ID KC121026; SV 1; linear; genomic RNA; STD; VRL; 5723 BP. XX AC KC121026; XX DT 04-FEB-2013 (Rel. 115, Created) DT 04-FEB-2013 (Rel. 115, Last updated, Version 1) XX DE Beet mild yellowing virus isolate EK, complete sequence. XX KW . XX OS Beet mild yellowing virus OC Viruses; Riboviria; Luteoviridae; Polerovirus. XX RN [1] RP 1-5723 RA Klein E., Gilmer D.; RT "Host range and biological properties of a full-length infectious cDNA RT clone of the Beet mild yellowing virus 2ITB isolate"; RL Unpublished. XX RN [2] RP 1-5723 RA Klein E., Gilmer D.; RT ; RL Submitted (31-OCT-2012) to the INSDC. RL Integrative Virology, Institut de Biologie Moleculaire des Plantes - RL Cnrs-Uds, 12 rue du General Zimmer, Strasbourg 67084, France XX DR MD5; de5659e0d73dd93f3c54ce7ff551fd59. DR EuropePMC; PMC4422679; 25946037. XX CC ##Assembly-Data-START## CC Assembly Method :: Mac vector v. 11.1.1 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..5723 FT /organism="Beet mild yellowing virus" FT /host="Beta vulgaris" FT /isolate="EK" FT /mol_type="genomic RNA" FT /country="France" FT /collection_date="03-Oct-2008" FT /db_xref="taxon:156690" FT 5'UTR 1..31 FT CDS 32..751 FT /codon_start=1 FT /product="P0 protein" FT /note="vsr" FT /db_xref="GOA:L7YFD8" FT /db_xref="InterPro:IPR006755" FT /db_xref="UniProtKB/TrEMBL:L7YFD8" FT /protein_id="AGD99098.1" FT /translation="MQFQLKTNSFTCSLNRPLTATERVLNTAYFLTNHLPLVTFENENC FT IRSLLAALPLLLSKQLDPGSFIYAPGKRQSLRLARFYNYCGAVLPSTRNIDLRVPPRKD FT VKRFYLARNSGRDLGERLQRRREIFSRGEAEFKKFLSVWCAESERKLRESPKIDIRMDH FT IIMVLRDMGTLLHRLVLVEELYHRNTYAELAFCVHHLFGEARGMDFWRLANFPGKWFIC FT SHEMYFENSFIQKELRL" FT CDS join(156..1523,1523..3400) FT /codon_start=1 FT /ribosomal_slippage FT /product="P1P2 protein" FT /note="non-structural protein" FT /db_xref="GOA:L7YDI6" FT /db_xref="InterPro:IPR000382" FT /db_xref="InterPro:IPR001795" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="UniProtKB/TrEMBL:L7YDI6" FT /protein_id="AGD99099.1" FT /translation="MKTVFVLFSLLCLCCSVSSSTPGALFTLPGNASLYDWPGSTITAE FT PCYPALATLTYECPPEKTLKDFTLPEIQAEIWGRGYNAAEKFSLAVKQSLKSSFQYGVL FT KARESYGRVLKSILEWTILLWSYAIWALSCTVWYLLKNYTIEILMLSSLFAFTTFLVKL FT VVWIFGGWLTSLVNGLFALTKCILKTLSSRKSYVCERSVKGFLTFTIKQSPPRNCILQI FT QHADGSHAGYATCVTLFDGTNGLLTAQHVVDDFYEGDPRKTLKVVSTRNGNKIPLDEFR FT VTYTSEKRDQLLMHGPPNWEGVLACKAVHMIPASSVAKSKATFFALSDGEWHSSNAELV FT GTSKCGKFISVLSDTKSGHSGTPYFNGKSVLGVHIGSPKEFESENVNYMSPIPRFPGLT