ID KC134290; SV 1; linear; genomic RNA; STD; VRL; 3812 BP. XX AC KC134290; XX DT 31-JAN-2013 (Rel. 115, Created) DT 22-APR-2015 (Rel. 124, Last updated, Version 2) XX DE Rice black streaked dwarf virus isolate HB-wheat segment S2, complete DE sequence. XX KW . XX OS Rice black streaked dwarf virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus. XX RN [1] RP 1-3812 RX DOI; 10.1016/j.jviromet.2014.10.006. RX PUBMED; 25455902. RA Li S., Wang X., Xu J., Ji Y., Zhou Y.; RT "A simplified method for simultaneous detection of Rice stripe virus and RT Rice black-streaked dwarf virus in insect vector"; RL J. Virol. Methods 211:32-35(2015). XX RN [2] RP 1-3812 RA Li Y., Fan Z.; RT "Complete genomic sequence of Rice black streaked dwarf virus isolated from RT wheat"; RL Unpublished. XX RN [3] RP 1-3812 RA Li Y., Fan Z.; RT ; RL Submitted (02-NOV-2012) to the INSDC. RL Plant Pathology, China Agricultural University, Yuanmingyuan West 2, RL Haidian District, Beijing 100193, China XX DR MD5; 1b7892922c19b06777f666b4ac9e09b8. XX CC Genbank Accession Numbers KC134289-KC134298 represent the complete CC genome of Rice black streaked dwarf virus isolate HB-wheat. CC ##Assembly-Data-START## CC Assembly Method :: DNAMAN v. 6.0 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..3812 FT /organism="Rice black streaked dwarf virus" FT /segment="S2" FT /host="wheat" FT /lab_host="maize" FT /isolate="HB-wheat" FT /mol_type="genomic RNA" FT /country="China:Hebei Province, Baoding" FT /collection_date="20-Mar-2012" FT /db_xref="taxon:10990" FT CDS 46..3726 FT /codon_start=1 FT /product="P2" FT /db_xref="UniProtKB/TrEMBL:L7Q554" FT /protein_id="AFX68407.1" FT /translation="MNSEEKRKKNANQNEDENKEPDKEERQEESKDEKKKNQSETDQTS FT SPDPKLINDQEGITNDSRPEEITYQSGNTIQAKTALTVEAIMNIQGHLKQSDQKLVDEQ FT TSQYLTYLTSNVPAYTTTFGITDCSDFQLVPFYRTIDYTEDTSQQFPSLFCFNTFVNQY FT YDTDMTTFESKRYFEIFKDHPALLRSSETFPVNAYKVSVGWNGNSFAPEITDPTMIGDV FT SLIKNVSYVGVHSSDNYKDRKMFSRLKTFLEIAANCNLVLKGCRTKPLSIEYENTRISK FT KLAGKKILYNDRAHIIFNGIYHAVTPFMNKINDMLMDGNTEIDFEKIYKFGRDVEKRIN FT TYDMICRGYGNMDQFSSYLINLATQRICDNRMTANHYKTLMAANYPNRVSMHVFDTMID FT DLLFVYCPTEEDWKFCMFVIMIDKNIRSLIMNKSLSLMTSRNLFGQNDIGVKLTTLINN FT KNNSPTSREAVTYFMNVLAGGNVESFCQLLTAEMYARFIDFKVENTYVETEYLDILVLL FT EVLFAFLITPRLAWWNSHRFGRTLFNLMYTFCNDEWNKWEGEFGVFVKLQRGAWNKVNI FT SIDHYDLNDLLDGVVFSFLVQRQYTQKQLSDYPFISSIYTLIAPLGEYVNLTRKINAKY FT PFFETVVRGYLPCSAEDYKAASMINDVNTRVNAIGAAVHTVTKNYFSHNTVKTSVKESY FT NTLLNTIRIASNNLGLLMHYTVAPMLKTMYDSFLFVCDGFDKASPWKRPRMISYSGYNV FT LQDTGNQNADLINLLKGKGITVPLTPLHCFSKLYTYIAIGVHGVCRNDTVTTTGSFLSR