Dbfetch
ID KC019304; SV 1; circular; genomic DNA; STD; VRL; 2745 BP. XX AC KC019304; XX DT 19-FEB-2013 (Rel. 115, Created) DT 19-FEB-2013 (Rel. 115, Last updated, Version 1) XX DE Mungbean yellow mosaic India virus isolate India:Varanasi:French bean:2011 DE segment DNA-A, complete sequence. XX KW . XX OS Mungbean yellow mosaic India virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2745 RA Bhatt B.S., Singh R.P., Kale R.K., Singh A.K.; RT "Molecular Characterization of Bean Dwarf Mosaic Virus"; RL Unpublished. XX RN [2] RP 1-2745 RA Bhatt B.S., Singh R.P., Kale R.K., Singh A.K.; RT ; RL Submitted (29-OCT-2012) to the INSDC. RL School of Life Sciences, Central University of Gujarat, Sector-30, RL Gandhinagar, Gujarat 382030, India XX DR MD5; ebb7c51e41995c1c84979cc5520dcfe4. XX CC ##Assembly-Data-START## CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2745 FT /organism="Mungbean yellow mosaic India virus" FT /segment="DNA-A" FT /host="Phaseolus vulgaris" FT /isolate="India:Varanasi:French bean:2011" FT /mol_type="genomic DNA" FT /country="India" FT /isolation_source="leaf" FT /collection_date="2011" FT /clone="22" FT /db_xref="taxon:223287" FT gene 156..497 FT /gene="AV2" FT CDS 156..497 FT /codon_start=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:Q1KWZ4" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:Q1KWZ4" FT /protein_id="AGF33897.1" FT /translation="MWDPLLNDFPESLHGFRCMLAIKYLQQVQENYPSNSLGFLYLTGL FT IQVLRIRNHAQADLRYGLLYPDIECTEKIKLRYPARAACVCGRCPYQHEEKTLDQPPHV FT EETSVLPTV" FT gene 316..1089 FT /gene="AV1" FT CDS 316..1089 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /note="role in encapsidation of virus particles" FT /db_xref="GOA:M1LGC7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:M1LGC7" FT /protein_id="AGF33898.1" FT /translation="MPKRTYDTAFSTPISNARRRLNFDTPLVLPASVGGVPTNMKRRRW FT TNRPMWRKPRFYRLYRSPDVPRGCEGPCKVQSFEQKHDIAHTGKVICISDVTRGNGITH FT RIGKRFCIKAVYITGKVWMDENIKSKNHTNTVMFKLCRDRRPFGTPMDFGQVFNMYDNE FT PSTATVKNDLRDRYQVLRKFSATVTGGQYACKEQAMVNRFFKVNNYVVYNHQEAAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSILN" FT gene complement(1086..1490) FT /gene="AC3" FT CDS complement(1086..1490) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /note="REn" FT /db_xref="GOA:M1L4K3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:M1L4K3" FT /protein_id="AGF33899.1" FT /translation="MDFRTGEYITAAQLKSGVYIWEVQNPLSFKIMHHSPILAGSRMMM FT TELRIMFNHGLKKALGMHKCFLDLKLYHYLTATSGMILSIFRRQLFKFLNNLGVISLAN FT ILYFATDFLYVKLHLVEDVNFTHNVQYKLY" FT gene complement(1228..1680) FT /gene="AC2" FT CDS complement(1228..1680) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /note="TrAP" FT /db_xref="GOA:M1KZN0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:M1KZN0" FT /protein_id="AGF33900.1" FT /translation="MKRTMLRLNSGLQRMRNSTPSKNHCSPPSIKVQHRVAKKRAIRRS FT RIDLTCGCSYYIHINCRNYGFSHRGVHHCSSTQEWRLYLGGAKSPLFQDHAPQSNSSRV FT QNDDDRAAHNVQPRVEESTGDAQVLPGLEALPLFDGDFWDDLIDLP" FT gene complement(1538..2626) FT /gene="AC1" FT CDS complement(1538..2626) FT /codon_start=1 FT /gene="AC1" FT /product="replication initiator protein" FT /note="Rep" FT /db_xref="GOA:C7TP90" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:C7TP90" FT /protein_id="AGF33901.1" FT /translation="MPREGRFAINARNYFLTYPRCPLTKEDALEQLLALSTPVNKKFIR FT ICRELHEDGQPHLHVLLQFEGKQQTRNQRFFDLYSRCRSTHYHPNIQAAKSCSDVKTYM FT EKDGDILDHGTFQIDGRSARGGKQSANDAYAEALNSGSKLEALLILKEKAPKDFILQFH FT NLNCNLSRIFTEPIQAYKSPFTLESFNKVPSYISSWAERNVRDPAARPDRPISIVIEGD FT SRTGKTMWARAIGPHNYLCGHLDLNDKTYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNVKYGKPTKIKGGIPTIFLCNPGPKSSYKEYLDEENNAALKQWASKNAEFYTLKEPL