ID KC019306; SV 1; circular; genomic DNA; STD; VRL; 2735 BP. XX AC KC019306; XX DT 19-FEB-2013 (Rel. 115, Created) DT 19-FEB-2013 (Rel. 115, Last updated, Version 1) XX DE Horsegram yellow mosaic virus isolate India:Banglore:French bean:2011 DE segment DNA-A, complete sequence. XX KW . XX OS Horsegram yellow mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2735 RA Bhatt B.S., Singh R.P., Kale R.K., Singh A.K.; RT "Molecular Characterization of Bean Dwarf Mosaic Virus"; RL Unpublished. XX RN [2] RP 1-2735 RA Bhatt B.S., Singh R.P., Kale R.K., Singh A.K.; RT ; RL Submitted (29-OCT-2012) to the INSDC. RL School of Life Sciences, Central University of Gujarat, Sector-30, RL Gandhinagar, Gujarat 382030, India XX DR MD5; 376b4fdaa47206d170d8d9d57efa8119. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2735 FT /organism="Horsegram yellow mosaic virus" FT /segment="DNA-A" FT /host="Phaseolus vulgaris" FT /isolate="India:Banglore:French bean:2011" FT /mol_type="genomic DNA" FT /country="India" FT /isolation_source="leaf" FT /collection_date="2011" FT /clone="15" FT /db_xref="taxon:263793" FT gene 145..495 FT /gene="AV2" FT CDS 145..495 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:M1KE60" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:M1KE60" FT /protein_id="AGF33905.1" FT /translation="MWDPLLNDFPKTVHGFRCMLAIKYLQQVQENYSTNSVGFLYITEL FT IQVLRIRKHAKAELRYRLLYPGIQCSSETDLRHPPGATCFCGKCSCQREKTSVDQPSHV FT EETEILSVVSFS" FT gene 305..1078 FT /gene="AV1" FT CDS 305..1078 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /note="role in encapsidation of virus particles" FT /db_xref="GOA:B7ZFQ3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:B7ZFQ3" FT /protein_id="AGF33906.1" FT /translation="MPKRNYDTAFSTPGSSVRRRLTYDTPLALPASAGSAPASVRRRRW FT TNRPMWRKPRFYRLYRSPDVPRGCEGPCKVQSFEARHDISHVGKVICVTDVTRGSGLTH FT RVGKRFCVKSIFITGKIWMDENIKTKNHTNTVMFKLVRDRRPFGTPQDFGQVFNMYDNE FT PSTATVKNDLRDRYQVVRKFHATVTGGQYACKEQAIISRFYRVNNHVVYNHQEAAKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSISN" FT gene complement(1075..1479) FT /gene="AC3" FT CDS complement(1075..1479) FT /codon_start=1 FT /gene="AC3" FT /product="REn protein" FT /note="replication enhancer protein" FT /db_xref="GOA:M1LGE2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:M1LGE2" FT /protein_id="AGF33907.1" FT /translation="MDFRTGDNITAAQLRNGVYIWEVRNPLSFKILQHRPMGAGSRMIV FT TQIRLMFNHGLKKALQMHKCFLDLKLYHYMTATSGMILSIFRNQLFRYINNLGVISLGN FT VLNGASHILYEKLHQVEDVSFTHNVQYKLY" FT gene complement(1220..1627) FT /gene="AC2" FT CDS complement(1220..1627) FT /codon_start=1 FT /gene="AC2" FT /product="TrAP protein" FT /note="transcription activator protein" FT /db_xref="GOA:B7ZFQ5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B7ZFQ5" FT /protein_id="AGF33908.1" FT /translation="MRNSTPSKNHSSPPSIKAQHRVAKKRAIRRSRIDLTCGCSYYIHI FT NCRNYGFSHRGQHHCSSTQEWRLYLGGAKSPLFQDPSTSSNGSRVPNDRDPNPPNVQPR FT TEESIADAQMLPRPEAVPLYDGDFWDDIINF" FT gene complement(1527..2615) FT /gene="AC1" FT CDS complement(1527..2615) FT /codon_start=1 FT /gene="AC1" FT /product="Rep protein" FT /note="replication initiator protein" FT /db_xref="GOA:M1KZQ0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:M1KZQ0" FT /protein_id="AGF33909.1" FT /translation="MPRERRFAINAKNYFLTYPRCPLTKEDTLEQLLALSTPVNKRFIR FT ICRELHENGEPHLHVLLQFEGKFHTRNQRFFDLVSSTRSTHFHPNIQAAQSCSDVKQYM FT EKDGDVLDHGTFQIDGRSARGGKQSANDAYAEALNCGSKSQALDILKEKAPKDYILQFH FT NLNCNLTKIFISPIQAYVSPYSIDTFNRVPEYISSWASENVRDPAARPERPISIVIEGD FT SRTGKTMWARALGPHNYLCGHLDLNDKIFSNEAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNVKYGKPTHIKGGIPTIFLCNPGPKSSYKEYLDEADNASLKVWASKNAEFYTLKEPL