FT SPNYIFETTALAGKFFSQEEVEELMEDFSLQEIYSIATARGKYIKYEACPGEETFHDCA FT NRVLPDAGGRKGGSDRRNNRKRKHPREIRRKWKKPSCCSFYTAGTLGENCTASHVHCTS FT KEEYDEWPRCWCQIAGHDCHYRSNLRDKEGSDRQNGFEIDRETSGRDTIVDGHEEAPLK FT RAEKIQEQAKQFGRFFKTQYHWERAAEVCPGFIKVGELPKFYFSKQKGCSDWGTKLTSL FT HPELEEKTRGFGWPKFGPAAELKSLRLQAARWLERAEQVKIPSTEERERVVRKCVEAFS FT PTQTRGPMATRGNKLSWNNFLEDFKTAVFSLELEAGVGVPYVAYGRRTHRGWIEDPDLL FT PVLARFTFDRLQKLSEVKFEHMSPEQLVQEGLCDPIRLFVKGEPHKQSKLDEGRYRLIM FT SVSLVDQLVARVLFQNQNKREIALWRAIPSKPGFGLSTDGQVVDFMQALSAQVGVNTAE FT LLQNWKSHLIPTDCSGFDWSVSDWLLEDEMEVRNRLTLDINDLTRRLRAGWLKCLANSV FT LCLSDGTLLSQQVPGVQKSGSYNTSSSNSRIRVMAAYHSGASWAIAMGDDALESVDADL FT SRYSSLGFKVEVSSQLEFCSHIFEEENLAVPVNKAKMLYKLIHGYEPECGNLEVLTNYL FT AACFSILNELRSDQELVASLYQWLVLPVQPQKI" FT CDS 3598..5610 FT /codon_start=1 FT /transl_except=(pos:4204..4206,aa:OTHER) FT /product="P5 protein" FT /note="minor coat protein readthrough product p3-5" FT /db_xref="GOA:L7YEQ5" FT /db_xref="InterPro:IPR001517" FT /db_xref="InterPro:IPR002929" FT /db_xref="UniProtKB/TrEMBL:L7YEQ5" FT /protein_id="AGD99101.1" FT /translation="MNTVVGRRTINGRRRPRRQTRRAQRSQPVVVVQASRTTQRRPRRR FT RRGNNRTRRTVSTRGTGSSETFVFSKDNLAGSSSGAITFGPSLSDCPAFADGMLKAYHE FT YKISMVILEFVSEASSQNSGSIAYELDPHCKLSALSSTINKFGITKPGRRAFTASYING FT TDWHDVAKDQFRILYKGNGSSSIAGSFRITMKCQFHNPKXVDKEPGPSPGPSPSPQPTP FT SKKYRFIVYTGVPVTRIMAQSTDDAISLYDMPSQRFRYIEDENMNWTNLDSRWYSQNSL FT KAIPMIIVPVPQGEWTVEISMEGYQPTSSTTDPNKDKQDGLIAYNDDLKEGWNVGVYNN FT VEITNNKADNTLKYGHPDMELNSCHFNQGQCLERDGDLTCHVKTTGDNASFFVVGPAVQ FT KQSKYNYAVSYGAWTDRMMEIGMIAIALDEQGSSGSAKIERPKRVGHSMAVSTWETINL FT PEKENSGEFKTDQRQDLKTPPTSGGSSDMPDIVQGGLPLPIEEDIPDFIRDDPWSNIPA FT KTSREDEAASSKSGFKPQLKPPGLPKPQPVRTIRNFDPEPDLVEAWRPDVNPGYSKEDV FT AAATVMYGGSVNEGRSMIDKRDKAVLDGRKSWGSSLASSLTGGTLKASAKSEKLAKLTS FT SERAQFERIKRQQGAARASEFLEQLLAGTNPDPRF" FT CDS 3598..4206 FT /codon_start=1 FT /product="P3 protein" FT /note="major coat protein" FT /db_xref="GOA:B5L2B8" FT /db_xref="InterPro:IPR001517" FT /db_xref="UniProtKB/TrEMBL:B5L2B8" FT /protein_id="AGD99100.1" FT /translation="MNTVVGRRTINGRRRPRRQTRRAQRSQPVVVVQASRTTQRRPRRR FT RRGNNRTRRTVSTRGTGSSETFVFSKDNLAGSSSGAITFGPSLSDCPAFADGMLKAYHE FT YKISMVILEFVSEASSQNSGSIAYELDPHCKLSALSSTINKFGITKPGRRAFTASYING FT TDWHDVAKDQFRILYKGNGSSSIAGSFRITMKCQFHNPK" FT CDS 3629..4156 FT /codon_start=1 FT /product="P4 protein" FT /note="putative movement protein" FT /db_xref="InterPro:IPR001964" FT /db_xref="UniProtKB/TrEMBL:L7Y9D1" FT /protein_id="AGD99102.1" FT /translation="MEEDDHVGKHDALSALSQWLWSKPLGQHNADLDDDEEATTGQEEL FT FLPEEQVRARHSFSQKTISREVPAEQSRSGRVYQTARHSLMECSRPTMSIKSQWSFWSS FT SPRPLPKIPVPSLTSWTHTVNSVPFHQPLTSSGSQNPAGGHLQRPTSTGRTGMTLPRTN FT SGSSTKAMVLHR" FT 3'UTR 5611..5723 XX SQ Sequence 5723 BP; 1613 A; 1385 C; 1363 G; 1362 T; 0 other; acaaaagaaa ccagcgagga tctagcagtc tatgcaattt cagcttaaaa caaacagttt 60 cacttgttcg ttgaaccgac cgctaacagc tacagagcga gttttaaaca ccgcgtattt 120 tcttacgaat catttaccgc tcgtaacttt tgagaatgaa aactgtattc gttctcttct 180 cgctgctctg cctttgctgc tcagtaagca gctcgacccc gggagcttta tttacgctcc 240 cgggaaacgc cagtctttac gactggccag gttctacaat tactgcggag ccgtgttacc 300 cagcactcgc aacattgact tacgagtgcc ccccagaaaa gacgttaaaa gattttacct 360 tgcccgaaat tcaggcagag atctggggga gaggctacaa cgccgcagag aaattttctc 420 tcgcggtgaa gcagagttta aaaagttcct ttcagtatgg tgtgctgaaa gcgagagaaa 480 gctacgggag agtcctaaaa tcgatattag aatggaccat attattatgg tcttacgcga 540 tatgggcact ctcttgcacc gtctggtact tgttgaagaa ctataccata gaaatactta 600 tgctgagctc gctttttgcg ttcaccacct ttttggtgaa gctcgtggta tggatttttg 660 gcggttggct aacttccctg gtaaatggtt tatttgctct cacgaaatgt attttgaaaa 720 ctctttcatc cagaaagagc tacgtttgtg aacgatctgt aaaaggtttt ctcaccttta 780 ccatcaaaca aagcccgccg cgtaattgca ttcttcaaat acaacacgca gacggttccc 840 atgccggtta tgcaacatgc gtaaccttat tcgacgggac aaacggattg ttgactgcgc 900 aacatgtagt tgacgatttt tacgaaggag acccgagaaa gactctaaaa gtcgtctcca 960 cccgcaatgg aaacaaaatc ccccttgatg aattcagagt gacgtacaca tctgagaaaa 1020 gggatcagtt gttgatgcat gggcccccaa actgggaagg agttcttgcc tgcaaggcag 1080 ttcacatgat tccggcatcg agtgttgcaa aatcgaaagc aactttcttt gctctgtcgg 1140 atggtgaatg gcattcctct aatgccgagc tcgttggcac atccaagtgc ggaaaattca 1200 tttctgtact cagtgacaca aagagtggtc attcgggcac tccctatttc aatggtaaga 1260 gtgttcttgg agttcacata ggctccccga aagaatttga gtcggaaaat gttaactaca 1320 tgtctcctat accacgtttt cctggattaa ccagcccgaa ctacatattt gaaaccacag 1380 cccttgctgg aaaatttttc agccaagagg aagtcgaaga gctaatggaa gacttctctc 1440 tccaagagat ttattccata gcgacggcac gtgggaagta cataaaatat gaggcttgtc 1500 caggtgaaga gacattccat gatgtgctaa cagagtcctc cccgatgcag ggggaaggaa 1560 gggcggctcc gaccgccgga acaaccggaa acgtaagcac ccacgagaga tccgcaggaa 1620 atggaaaaag ccctcgtgct gctccttcta caccgcggga acccttggtg aaaactgcac 1680 cgcaagccac gtacattgta cctcaaaaga