FT FSTVNQGSTQGRQEESNSTISN" FT gene complement(2176..2475) FT /gene="AC4" FT CDS complement(2176..2475) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:M1L6P7" FT /protein_id="AGF33902.1" FT /translation="MKMDNLISMFCFSSKGSNKRGTKGSSTSIPDAGQHITIRTFRQLR FT AAQMLKHTWRKTETFLIMEPSKSMADQLEEVNNLPTTHTPRHSTLDQSWRPSLY" XX SQ Sequence 2745 BP; 732 A; 575 C; 612 G; 826 T; 0 other; acctgagtgc cccgcgaccg gtgtattggg gttactttaa cttttttgct tttgtggtac 60 ccttatcttt agtcgttcaa tcagaagcgc tcctcagcgc tatgttaatt caaatttgaa 120 ttataaagca agtggacact ctgaacccac taacaatgtg ggatccattg ttgaacgact 180 ttcccgaatc actgcatgga ttccggtgca tgttggcaat aaagtatttg cagcaagttc 240 aagagaatta tccatctaat tctcttggtt ttttgtacct tacagggtta attcaggtat 300 tgcgcatccg gaatcatgcc caagcggacc tacgatacgg ccttctctac cccgatatcg 360 aatgcacgga gaagattaaa cttcgatacc ccgctcgtgc tgcctgcgtc tgtgggaggt 420 gtccctacca acatgaagag aagacgttgg accaaccgcc ccatgtggag gaaacctcgg 480 ttttaccgac tgtataggtc ccctgatgtc cctcgtggtt gtgagggacc atgtaaagtt 540 caatcatttg agcaaaagca tgatattgcc cacacaggca aagtgatttg catatctgac 600 gtgactagag gtaatggaat tacacatcgt attggcaaac gattttgcat caaggccgtg 660 tacattactg gtaaggtttg gatggacgaa aatattaagt ctaaaaatca cacgaacact 720 gtgatgttca agttatgtcg tgacagacga ccttttggta cacccatgga ttttggtcaa 780 gtgttcaaca tgtatgacaa tgagcccagt acagctactg tgaagaacga tctgcgtgat 840 cgttatcaag tcttgcgaaa gtttagtgcc actgttactg gtggccaata tgcttgtaag 900 gaacaagcca tggtgaatcg ttttttcaaa gttaataatt atgttgttta caaccaccag 960 gaggcagcga agtatgagaa ccatactgag aacgcattat tattgtatat ggcatgtact 1020 catgcctcaa atcctgtgta tgcaacactt aaaattcgga tctattttta tgattcgata 1080 ttgaattaat aaagtttgta ttgaacatta tgcgtaaagt ttacatcctc caccaaatgg 1140 agttttacat acaggaaatc cgtcgcgaaa tataaaatat ttgctaagct aatgactcct 1200 aaattattta gaaacttaaa taattgtcta cggaagatcg ataagatcat cccagaagtc 1260 gccgtcaaat aatggtagag cttcaagtcc aggaagcact tgtgcatccc cagtgctttc 1320 ttcaacccgt ggttgaacat tatgcgcagc tcggtcatca tcattctgga ccctgctaga 1380 attggactgt ggtgcatgat cttgaaagag aggggatttt gcacctccca gatatagacg 1440 ccactcttga gttgagctgc agtgatgtac tcccctgtgc gaaaatccat agttgcggca 1500 gttgatgtgg atgtaatagc tacacccaca ggttagatca attcgagatc gtcgaattgc 1560 tctcttcttg gcgaccctgt gttgaacctt gattgacggt ggagaacagt ggttctttga 1620 gggtgtagaa ttccgcattc tttgaagccc actgtttaag cgcagcattg ttctcttcat 1680 ccaagtactc tttataggac gacttgggac cagggttaca cagaaagatg gtggggatac 1740 cacctttaat tttagtgggc ttcccgtact tgacgttaga ctgccagtct ctttgcgcgc 1800 ccatgaattc tttgaaatgt ttcaaataat gtggatcaac gtcatcgatg acgttgtacc 1860 atgcctcgtt agagtatgtt ttgtcgttta gatccaaatg gccgcaaaga taattatgag 1920 gacctatggc acgtgcccac atggttttac ccgtgcgact atctccttca ataacaatac 1980 taataggtct atctggccgc gcagcgggat ctctcacatt tctttcagcc catgaagaaa 2040 tgtagctggg aaccttgttg aatgattcta atgtaaaagg cgacttatat gcctgaatag 2100 gctctgtgaa tatccgagac aaattacaat ttaagttatg aaattgtaaa ataaaatcct 2160 tgggagcctt ttcttttaat ataaggaggg cctccaactt tgatccagag ttgagtgcct 2220 cggcgtatgc gtcgttggca gattgtttac ctcctctagc tgatctgcca tcgatttgga 2280 aggttccatg atcaagaatg tctccgtctt tctccatgta tgttttaaca tctgagcagc 2340 tcttagctgc ctgaatgttc ggatggtaat gtgttgaccg gcatctggaa tagaggtcga 2400 agaacctttg gttcctcgtt tgttgcttcc cttcgaactg aagcagaaca tggagatgag 2460 gttgtccatc ttcatggagt tcacgacaga tgcggatgaa cttcttgtta accggtgttg 2520 acaacgcgag aagttgttca agagcgtcct cctttgtaag aggacatctg ggatatgtca 2580 agaaatagtt tcttgcgttt atagcaaaac gaccttccct tggcatattt gaagtcgttt 2640 tgtatcggtg tacaccgatt acttctctat ccccctatcg gtgtatcggt gtactatata 2700 tactagagct actaaaagcc cataggggca ctcagctata atatt 2745 //