ID KC004133; SV 1; circular; genomic DNA; STD; VRL; 2648 BP. XX AC KC004133; XX DT 21-NOV-2012 (Rel. 114, Created) DT 23-JAN-2013 (Rel. 115, Last updated, Version 2) XX DE Macroptilium yellow spot virus isolate BR:Oaf25:11 segment DNA-A, complete DE sequence. XX KW . XX OS Macroptilium yellow spot virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2648 RX PUBMED; 23136367. RA Lima A.T., Sobrinho R.R., Gonzalez-Aguilera J., Rocha C.S., Silva S.J., RA Xavier C.A., Silva F.N., Duffy S., Zerbini F.M.; RT "Synonymous site variation due to recombination explains higher genetic RT variability in begomovirus populations infecting non-cultivated hosts"; RL J. Gen. Virol. 94(Pt 2):418-431(2013). XX RN [2] RP 1-2648 RA Lima A.T., Sobrinho R.R., Aguilera J.G., Rocha C.S., Silva S.J., RA Xavier C.A., Silva F.N., Duffy S., Zerbini F.M.; RT ; RL Submitted (24-OCT-2012) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, Minas Gerais 36570-000, Brazil XX DR MD5; 20d1371fcdc11da93207a6e40ed4b630. XX CC ##Assembly-Data-START## CC Assembly Method :: DNAMAN v. 4.0 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2648 FT /organism="Macroptilium yellow spot virus" FT /segment="DNA-A" FT /host="Macroptilium lathyroides" FT /isolate="BR:Oaf25:11" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="2011" FT /clone="RC95-2B" FT /db_xref="taxon:1129034" FT CDS 222..977 FT /codon_start=1 FT /product="CP" FT /note="coat protein" FT /db_xref="GOA:H8ZQT4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:H8ZQT4" FT /protein_id="AFX60794.1" FT /translation="MVKRDAPWRHMAGTSKVSRNNNYSPRGGGGPKNNRASEWVNRPMY FT RKPRIYRMYRTPDVPRGCEGPCKVQSFEQRHDISHVGKVICMSDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYSSPMDFGQVFNMFDNEPSTATV FT KNDLRDRFQVMHRFYAKVTGGQYASNEQAIVRRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSILN" FT CDS complement(974..1372) FT /codon_start=1 FT /product="REN" FT /note="replication-enhancer protein" FT /db_xref="GOA:K7XDZ0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:K7XDZ0" FT /protein_id="AFX60795.1" FT /translation="MDSRTGELITAHQAESGVYIWEISNPLYFKINHVEDPLHTMTRIY FT HVQIRFNHNLRRALALHKAYLNFQVWTISLRASGTTYLVRFKYLVMLYLERIGVISLNN FT VIRAVRFATDKSYVNYVLENHEIKFKFY" FT CDS complement(1119..1508) FT /codon_start=1 FT /product="TRAP" FT /note="transactivating protein" FT /db_xref="GOA:K7X0A5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:K7X0A5" FT /protein_id="AFX60797.1" FT /translation="MRNSSSSTPPSIKVQHRAAKKRAIRRRRIDIDCGCSIYVHINCRG FT HGFTHRGTHHCTSGREWRLYLGDIKSPLFQDQPRGGSTSHNDQDIPRPDQVQPQPQESI FT GSPQGISQFPSLDDIPESFWDDIFS" FT CDS complement(1459..2505) FT /codon_start=1 FT /product="REP" FT /note="replication-associated protein" FT /db_xref="GOA:K7WKE9" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:K7WKE9" FT /protein_id="AFX60796.1" FT /translation="MPPPKRFRISAKNYFLTYPQCSLTKEAALEQILSLQTSSNKKFIK FT IARELHEDGQPHLHVLLQFEGKFICTNSRLFDLVSPTRSAHFHPNIQGAKSSSDVKSYV FT DKDGDTIEWGEFQVDARSARGGQQTANESYAKVLNAQNLEQALQILKEEQPKDYVLQHH FT NIRSNLERIFSKAPEPWAPPFHLSSFTNVPKEMQDWSDNYFGRGAAARPERPISIIIEG FT DSRTGKTMWARALGSHNYLSGHLDFNSKVYSNDVQYNVIDDIAPQYLKLKHWKELIGAQ FT KDWQSNCKYGKPVQIKGGIPCIVLCNPGEGASYKSFLDKEENASLRQWTIHNAKFVFLN FT SPLYQGST" FT CDS complement(2091..2348) FT /codon_start=1 FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:K7WMU9" FT /protein_id="AFX60798.1" FT /translation="MGSLISTSCFNLKGNSSAQIADCSTWYPQQDQHISIQTFRELNQA FT PTSSPTSTRMETPLNGENFRSMLVLQEVANRLQTSLTPRF" XX SQ Sequence 2648 BP; 690 A; 546 C; 613 G; 799 T; 0 other; accggatggc cgcgcgattt tttatgggcc ttttcttttg ggctcgttct tttggaccga 60 gtgtatttga attaaagtcg ttgtatttga attaaagtca gttattttag ttggtccaat 120 gaatatgcgc ctgactagct tagatatgca caacttcgtc cccaagttgg tggctaacgg 180 gtatatatgt taagaataac tgactacttc tttaattcag aatggttaag cgggacgccc 240 catggcgcca catggcagga acctcaaagg tttcccgcaa taacaactat tcccctcgtg 300 gaggtggagg tccaaaaaat aacagggcct ctgaatgggt taataggccc atgtacagaa 360 agcccaggat ctatcgtatg tacagaaccc ccgatgtgcc tagggggtgt gaaggcccat 420 gtaaggttca atcgtttgaa cagcgtcacg atatatccca tgttggtaag gttatatgta 480 tgtctgacgt gacaagaggt aatggtatta cccatcgtgt aggaaaacgt ttttgtgtta 540 agtctgtata tattctaggt aagatatgga tggacgagaa catcaagttg aagaatcaca 600 cgaacagtgt gatgttttgg ttggtcagag accggagacc ctatagctcc cctatggact 660 ttggccaagt gttcaacatg tttgacaatg agcccagtac tgctacggtt aagaacgatc 720 ttcgtgatcg ttttcaagtt atgcatcgat tctatgccaa agtcactggt ggacagtatg 780 cgagcaatga gcaagcaatt gtgaggcgtt tttggaaggt caacaatcat gttgtctaca 840 accaccaaga agcagggaaa tacgagaatc atacggagaa cgcactacta ctgtatatgg 900 catgtactca tgcctctaac cccgtgtatg caacattaaa aattcggatc tatttttacg 960 attcgatact caattaataa aatttgaatt ttatttcatg attctccagt acataattta 1020 catatgattt gtctgttgca aatcgaacag ctctgattac attgttaagc gaaataacac 1080 ctattcgttc taagtacaac atgactaagt atttaaatct aactaaatat gtcgtcccag 1140 aagctctcag ggatatcgtc cagacttgga aattgagata tgccttgtgg agagccaatg 1200 ctctcctgag gttgtggttg aacctgatct ggacgtggta tatcctggtc attgtgtgaa 1260 gtggatcctc cacgtggttg atcttgaaat aaaggggatt tgatatctcc cagatataga 1320 cgccactctc tgcctgatgt gcagtgatga gttcccctgt gcgtgaatcc atgtcctctg 1380 cagttgatat ggacgtatat ggagcacccg caatctatgt caattcgtct tctcctgatt 1440 gctctcttct tcgccgctct atgttgaacc ttgatagagg ggggagttga ggaagacgaa 1500 tttcgcattg tgtatcgtcc actgtctaag tgatgcgttt tcctctttgt cgaggaatga 1560 tttatagctg gcgccctcgc caggattgca aagcacaatg catgggattc cacctttaat 1620 ttgaactggc ttgccgtatt tgcaatttga ttgccaatcc ttttgagcac ctatcaattc 1680 tttccagtgc tttaacttta gatattgcgg tgcgatgtca tcaatgacgt tatactgcac 1740 atcatttgaa tagaccttcg aattgaaatc gaggtgacca ctcaagtaat tatgggaccc 1800 caatgcacgt gcccacatgg tcttgcccgt tcgagagtca ccctcgatga ttatactaat 1860 tggtctctcc ggccgcgcag cggcacctct cccgaaataa ttatctgacc agtcttgcat 1920 ctcctttggc acgttagtga acgaggagag gtgaaacgga ggagcccatg gctccggagc 1980 ctttgaaaag atacgctcta ggttagagcg tatgttatgg tgttgaagga catagtcttt 2040 aggttgttcc tccttcaata tttgaagggc ctgttcaagg ttctgtgcgt tcagaacctt 2100 ggcgtaagac tcgtttgcag tctgttggcc acctcttgca gaacgagcat cgacctgaaa 2160 ttctccccat tcaatggtgt ctccatcctt gtcgacgtag gacttgacgt cggagcttga 2220 tttagctccc tgaatgtttg gatggaaatg tgctgatctt gttggggata ccaagtcgaa 2280 caatctgcta tttgtgcaga tgaatttccc ttcaaattga agcaggacgt ggagatgagg 2340 ctgcccatct tcgtgaagct ctcttgctat tttgatgaac ttcttgttgg atgaagtttg 2400 taaggataat atctgttcaa gagcagcctc tttagttaac gagcactggg gatatgtgag 2460 gaaataattt ttggcagata ttctaaaacg tttgggcggt ggcattcttg taaatagaag 2520 gatgtcacca aatggttccg ctctaaaact ctatagcaat tggtgacatt ggtgtacaat 2580 atatactaga accctcaata gaactttcaa tctcaatcac ccacgtggcg gccatccgat 2640 ataatatt 2648 //