ID KC004131; SV 1; circular; genomic DNA; STD; VRL; 2658 BP. XX AC KC004131; XX DT 21-NOV-2012 (Rel. 114, Created) DT 23-JAN-2013 (Rel. 115, Last updated, Version 2) XX DE Macroptilium yellow spot virus isolate BR:Crb6:11 segment DNA-A, complete DE sequence. XX KW . XX OS Macroptilium yellow spot virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2658 RX PUBMED; 23136367. RA Lima A.T., Sobrinho R.R., Gonzalez-Aguilera J., Rocha C.S., Silva S.J., RA Xavier C.A., Silva F.N., Duffy S., Zerbini F.M.; RT "Synonymous site variation due to recombination explains higher genetic RT variability in begomovirus populations infecting non-cultivated hosts"; RL J. Gen. Virol. 94(Pt 2):418-431(2013). XX RN [2] RP 1-2658 RA Lima A.T., Sobrinho R.R., Aguilera J.G., Rocha C.S., Silva S.J., RA Xavier C.A., Silva F.N., Duffy S., Zerbini F.M.; RT ; RL Submitted (24-OCT-2012) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, Minas Gerais 36570-000, Brazil XX DR MD5; 0d353baf152bce2ae37f1af4f682d5ea. XX CC ##Assembly-Data-START## CC Assembly Method :: DNAMAN v. 4.0 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2658 FT /organism="Macroptilium yellow spot virus" FT /segment="DNA-A" FT /host="Phaseolus vulgaris" FT /isolate="BR:Crb6:11" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="2011" FT /clone="RC91" FT /db_xref="taxon:1129034" FT CDS 202..957 FT /codon_start=1 FT /product="CP" FT /note="coat protein" FT /db_xref="GOA:H8ZQU4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:H8ZQU4" FT /protein_id="AFX60784.1" FT /translation="MVKRDAPWRHMAGTSKVSRNNNYSPRGGGGPKNNRASEWVNRPMY FT RKPRIYRMYRTPDVPRGCEGPCKVQSFEQRHDISHVGKVICMSDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYSSPMDFGQVFNMFDNEPSTATI FT KNDLRDRFQVMHRFYAKVTGGQYASNEQAIVRRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSILN" FT CDS complement(954..1352) FT /codon_start=1 FT /product="REN" FT /note="replication-enhancer protein" FT /db_xref="GOA:K7XDY0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:K7XDY0" FT /protein_id="AFX60785.1" FT /translation="MDSRTGELITAHQAENGVYIWEISNPLYFKINHVEDPLHTTTRIY FT HVQIRFNHNLRRALALHKAYLNFQVWTTSLRASGTTYLVRFKYLVMLYLDRIGVISLNN FT VIRAVRFATDKSYVNYVLENHEIKFKFY" FT CDS complement(1099..1488) FT /codon_start=1 FT /product="TRAP" FT /note="transactivating protein" FT /db_xref="GOA:K7X005" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:K7X005" FT /protein_id="AFX60787.1" FT /translation="MRNSSSSTPPSIKVQHRAAKKRAIRRRRIDIDCGCSIYVHINCRG FT HGFTHRGTHHCTSGREWRLYLGDIKSPLFQDQPRGGSTTHDNQDIPRPDQVQPQPQESI FT GSPQGISQFPSLDDIPESFWDDIFS" FT CDS complement(1439..2485) FT /codon_start=1 FT /product="REP" FT /note="replication-associated protein" FT /db_xref="GOA:K7WK04" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:K7WK04" FT /protein_id="AFX60786.1" FT /translation="MPPPRRFKIQSKNYFLTYPKCSISKEEALAQLLALDTPTNKKYIR FT VCRELHGNGEPHLHALLQFEGKFTCTNCRFFDLRHPSHSNVCHGKYESCKSSSDAKSYI FT EKDGDYVEWGDFQIDGRSARGGQQTVNDTYAKALNASCAEEALQIIKEEQPQHFFLQHH FT NLVANAYRIFQKAPEPWTPPFPLSSFINVPEEMKAWADDYFGRSAAARPERPISIIIEG FT DSRTGKTMWARALGSHNYLSGHLDFNSKVYSNDVQYNVIDDIAPQYLKLKHWKELIGAQ FT KDWQSNCKYGKPVQIKGGIPCIVLCNPGEGASYKSFLDKEENTSLRQWTIHNAQFVFLN FT SPLYQGST" FT CDS complement(2071..2328) FT /codon_start=1 FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:H8ZQP8" FT /protein_id="AFX60788.1" FT /translation="MGSLISMLCCNSKVSSHARIADSSTCDIPVIQMFVMENTNHASHP FT PTPNHILRRTEITSNGVIFRSTDDLLEEVNRQLTIHMQRR" XX SQ Sequence 2658 BP; 699 A; 549 C; 603 G; 807 T; 0 other; accggatggc cgcgcgattt tttatgggcc ttttcttttg ggctcgttct tttggaccga 60 gtgtatttga attaaagtca gttattttat ttggtccaat gaatatgcgt ctgactagct 120 tagataatga caacttggtc cccaagttgg tggctaacgg gtatatatgt taagaataac 180 tgactatttc tttaattcag aatggttaag cgggacgccc catggcgcca catggcagga 240 acctcaaagg tttcccgcaa taacaactat tctcctcgtg gaggtggagg tccaaaaaac 300 aacagggcct ctgaatgggt taataggccc atgtacagaa agcccaggat atatcggatg 360 tacagaaccc ccgatgtgcc tagagggtgt gaaggcccat gtaaggttca gtcctttgaa 420 caacgacacg atatatccca tgttggtaag gttatctgta tgtctgacgt gacaagaggt 480 aatggtatta cccatcgtgt aggaaaacgt ttttgtgtta agtctgtata tattctaggt 540 aagatatgga tggacgagaa catcaagttg aagaatcaca cgaacagtgt gatgttttgg 600 ttggtcagag acagaagacc ctatagctct cccatggact ttggccaagt gttcaacatg 660 tttgacaatg agcccagtac tgctactatt aagaacgatc ttcgtgatcg ttttcaagtc 720 atgcatcgat tttatgccaa agtcactggt ggacagtatg cgagcaacga gcaagcaatt 780 gtcaggcgtt tttggaaggt caacaatcat gttgtctaca accaccaaga agcagggaaa 840 tacgagaatc atacggagaa cgcactacta ttgtatatgg catgtactca tgcctctaac 900 cccgtgtatg caaccttaaa aattcggatc tatttttacg attcgatact caattaataa 960 aatttgaatt ttatttcatg attctccagt acataattta catatgactt gtctgttgca 1020 aatcgaacag ctctgattac attgttaagc gaaataacac ctattcggtc taagtacaac 1080 atgactaagt atttaaacct aactaaatat gtcgtcccag aagctctcag ggatgtcgtc 1140 cagacttgga aattgagata tgccttgtgg agagccaatg ctctcctgag gttgtggttg 1200 aacctgatct ggacgtggta tatcctggtt gtcgtgtgta gtggatcctc cacgtggttg 1260 atcttgaaat aaaggggatt tgatatctcc cagatataga cgccattctc tgcctgatgt 1320 gcagtgatga gttcccctgt gcgtgaatcc atgtcctctg cagttgatat ggacgtatat 1380 ggagcacccg caatctatgt caattcgtct tctcctgatt gctctcttct tggccgctct 1440 atgttgaacc ttgatagagg ggggagttga ggaagacgaa ttgcgcattg tgtatcgtcc 1500 actgtctaag tgatgtgttt tcctctttgt cgaggaatga tttatagctg gcgccctcgc 1560 caggattgca aagcacaatg catgggattc cacctttaat ttgaactggc ttgccgtatt 1620 tgcaattcga ttgccagtcc ttttgagcac ctatcaattc tttccagtgc tttaacttta 1680 gatattgcgg tgcgatgtca tctatcacgt tgtactgcac atcatttgaa tagacctttg 1740 aattgaaatc gaggtgacca ctcaagtaat tatgggaccc caatgcacgt gcccacatgg 1800 tcttgcccgt tcgagagtca ccctcgatga ttatacttat tggtctctcc ggccgcgcag 1860 cggcacttct tccgaaatag tcatctgccc aagctttcat ctcttctggg acattaatga 1920 aagaagagag tggaaacgga ggagtccatg gctccggagc cttttgaaag atacgatatg 1980 cgttagccac aagattgtga tgttggagga agaagtgctg tggttgttcc tcctttatta 2040 tttgaagtgc ttcttcagca caagaagcat ttaacgcctt tgcatatgta tcgttaactg 2100 tctgttgacc tcctcgagca gatcgtccgt cgatctgaaa atcaccccat tcgacgtaat 2160 ctccgtcctt ctcaatatat gatttggcgt cggaggatga cttgcatgat tcgtattttc 2220 catgacaaac atttgaatga ctgggatgtc gcaagtcgaa gaatctgcaa ttcgtgcatg 2280 tgaacttacc ttcgaattgc agcaaagcat ggagatgagg ctccccattt ccgtgtaatt 2340 ctctgcatac acggatatat tttttgtttg taggtgtgtc taaggctaga agttgagcaa 2400 gtgcctcttc tttggagata gagcacttgg gataagtaag gaaataattt ttggactgaa 2460 ttttaaaacg tctgggcggt ggcatatttg taaattaaga gatgtctcca aatggctctc 2520 ttgtaattat gcgagtgtct ccaattccgc tccgctcaaa cttgctctat caattggaga 2580 ctggagacaa tttatactag aaccctcaat agaacttcta atcgtattca cacacgtggc 2640 ggccatccgt ataatatt 2658 //