FT NFYDPNTINILPFDGQEITDLALKIVGHSKRINTVFSIFNYLHKESESDILATVRERLA FT AFWTTSNGRAVLNEITKTFNCPVERYFEHENAFYTMDSDPRVYHPTLYTSDANGNIDPV FT QPATCAVHKKYKYGDEYLENMLKVISHVMFDDELPLFRQVEGLAFGYYSSSTASPTDFF FT NVENDTEYFTINLDETPGVFRTTGTDGFSVQLAFTKDNVNHEYINPLSNAIPKIKFILK FT RLGNMNEHFVIFMKRMIDTKRHMVILTDVVVDYNIVTLSNWKDFKISEENVFDQFVLNR FT DLNNIQLNFYDTRFIIQNRTDELLDRYIYLSYRNITALKDFVVMGGIFGNPNQAINKLT FT DIDKDVYCFGERNGQTSKYFISKRDKIKGSTVNFNNHFTYLGPKSETRLPILDIRVSSQ FT L" XX SQ Sequence 3812 BP; 1275 A; 628 C; 675 G; 1234 T; 0 other; aagtttttta ccggacccta gaattcaccc aagatcaaag acgaaatgaa ttctgaggag 60 aaacgaaaaa agaacgctaa ccaaaacgaa gacgaaaata aagaacccga caaagaagag 120 cgacaagaag aatcgaaaga tgaaaagaag aaaaatcaat ccgaaacaga ccaaacgtca 180 tcacccgacc ccaaacttat aaacgaccaa gaaggtataa ccaatgactc aagacccgaa 240 gaaattactt atcagagtgg taacacaatt caagctaaaa cagccttaac tgttgaagcg 300 ataatgaata ttcaaggaca tctcaaacaa tcagaccaga aattagttga tgaacaaacc 360 agtcaatatc ttacttatct aacttccaat gttcccgctt acacaactac ttttggcatt 420 actgattgtt cagactttca actggtacct ttctatcgaa ccattgacta tactgaagat 480 acgtcacaac aattcccttc attattttgt tttaatactt ttgttaatca atattatgat 540 actgacatga ccactttcga aagtaaaaga tattttgaaa tttttaaaga tcatcctgct 600 ttattaagat caagtgaaac atttcctgtt aatgcctata aagtcagtgt tggatggaat 660 ggaaatagct ttgctcctga gattacagac cccacaatga tcggagatgt atctttaatt 720 aaaaatgttt cttatgttgg tgttcacagt tcagacaatt acaaagatcg aaaaatgttt 780 tctcgactga agactttcct tgaaatagct gctaattgta atttagtttt gaaaggttgt 840 agaactaagc ccttatccat agaatatgaa aatactcgca tatccaaaaa attagctggc 900 aagaagattc tctataatga tcgagcgcat ataatattca atggtattta tcatgctgtt 960 actcccttta tgaataaaat taatgatatg ctaatggatg gtaacacaga aattgatttt 1020 gagaagattt acaaatttgg acgtgacgtt gaaaaaagga ttaacactta cgatatgatc 1080 tgtcgcggct atggtaatat ggaccaattt tcatcttatt taattaatct cgcaacgcag 1140 agaatttgtg ataacagaat gacggccaac cactataaaa ccttgatggc tgcaaattat 1200 ccaaatagag ttagtatgca cgtttttgac accatgattg acgatttatt atttgtgtat 1260 tgtccgaccg aagaagactg gaagttttgc atgtttgtaa ttatgataga taagaacatt 1320 agatcattaa ttatgaataa gtctttgtca ttgatgactt cccgaaattt gtttggccaa 1380 aacgacattg gtgtgaaact tactacattg attaataata agaataatag tcctacatct 1440 cgagaagcag ttacttattt catgaatgtt ttagctggtg gtaatgttga aagtttttgt 1500 caattgttaa cagccgaaat gtacgctaga tttatcgatt tcaaagttga aaacacttat 1560 gttgaaactg aatatttaga cattctagta ttacttgaag ttttatttgc ttttctaatt 1620 actcctcgtt tagcatggtg gaatagtcat agatttggtc gtacgttgtt taatctcatg 1680 tatacctttt