ggaatatgac gaatggccga gatgctggtg 1740 ccaaatcgca ggccacgact gccactaccg atcaaatctc agagataaag aaggctctga 1800 tagacaaaat ggatttgaaa tcgatcgaga gacaagtggt agagacacta tcgtcgatgg 1860 ccatgaagaa gccccgctca agagggcgga gaagatccaa gaacaagcaa aacaatttgg 1920 acgcttcttc aaaacccagt accactggga aagagccgca gaggtctgcc ccggtttcat 1980 caaagtcggt gagctcccca agttttactt ctctaaacaa aaaggatgct cggattgggg 2040 cacgaagctc accagcctcc acccagaatt ggaggagaaa acccgaggct tcgggtggcc 2100 caagttcggg ccagcggcgg aactgaaatc tttgcggcta caagccgcaa gatggctcga 2160 acgcgccgag caagttaaaa tcccttcaac tgaggaaagg gagcgcgtcg tgaggaaatg 2220 tgtggaagca ttctcgccca ctcaaacacg aggtcccatg gccacgagag gaaacaaact 2280 gtcttggaac aatttccttg aagattttaa aacggcagtt ttctctctcg agctcgaagc 2340 cggcgtaggc gtcccgtatg ttgcttacgg tcgacgcacg cacagaggct ggattgaaga 2400 cccagatctg ttgccggttt tagctcgttt taccttcgat cgattacaga agttatcgga 2460 ggtgaaattt gagcatatga gccctgaaca attggttcag gaaggtctgt gtgacccaat 2520 acggttattc gtaaaaggcg agccacacaa acaatccaaa cttgatgaag gacgctaccg 2580 cctcatcatg agtgtctcat tggttgatca actggtagcc cgggttctgt ttcaaaatca 2640 gaacaagcgc gagatcgcgc tttggagggc gattccctca aaacccggat tcggattgtc 2700 cacagacgga caagtcgtcg atttcatgca agcattatcg gcgcaggtgg gagtgaacac 2760 tgctgaatta ctccaaaatt ggaaatccca ccttattcct acagattgct ctggttttga 2820 ctggagcgtt tcggactggc ttctagagga tgaaatggaa gtccggaaca ggctcacgtt 2880 ggacataaat gatctaacca ggcgtctgcg agctggatgg cttaaatgcc tcgcaaatag 2940 tgttctctgt ctatcagatg gaacattgct ctcgcagcaa gtgcctggtg tacaaaagag 3000 tggcagctac aacacctcct cgtctaactc tagaattcga gtgatggccg cttaccactc 3060 cggagcctcc tgggccatcg ccatgggtga tgatgccctt gaatctgtag atgcagacct 3120 aagtcgatac tcatccttag gcttcaaagt cgaggtttct tcacaactgg aattctgctc 3180 tcacattttt gaggaggaga acctcgccgt tccggtaaac aaagctaaaa tgctttataa 3240 attgatacat ggttatgaac cggaatgtgg caaccttgaa gttctgacga actatcttgc 3300 agcttgtttt tcaattttaa acgagctgag atccgatcaa gaactcgttg cctccctcta 3360 tcagtggctg gtccttccag tgcagccaca aaagatataa cgagggacaa tataaacagc 3420 cgggtaaaca tcagttgcaa acgccggaag tttaaagtct gattacataa caagccaaaa 3480 tagatttcaa gtttttagca ggattttcaa gtggtctatt gtcagcaata cctgtaacgg 3540 tagttggctt gtatttcgtc taccttaaga tttctcacca cgtcagatca attgttaatg 3600 aatacggtcg tgggtaggag aacgatcaat ggaagaagac gaccacgtag gcaaacacga 3660 cgcgctcagc gctctcagcc agtggttgtg gtccaagcct ctcggacaac acaacgccga 3720 