FT FSSVDQSATQGCQEASNSTLSN" FT gene complement(2165..2458) FT /gene="AC4" FT CDS complement(2165..2458) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:M1KE67" FT /protein_id="AGF33910.1" FT /translation="MENLISMFCCNSKANSTHVTKGSSTWYPQPGQHISIRTFRQLKAA FT QMLSNTWRKTETSLIMEPSKSMEDRLEEVNSLPTTRMPRHSTVDPNHRPSIY" XX SQ Sequence 2735 BP; 701 A; 579 C; 621 G; 834 T; 0 other; acctgagtgc cccgcgatcg gttacactct gcttttgctt ttggaccgct ttacttttag 60 tcgttcaatg agaagcgctc ttcagcacta cgataattca aatttgaatt ataaagctaa 120 tggccacgtt gcatcgcatt aaccatgtgg gatccattgt tgaacgactt tcccaaaaca 180 gtgcatggtt tccgatgtat gcttgcaatt aagtacttgc agcaagttca agagaattat 240 tccactaatt ctgttggttt tttgtatatc acagagctaa tacaggtatt acgcattcgg 300 aaacatgcca aagcggaact acgataccgc cttctctacc ccgggatcca gtgttcgtcg 360 gagactgact tacgacaccc ccctggcgct acctgcttct gcgggaagtg ctcctgccag 420 cgtgagaaga cgtcggtgga ccaaccgtcc catgtggagg aaaccgagat tttatcggtt 480 gtatcgttct cctgatgtcc cacgtggttg tgaaggaccg tgtaaggtcc aatcatttga 540 ggcgagacat gacatctcgc atgtgggcaa agtcatttgt gtcacggatg tgactcgtgg 600 tagtggtctc actcatcgtg tcggtaaacg attttgtgtt aagtccatct tcattacggg 660 aaagatttgg atggacgaaa acatcaagac caagaatcac actaacactg tgatgttcaa 720 attggttcgt gataggcgtc cttttggaac gccccaggac tttggtcaag ttttcaacat 780 gtatgataat gaacccagta ctgccactgt gaagaacgat cttcgtgatc gttatcaggt 840 cgtgcgtaag tttcatgcca ccgtgactgg tggccagtat gcgtgcaagg agcaagctat 900 aattagccga ttttatcgtg ttaataatca tgttgtttac aaccatcagg aagctgcgaa 960 gtatgacaat catactgaga acgctttgtt attgtatatg gcatgtactc atgcttctaa 1020 tcctgtgtat gcaactctta agattcggat ctatttttat gattcgatat caaattaata 1080 aagcttgtat tgaacattat gcgtaaagct tacatcctcc acctggtgga gtttttcata 1140 caggatatgt gatgcgccat ttaatacatt gcctaagcta atgacgccta aattatttat 1200 atatctaaat aattggttcc taaaaattga taatatcatc ccagaagtcg ccgtcatata 1260 gtggtacagc ttcaggtcga ggaagcattt gtgcatctgc aatgctttct tcagtccgtg 1320 gttgaacatt aggcggattt gggtcacgat cattcgggac cctgctccca ttggacgatg 1380 ttgaaggatc ttgaaagaga ggggatttcg cacctcccag atatagacgc cattcctgag 1440 ttgagctgca gtgatgttgt ccccggtgcg aaaatccata gttgcgacag ttgatgtgaa 1500 tgtagtagct acacccacag gttaagtcaa ttcgagagcg tcgaattgct cgcttcttgg 1560 caaccctgtg ttgcgctttg atcgacggag gagaagagtg gttctttgag ggtgtagaat 1620 tccgcatttt ttgaagccca cacctttagc gacgcattat cagcttcgtc caagtactct 1680 ttataggagg atttgggacc tgggttacag agaaagatgg tggggattcc acctttaatg 1740 tgtgtgggct ttccgtattt tacatttgac tgccagtctc tttgcgcgcc catgaattct 1800 ttgaaatgtt tcaaataatg tggatcaacg tcatcgatga cgttatacca tgcctcgtta 1860 gagaaaatct tatcgttcag atccaagtgg ccgcaaagat aattatgagg acccaatgct 1920 cttgcccaca tggttttacc cgtccgacta tcaccttcaa tcactatact tatgggtctc 1980 tccggccgcg cagcgggatc ccttacattt tctgaagccc atgaagaaat atattctgga 2040 actctattaa atgtatctat actataaggc gacacatatg cctgaatagg cgaaatgaaa 2100 atcttagtca aattacaatt taaattatga aattgtaaaa tataatcctt tggagccttc 2160 tctttcaata tatcgagggc ctgtgatttg gatccacagt tgagtgcctc ggcatacgcg 2220 tcgttggcag actgtttacc tcctctagcc gatcttccat cgatttggaa ggttccatga 2280 tcaaggacgt ctccgtcttt ctccatgtat tgcttaacat ctgagcagct ttgagctgcc 2340 tgaatgttcg gatggaaatg tgttgacctg gttgaggata ccaggtcgaa gaacctttgg 2400 ttacgtgtgt ggaatttgcc ttcgaattgc agcagaacat ggagatgagg ttctccattc 2460 tcgtgaagct ctcggcagat gcgaatgaat cttttgttaa ctggtgttga caaagctaat 2520 agttgctcca gtgtgtcctc tttagttaga ggacatcgag gatatgtaag gaaatagttt 2580 ttagcgttta tagcaaaacg acgctctctt ggcattttta aagtcgtttt tgtatcggtt 2640 gtccaccgat tctcatttac tcctgtcaat cggtgaatgg tgacgcatat atagtagagc 2700 tactaatccc ccaaggggca ctcagcaata atatt 2735 //