ID   KC113507; SV 1; linear; genomic RNA; STD; VRL; 1248 BP.
XX
AC   KC113507;
XX
DT   03-FEB-2013 (Rel. 115, Created)
DT   03-FEB-2013 (Rel. 115, Last updated, Version 1)
XX
DE   Bermuda grass southern mosaic virus isolate Darab polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Bermuda grass southern mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus; unclassified Potyvirus.
XX
RN   [1]
RP   1-1248
RA   Masumi M., Farahbakhsh F., Afsharifar A., Izadpanah K.;
RT   "Genetic variation of Bermuda grass southern mosaic virus isolates based on
RT   sequence of 3' region of genome";
RL   Iran. J. Plant Pathol. 49:0(2013).
XX
RN   [2]
RP   1-1248
RA   Farahbakhsh F., Masumi M., Afsharifar A., Izadpanah K.;
RT   ;
RL   Submitted (31-OCT-2012) to the INSDC.
RL   Plant Virology Research Center, Collage of Agriculture, Shiraz-Isfahan
RL   Road, Km15, Shiraz, Fars 71441-65186, Iran
XX
DR   MD5; 60c590f2f786e14f7d068c5e91627bc3.
XX
CC   ##Assembly-Data-START##
CC   Assembly Method       :: Vector NTI v. 9.0
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1248
FT                   /organism="Bermuda grass southern mosaic virus"
FT                   /host="Bermuda grass"
FT                   /isolate="Darab"
FT                   /mol_type="genomic RNA"
FT                   /country="Iran"
FT                   /collection_date="2009"
FT                   /PCR_primers="fwd_name: bjpf1_forward, fwd_seq:
FT                   gatcttccagattatttggctgayg, rev_name: bjpr1b_reverse,
FT                   rev_seq: cggttaagtttcgctgaagtcc"
FT                   /db_xref="taxon:1285466"
FT   CDS             <1..1014
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains coat protein and NIb protein"
FT                   /db_xref="GOA:L7XCJ9"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:L7XCJ9"
FT                   /protein_id="AGD80069.1"
FT                   /translation="DLPDYLADEVIDVKHQAGENVDAGQETEAQKEAKKKAAEEKRARE
FT                   AEAKRKQEAETKQKADEEARERQRTKEAADKKKAEDEAKKKAAEKASGSGTTEKDKDVD
FT                   AGTLGSMTVPKLKAMSKKMRLPQAKGKNILHLDFLLQYKPQQQDLSNTRATKAEFDRWY
FT                   EAVQKEYELDDTQMTVVMSGLMVWCIENGCSPNINGVWTMMDGDEQRTFPLKPVIENAS
FT                   PTFRQIMHHFSDAAEAYIEYRNSTEKYMPRYGLQRNLTDFSLARYAFDFYEMSSRTPAR
FT                   AKEAHMQMKAAAVRGSNTRMFGLDGNVGETQENTERHTAGDVSRNMHSLLGVQQGH"
XX
SQ   Sequence 1248 BP; 436 A; 227 C; 301 G; 284 T; 0 other;
     gatcttccag attatttggc tgatgaagtt atagatgtca aacatcaagc tggcgaaaat        60
     gttgatgctg gacaagaaac tgaagcacaa aaggaggcaa agaagaaagc agctgaggaa       120
     aagagagcaa gagaagccga agcaaagcga aagcaggaag ccgaaacaaa gcaaaaggca       180
     gatgaggagg ctagagaaag acaaagaact aaagaagcag ctgacaagaa gaaggccgaa       240
     gatgaagcta agaagaaagc tgctgaaaaa gctagtggaa gcggaactac agaaaaagat       300
     aaagatgtgg atgctggaac tttaggttca atgacggtgc ccaaacttaa agccatgtct       360
     aaaaagatgc gtttaccgca ggcaaaagga aagaacattc tacatcttga tttcctcttg       420
     caatataaac cacaacaaca agatttatca aacacacgag caaccaaggc tgaatttgat       480
     agatggtacg aagcagtgca gaaagaatac gaacttgatg atacacaaat gacagttgtc       540
     atgagtggat tgatggtttg gtgcattgaa aatggttgct cgccgaacat caatggtgtc       600
     tggactatga tggacggaga tgaacagaga acatttcctt taaaaccagt tattgaaaat       660
     gcatctccaa cttttagaca aattatgcac cactttagtg atgcagctga agcatatatt       720
     gagtatagaa attcgacaga gaagtacatg ccaagatacg gacttcagcg aaatttaacc       780
     gactttagcc ttgcacgata tgcatttgat ttttacgaga tgtcatctcg aactccagca       840
     cgtgcaaagg aagcccacat gcagatgaag gctgcagcag ttcgtggttc aaatacacga       900
     atgtttggtc ttgatgggaa tgtcggagag acccaagaaa acactgaacg ccatacagct       960
     ggtgatgtca gtcgcaacat gcactccctt ctgggagtcc agcaaggaca ctgaaatggg      1020
     gtcgaacttt tacgcagtaa tttagtaata tataaataaa ctattgtggt gaggttctac      1080
     ctcgttagtt ttatctatat attatgctat gtacctacta tgtctgcaag tgagtgaggt      1140
     tacacctcga cacttatagt gggcactatt actagcttcg aatcacgaga cggacgatcc      1200
     attgagtggt tccaccacga ggatgcagcg agtttcgtgg tacgagac                   1248
//