gtaatgatga atggaacaaa tgggaaggag aatttggtgt ttttgttaag 1740 ttacaacgtg gagcatggaa caaagttaac atttcaatag accattacga tttaaacgat 1800 ttattagatg gagttgtttt tagctttttg gttcaaagac aatacactca aaaacaattg 1860 tcagattatc cgtttattag ttctatttat accctgattg ctcctttggg agaatacgta 1920 aacttaacta gaaaaattaa cgctaaatat cctttctttg aaactgtagt tcgtggatat 1980 ttgccttgtt cagcagaaga ttataaagca gcgagcatga tcaatgatgt aaatacaaga 2040 gttaacgcta taggagccgc tgttcatacg gtaaccaaga attattttag tcataacaca 2100 gtcaagacct cagtaaagga atcgtataat actttgttga atacaattag aattgcttct 2160 aataatttgg gactcttgat gcattatact gtagcaccta tgttaaaaac gatgtatgat 2220 tcatttttat ttgtttgtga tgggtttgat aaagctagtc cttggaaaag acctcgtatg 2280 atttcctaca gtggctataa tgtactacag gacacaggta atcaaaatgc tgatttgatc 2340 aatttgttga aagggaaagg cattactgtg cctctaactc cgcttcattg ttttagtaaa 2400 ctttacactt atattgctat tggagtacat ggcgtatgtc gaaatgatac cgtgactaca 2460 actggaagtt ttttgtctcg taatttttac gatcctaaca ctattaatat tttaccgttt 2520 gatggacagg aaatcactga tttagcattg aaaattgtag gtcatagtaa aaggattaat 2580 actgtatttt ccatatttaa ctatttacac aaagagagcg agagtgacat tttggcaact 2640 gtgagagaaa gacttgccgc tttctggaca actagcaatg gaagagccgt tctgaatgag 2700 attaccaaaa ctttcaattg tcccgttgaa agatattttg agcatgaaaa tgctttctat 2760 actatggatt ctgatcctcg tgtctatcat cctactttat atacttctga cgctaatggt 2820 aacatcgacc cagttcaacc tgctacatgc gcagttcata agaaatataa gtatggtgat 2880 gagtacttag aaaacatgtt aaaagtaatt tctcacgtta tgtttgatga tgaactcccc 2940 ttattccgtc aagttgaggg attagccttt ggatattaca gttctagcac tgcttcacct 3000 actgattttt tcaatgttga gaacgatacc gagtatttta ctattaatct agatgagact 3060 cctggtgttt ttagaactac aggaactgac ggattcagtg tacaattagc tttcacgaag 3120 gacaatgtga atcatgagta tattaatccc ttatcgaatg ctatccccaa aatcaaattc 3180 atactgaaga gattaggcaa tatgaatgaa cactttgtta tatttatgaa acgaatgatt 3240 gatactaaaa gacacatggt aattctgact gatgtagttg ttgattataa catcgtcacc 3300 ttgtctaatt ggaaagattt caaaatcagt gaagaaaatg tctttgatca gtttgtgtta 3360 aacagagatt tgaacaacat ccaactcaat ttttatgata ctcgtttcat catccagaac 3420 agaactgatg aactgttaga ccgttacatt tatttgagtt atcgtaacat tactgcttta 3480 aaagatttcg ttgtcatggg aggaatattc ggcaatccta atcaagctat caacaagttg 3540 actgatattg acaaagatgt ttattgtttt ggagagagaa acggtcaaac ttcgaaatac 3600 ttcatcagta agagagataa aatcaaaggt agtacagtca acttcaataa tcattttact 3660 taccttggac ctaaatcgga aacgcgtctt ccaattctag atataagagt gtcatcgcag 3720 ttgtaaacac ttttctcctt aagattcgat gtgtctagcc tcttgcggtg ttttttgaag 3780 gtcatccaca accggtaaat tcagctattg tc 3812 //