cctagacgac gacgaagagg caacaaccgg acaagaagaa ctgtttctac cagaggaaca 3780 ggttcgagcg agacattcgt tttctcaaaa gacaatctcg cgggaagttc cagcggagca 3840 atcacgttcg ggccgagtct atcagactgc ccggcattcg ctgatggaat gctcaaggcc 3900 taccatgagt ataaaatctc aatggtcatt ttggagttcg tctccgaggc ctcttcccaa 3960 aattccggtt ccatcgctta cgagctggac ccacactgta aactcagtgc cctttcatca 4020 accattaaca agttcgggat cacaaaaccc ggcaggaggg catttacagc gtcctacatc 4080 aacgggacgg actggcatga cgttgccaag gaccaattca ggatcctcta caaaggcaat 4140 ggttcttcat cgatagctgg ttcttttaga atcaccatga agtgccagtt ccacaatccc 4200 aaataggtag acaaggaacc cggccctagc ccagggcctt ctccctctcc acaacccaca 4260 ccctcaaaga aatatcgttt tatcgtctat actggtgtcc ctgtgacccg tataatggcc 4320 caatccactg atgacgccat ctctctgtac gacatgcctt cccaacggtt tcgctacata 4380 gaagacgaga atatgaactg gacaaacctc gattctcgat ggtattccca gaattctttg 4440 aaagccatcc caatgataat agtaccagtc cctcaaggtg agtggactgt ggaaatttcg 4500 atggaggggt atcaaccaac ctcaagcacc acagatccta ataaggataa acaagatggt 4560 cttattgcat ataatgatga cctcaaggag ggttggaatg taggggttta taacaatgtg 4620 gagataacca acaataaggc tgataacact ttgaagtacg gccatccaga catggagctc 4680 aatagttgtc attttaatca aggacaatgt ttggaaagag atggagattt gacttgtcac 4740 gttaaaacaa ctggtgacaa tgcctccttc tttgttgttg gtcccgctgt ccagaagcaa 4800 tccaaataca attatgccgt ttcatacgga gcctggacag atcggatgat ggagataggg 4860 atgatagcca tagcacttga tgaacaaggc tcatccggtt ccgcaaagat agaaagacca 4920 aagagagtcg ggcactccat ggcagtctca acctgggaga ctataaactt accggagaag 4980 gaaaactccg gtgaattcaa aaccgatcaa agacaagatc tcaaaactcc tcccacatct 5040 ggtgggagtt ccgatatgcc ggatatcgtt caaggaggct taccccttcc cattgaagaa 5100 gacattcctg atttcatcag ggatgaccct tggtccaaca taccggccaa gacttcgcgg 5160 gaagacgagg ctgcgtcatc aaagagtggt tttaaacccc aattgaagcc tcctggcttg 5220 ccaaagccac aaccggtcag aacgatccga aacttcgatc cagaacctga cttggttgag 5280 gcatggcgac ctgacgtgaa ccccggatat tccaaggaag acgtggcagc ggccactgtt 5340 atgtacgggg gttccgttaa tgaaggccgg tctatgattg acaagcgtga taaagctgtg 5400 ttagacggcc gcaagagttg gggttcttcc ttggcgtcct ccttgacggg gggcacgctt 5460 aaggcctctg caaagtcaga gaagcttgcc aaactcactt cgagtgaaag ggcgcaattc 5520 gaacgaatta agcgccagca aggtgccgca cgagcttcag aatttttaga acaacttctg 5580 gctggcacaa accctgaccc aaggttctga tgaacctttc ccaatcatca cagtcaagcc 5640 cgtgacttta aacgcggaac gactccgaaa ggataggcaa cgagtgtttt acgctgggat 5700 aactccctac ggcacttcgg tgt 5723 //