ID   KC113504; SV 1; linear; genomic RNA; STD; VRL; 1281 BP.
XX
AC   KC113504;
XX
DT   03-FEB-2013 (Rel. 115, Created)
DT   03-FEB-2013 (Rel. 115, Last updated, Version 1)
XX
DE   Bermuda grass southern mosaic virus isolate Jiroft polyprotein gene,
DE   partial cds.
XX
KW   .
XX
OS   Bermuda grass southern mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus; unclassified Potyvirus.
XX
RN   [1]
RP   1-1281
RA   Masumi M., Farahbakhsh F., Afsharifar A., Izadpanah K.;
RT   "Genetic variation of Bermuda grass southern mosaic virus isolates based on
RT   sequence of 3' region of genome";
RL   Iran. J. Plant Pathol. 49:0(2013).
XX
RN   [2]
RP   1-1281
RA   Masumi M., Farahbakhsh F., Afsharifar A., Izadpanah K.;
RT   ;
RL   Submitted (31-OCT-2012) to the INSDC.
RL   Plant Virology Research Center, Collage of Agriculture, Shiraz-Isfahan
RL   Road, Km15, Shiraz, Fars 71441-65186, Iran
XX
DR   MD5; bb49db071d05dadcb08e041550281a3f.
XX
CC   ##Assembly-Data-START##
CC   Assembly Method       :: Vector NTI v. 9.0
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1281
FT                   /organism="Bermuda grass southern mosaic virus"
FT                   /host="Bermuda grass"
FT                   /isolate="Jiroft"
FT                   /mol_type="genomic RNA"
FT                   /country="Iran"
FT                   /collection_date="1995"
FT                   /PCR_primers="fwd_name: bjpf1_forward, fwd_seq:
FT                   gatcttccagattatttggctgayg, rev_name: bjpr2_reverse,
FT                   rev_seq: gtgctggagtgcgagatgac"
FT                   /db_xref="taxon:1285466"
FT   CDS             <1..1047
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains coat protein and NIb protein"
FT                   /db_xref="GOA:L7X8E6"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:L7X8E6"
FT                   /protein_id="AGD80072.1"
FT                   /translation="ELNVYARQFFNDLPDYLADEVIDVKHQAGENVDAGQETEAQKEAK
FT                   KKAAEEKKARETEAKRKQEAETKQKADEEARERQRVKEAADKKKAEDDAKKKAAEKPSG
FT                   SGSAEKDKDVDAGTLGSMTVPKLKAMSKKMRLPQAKGKNILHLDFLLQYKPQQQDLSNT
FT                   RATKAEFDRWYEAVQKEYELDDTQMTVVMSGLMVWCIENGCSPNINGVWTMMDGDEQRT
FT                   FPLKPVIENASPTFRQIMHHFSDAAEAYIEYRNSTEKYMPRYGLQRNLTDFSLARYAFD
FT                   FYEMSSRTPARAKEAHMQMKAAAVRGSNTRMFGLDGNVGETQENTERHTAGDVSRNMHS
FT                   LLGVQQGH"
XX
SQ   Sequence 1281 BP; 434 A; 239 C; 314 G; 294 T; 0 other;
     gagttgaatg tttatgcacg acaattcttc aacgatcttc cagattattt ggctgacgag        60
     gttatagatg ttaaacatca agctggtgag aatgttgatg ctggacagga aactgaagca       120
     cagaaagaag caaagaagaa agcggctgaa gagaagaaag caagagaaac tgaagcaaaa       180
     cgaaagcaag aggctgaaac aaagcaaaag gcagatgaag aagccagaga aagacaaaga       240
     gtcaaggaag cagctgacaa aaagaaggct gaagatgatg ctaagaagaa agctgctgag       300
     aagcccagtg ggagtggatc cgcagaaaag gacaaagacg tggatgctgg aactttgggt       360
     tcaatgacgg tacctaagct taaagctatg tccaaaaaga tgcgtttgcc acaggcaaaa       420
     ggaaagaaca ttctccatct tgactttctc ttgcaataca aaccacaaca acaagattta       480
     tcaaacacac gagcaaccaa ggctgaattt gatagatggt atgaagcagt gcagaaagaa       540
     tacgaacttg atgatacaca aatgacagtt gtcatgagtg gattaatggt ttggtgtatt       600
     gaaaatggtt gctcaccgaa catcaatggt gtctggacta tgatggacgg agatgaacag       660
     agaacatttc ctttaaaacc agttattgaa aatgcatctc caactttcag acaaattatg       720
     caccacttta gtgatgcagc tgaagcatac atcgagtaca gaaactcgac agagaagtat       780
     atgccaagat atggacttca gcgaaactta accgacttta gccttgcacg ctatgcattt       840
     gatttttacg agatgtcatc tcgcactcca gcacgtgcaa aggaagccca tatgcagatg       900
     aaggccgcag cagttcgtgg ttcaaacaca cgaatgttcg gtcttgatgg gaatgtcgga       960
     gagacccaag aaaatactga acgccacaca gctggcgatg ttagtcgcaa catgcactcc      1020
     ctcctgggag ttcagcaggg acactgaaac ggggtcgaac ttttacgcag taatttagta      1080
     atacataaat aaactattgt ggtgaggttc tacctcgtta gttttattta tatattatgc      1140
     tatgtaccta ctatgtctgc aagtgagtga ggttgtacct cgacacttat agtgggcgct      1200
     attactagct tcgaatcacg agacggacga tccattgagt ggttctacca cgaggatgca      1260
     gcgagtttcg tggtgggaga c                                                1281
//