSHNPSVFDLHHNSGIILELKQKQKENYSLLNSSYSRMKRSISNVINDEVINYKL FT SCDNPSSCEVYELCIKTFDYYPILLDDNSFFIIKIQFKIKITSNPVKMKIEDIERSYFH FT TSDASRFRVFDAAKFDVIKHLNKSLLSFTFNEISNYLCVISLLSKTSSIDNMLIENHDK FT LYDTLYISNHKSYMSSDPIHLRQVDFTIFKTMHTYSFSDHAPDDSYFKMISSIVKHPEI FT LRF" XX SQ Sequence 3617 BP; 1211 A; 514 C; 593 G; 1299 T; 0 other; aagttttttt ccatgtcttt aaattgaaca gggatggatc caggacaagt cctcaaatac 60 cttttgtctc agaattatga aaccaaaata caacaactag aacaatggca aaaacagatg 120 gaagcagcag gctacacaag cgaatactta aaccaatctt cagacgtgct taaagttaaa 180 agtaaaattg aagaatcaaa aagacggcta ttttttatca gtgctaatta ctggcaagga 240 agcttattta ctaaaacagt tgctccaaac aatttgtttc ttggatttag tgaatgctca 300 ggcgttaaca agactatttt tgatgctaaa aattgtgact tcggacggtt ccagttgagt 360 tttaattgta ttcctaaata ttggatattg tcaggtgttt ttgatgaatt aatttgctat 420 gataaaagta aaacaaaagt aacaattagc aagctaaaaa ataaaatttc aattcgtatt 480 aatgatttta tgtatattgt tccaatcata aacagtttct cttttttatc aggcaattca 540 gatgtcataa ttgatgaaaa ttgtgaattt gacattttgt taaggatttc tcagtctttt 600 aatgaaataa tgattgatgt ttataatttc agttttgacg attctaatct taatattgag 660 tttagaccga cctctatcaa atttgaaggt gatgctaatt atttttctgt ttcctctaat 720 ttaatattta atagtattga cggttacttg aatcgagata atttaaatat gagaaaatat 780 ttttgttatg ctataagtat gaataattta aatatgatca atgactccct aaataaatgg 840 gaatcgaaac aacttgcgaa aaagaaaaat ttagtaagca gcttacatca attggtttta 900 aatgctatga taagtatttc ttctctggaa aaagatgtag caagagtcaa atctttaaaa 960 atggagttaa gttatcaaag aaacatttca attcatttcc caaatcatag aatctttttg 1020 aataagtacc ctcatgattt gttttcccct tctttgaaaa cacaatttgt aggttggaat 1080 tttacttatg gcgaaagaga tagattcatt tctcctattg tttgtgatgt agagacaaaa 1140 ttaaaaacta attcatctat cattagtaac gcttttactt cttattttca atgtaatagt 1200 tttgggaatc cagataatat gtttttgctt aacgtaacag acaaaaatgg taacactaaa 1260 aaagtaatct gtgaagccat ttattcccta aagtacaaag attttaagta tgttgatttg 1320 aaatcaataa ataagaaaga taattttcag aatcaagtgt attttttcgg tttaagtgaa 1380 attgagctat atgatgaaca tccaaaactt caagcattat ctatggttag tgagaatgaa 1440 ggtggtcttt atcatttgtt ttacagtaat tgttctctag tgctttcgtt taaaattatt 1500 tctgagagta ttgaatattt gggtgtcgtg tctcctaaat ttacaagtga attcgaatat 1560 aatggtaaga ctctaaagct ttctggtaac ttaactttaa gtgaagattt tgatggtgtt 1620 caaatgaaga aatgtttaac atcagaagag tttgttttaa ttgaagacgt taaatgttta 1680 ttcacatctt ttatttgcga aggcaaacgc tcgtcatcta agactaaatt taacgataaa 1740 acttggcccg gtattagaag tagattttac gataatgatg cttatttaag tgctattcaa 1800 gcacattgtc attctcttaa attaaatact ccttttcgat cttatgacaa ttatagcgac 1860 attttgtatt ctgctaatga taattttcat tatgttgaag cgaatggctg ttttactgaa 1920 agaaaaaatt atctttattg ggatgttcca atttctaatt ttgaaatgat gtttgatgag 1980 tcaccttgtg taaaattaag taatcaaagt atcttaacct ttttcgttaa ttatcgtcat 2040 ctctatgaag tagttgaagg taaaaatcat ccttgtctcc tttcttgtaa gcatcatgtt 2100 gaagattatt ctataaccca gattgattcc cctcctattc tatttttgcc ttttaacaga 2160 cctgtagata taatttactt agaacagtcc tcaggcgatg aagttctcaa tgaaatgaaa 2220 attatatcat tcgaggttaa agggtttact gcatacgtgt tgcctgaaaa tctaaacact 2280 acaatgaaca ttgtgggcaa gttactaaac tatgagtctg aattggagct agtttaccaa 2340 acgaatgatg tcatttctga catgatgaat aatttcgaca agagattatc tgatttggag 2400 aagttttgtg attttctgga taaaagttac ataaaaaaag ccggaagctc gacgtcactt 2460 taccatttgc ttggcgacat ttttactttt gttggagaaa tttgcgtttt gcaatttcca 2520 atcttaggat tttgttttat tcttacaggg atcatggttg atgcattagg aaaaattact 2580 caggaagata ttttcgatgg tatcagtgaa atagcatttg gtggtttatt attgtgttta 2640 ggaaagcgta aaccaaagtt tacttattta gaagaattgg gatttggtcg tcgtagagcc 2700 tcttctaatt catacatcag tgaaatggca tcttcagttg gcagaagaag aagttattcc 2760 agttaccatc actatgaaag tatcagtgat ttaagcccat cattgtctat tagagataga 2820 atcatgaatc aaatacgttc acacaaccct agtgtgtttg atttgcatca taattcagga 2880 ataattttgg agttgaagca aaagcaaaaa gagaattatt cacttctcaa ttctagttat 2940 tctagaatga agcgatctat cagtaatgtc ataaatgatg aagtaataaa ttataaactt 3000 tcttgtgaca accccagttc atgcgaagtt tatgagttgt gtatcaaaac ttttgattat 3060 tatccaatcc ttttggatga caattctttt ttcataatta aaatacaatt taaaatcaaa 3120 atcacatcta atccagttaa aatgaaaatt gaagatattg agagaagtta ttttcatact 3180 tcagatgcct caagatttcg agtctttgat gctgctaaat tcgacgtcat caaacattta 3240 aataagtctt tactgtcttt tacttttaat gagatatcca attatttatg tgtcatcagt 3300 cttctgtcaa aaaccagttc gatagacaat atgttaatcg agaatcatga taaattgtat 3360 gatactttgt acatttcaaa tcataaatcc tacatgtcca gtgaccctat tcatttacgt 3420 caagtagatt tcactatatt taaaacaatg catacttact ctttttcaga tcatgctcct 3480 gatgatagtt atttcaagat gatctcaagc attgttaaac accctgaaat tctgagattt 3540 taatgtactt tgggtcgacg cgactggtga aatctacgaa ctgttggaat ttgacataca 3600 tgggaacagc tatcgtc 3617 //