ID   KC107758; SV 1; linear; genomic RNA; STD; VRL; 1283 BP.
XX
AC   KC107758;
XX
DT   29-JAN-2013 (Rel. 115, Created)
DT   29-JAN-2013 (Rel. 115, Last updated, Version 1)
XX
DE   Bermuda grass southern mosaic virus isolate Behbahan polyprotein gene,
DE   partial cds.
XX
KW   .
XX
OS   Bermuda grass southern mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus; unclassified Potyvirus.
XX
RN   [1]
RP   1-1283
RA   Masumi M., Farahbakhsh F., Afsharifar A., Izadpanah K.;
RT   "Genetic variation of Bermuda grass southern mosaic virus isolates based on
RT   sequence of 3' region of genome";
RL   Iran. J. Plant Pathol. 49:0(2012).
XX
RN   [2]
RP   1-1283
RA   Masumi M., Farahbakhsh F., Afsharifar A., Izadpanah K.;
RT   ;
RL   Submitted (31-OCT-2012) to the INSDC.
RL   Plant Virology Research Center, Collage of Agriculture, Shiraz-Isfahan
RL   Road, Km15, Shiraz, Fars 71441-65186, Iran
XX
DR   MD5; 6973982135c0fb84b85cf02dba0128b5.
XX
CC   ##Assembly-Data-START##
CC   Assembly Method       :: Vector NTI v. 9.0
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1283
FT                   /organism="Bermuda grass southern mosaic virus"
FT                   /host="Cynodon dactylon"
FT                   /isolate="Behbahan"
FT                   /mol_type="genomic RNA"
FT                   /country="Iran:Behbahan"
FT                   /collection_date="2003"
FT                   /PCR_primers="fwd_name: bjpf1_forward, fwd_seq:
FT                   gatcttccagattatttggctgayg, rev_name: bjpr1b_reverse,
FT                   rev_seq: cggttaagtttcgctgaagtcc"
FT                   /db_xref="taxon:1285466"
FT   CDS             <1..1050
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains coat protein and NIb protein"
FT                   /db_xref="GOA:L7X224"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:L7X224"
FT                   /protein_id="AGC94745.1"
FT                   /translation="DELNVYARQFFTDLPDYLADEVIDVKHQAGENVDAGQETEAQKEA
FT                   KKKAAEEKKARETEAKRKQEAETKQKADEEARERQRVKEAADKKKAEDDAKKKAAEKPS
FT                   GSGSAEKDKDVDAGTLGSMTVPKLKAMSKKMRLPQAKGKNILHLDFLLQYKPQQQDLSN
FT                   TRATKAEFDRWYEAVQKEYELDDTQMTVVMSGLMVWCIENGCSPNINGVWTMMDGDEQR
FT                   TFPLKPVIENASPTFRQIMHHFSDAAEAYIEYRNSTEKYMPRYGLQRNLTDFSLARYAF
FT                   DFYEMSSRTPARAKEAHMQMKAAAVRGSNTRMFGLDGNVGETQENTERHTAGDVSRNMH
FT                   SLLGVQQGH"
XX
SQ   Sequence 1283 BP; 436 A; 240 C; 312 G; 295 T; 0 other;
     gatgagttga atgtttatgc acgacaattt ttcactgatc ttccagatta tttggctgac        60
     gaggttatag atgttaaaca tcaagctggt gagaatgttg atgctggaca ggaaactgaa       120
     gcacagaaag aagcaaagaa gaaagcggct gaagagaaga aagcaagaga aactgaagca       180
     aaacgaaagc aagaggctga aacaaagcaa aaggcagatg aagaagccag agaaagacaa       240
     agagtcaagg aagcagctga caaaaagaag gctgaagatg atgctaagaa gaaagctgct       300
     gagaagccca gtgggagtgg atccgcagaa aaggacaaag acgtggatgc tggaactttg       360
     ggttcaatga cggtacctaa gcttaaagct atgtccaaaa agatgcgttt gccacaggca       420
     aaaggaaaga acattctcca tcttgacttt ctcttgcaat acaaaccaca acaacaagat       480
     ttatcaaaca cacgagcaac caaggctgaa tttgatagat ggtacgaagc agtgcagaaa       540
     gaatacgaac ttgatgatac acaaatgaca gttgtcatga gtggattaat ggtttggtgt       600
     attgaaaatg gttgctcacc gaacatcaat ggtgtctgga ctatgatgga cggagatgaa       660
     cagagaacat ttcctttaaa accagttatt gaaaatgcat ctccaacttt cagacaaatt       720
     atgcaccact ttagtgatgc agctgaagca tacatcgagt acagaaactc gacagagaag       780
     tatatgccaa gatatggact tcagcgaaac ttaaccgact ttagccttgc acgctatgca       840
     tttgattttt acgagatgtc atctcgaact ccagcacgtg caaaggaagc ccacatgcag       900
     atgaaggccg cagcagttcg tggttcaaac acacgaatgt tcggtcttga tgggaatgtc       960
     ggagagaccc aagaaaacac tgaacgccac acagctggcg atgtcagtcg caacatgcac      1020
     tccctcctgg gagttcagca aggacactga agcggggtcg aacttttacg cagtaattta      1080
     gtaatacata aataaactat tgtggtgagg ttctacctcg ttagttttat ttatatatta      1140
     tgctatgtac ctactatgtc tgcaagtgag tgaggttaca cctcgacact tatagtgggc      1200
     actattacta gcttcgaatc acgagacggt ctatctattg agtggttcta ccacgaggat      1260
     gcagcgagtt tcgtggtgag agg                                              1283
//