ID KC004130; SV 1; circular; genomic DNA; STD; VRL; 2648 BP. XX AC KC004130; XX DT 21-NOV-2012 (Rel. 114, Created) DT 23-JAN-2013 (Rel. 115, Last updated, Version 2) XX DE Macroptilium yellow spot virus isolate BR:Oaf14:11 segment DNA-A, complete DE sequence. XX KW . XX OS Macroptilium yellow spot virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2648 RX PUBMED; 23136367. RA Lima A.T., Sobrinho R.R., Gonzalez-Aguilera J., Rocha C.S., Silva S.J., RA Xavier C.A., Silva F.N., Duffy S., Zerbini F.M.; RT "Synonymous site variation due to recombination explains higher genetic RT variability in begomovirus populations infecting non-cultivated hosts"; RL J. Gen. Virol. 94(Pt 2):418-431(2013). XX RN [2] RP 1-2648 RA Lima A.T., Sobrinho R.R., Aguilera J.G., Rocha C.S., Silva S.J., RA Xavier C.A., Silva F.N., Duffy S., Zerbini F.M.; RT ; RL Submitted (24-OCT-2012) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, Minas Gerais 36570-000, Brazil XX DR MD5; 6ecc58fe13a8992f06bfe9dc99a75c7c. XX CC ##Assembly-Data-START## CC Assembly Method :: DNAMAN v. 4.0 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2648 FT /organism="Macroptilium yellow spot virus" FT /segment="DNA-A" FT /host="Phaseolus vulgaris" FT /isolate="BR:Oaf14:11" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="2011" FT /clone="RC90-2" FT /db_xref="taxon:1129034" FT CDS 222..977 FT /codon_start=1 FT /product="CP" FT /note="coat protein" FT /db_xref="GOA:H8ZQT4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:H8ZQT4" FT /protein_id="AFX60779.1" FT /translation="MVKRDAPWRHMAGTSKVSRNNNYSPRGGGGPKNNRASEWVNRPMY FT RKPRIYRMYRTPDVPRGCEGPCKVQSFEQRHDISHVGKVICMSDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYSSPMDFGQVFNMFDNEPSTATV FT KNDLRDRFQVMHRFYAKVTGGQYASNEQAIVRRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSILN" FT CDS complement(974..1372) FT /codon_start=1 FT /product="REN" FT /note="replication-enhancer protein" FT /db_xref="GOA:K7XDX6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:K7XDX6" FT /protein_id="AFX60780.1" FT /translation="MDSRTGELITAHQAESGVYIWEISNPLYFKINNVEDPLHTMTRIY FT HIQIRFNHNLRKALALHKAYLNFQVWTISLRASGTTYLVRFKYLVMLYLDRIGVISLNN FT VIRAVRLATDKSYVNYVLENHEIKFKFY" FT CDS complement(1119..1508) FT /codon_start=1 FT /product="TRAP" FT /note="transactivating protein" FT /db_xref="GOA:K7X097" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:K7X097" FT /protein_id="AFX60782.1" FT /translation="MRNSSSSTPPSIKVQHRAAKKRAIRRRRIDIDCGCSIYVHINCRG FT HGFTHRGTHHCTSGREWRLYLGDIKSPLFQDQQRRGSTSHNDQNIPHPDQVQPQPEESI FT GSPQGISQFPSLDNIPESFWDDIFS" FT CDS complement(1459..2505) FT /codon_start=1 FT /product="REP" FT /note="replication-associated protein" FT /db_xref="GOA:K7WKD8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:K7WKD8" FT /protein_id="AFX60781.1" FT /translation="MPPPKRFRISAKNYFLTYPQCSLTKEAALEQILSLQTSSNKKFIK FT IARELHEDGQPHLHVLLQFEGKLICTNSRLFDLVSPTRSAHFHPNIQGAKSSSDVKSYV FT DKDGDTIEWGEFQVDARSARGGQQTANESYAKVLNAQNLDQALQILKEEQPKDFVLHHH FT NIRSNLERIFAKAPEPWTPPFHLSSFTNVPEEMQAWADDYFGRGAAARPERPISIIIEG FT DSRTGKTMWARALGSHNYLSGHLDFNSRVYSNDVQYNVIDDIAPQYLKLKHWKELIGAQ FT KDWQSNCKYGKPVQIKGGIPCIVLCNPGEGASYKSFLDKEENASLRQWTIHNAKFVFLN FT SPLYQGST" FT CDS complement(2091..2348) FT /codon_start=1 FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:K7WMU0" FT /protein_id="AFX60783.1" FT /translation="MGSLISTSCFNSKGNSSAQIADCSTWYPQQDQHISIRTFRELNRA FT PTSSPTSTRMETPLNGVNFRSMLVLQEVANRLQTSHTPRF" XX SQ Sequence 2648 BP; 693 A; 542 C; 607 G; 806 T; 0 other; accggatggc cgcgcgattt tttatgggcc ttttcttttg ggctcgttct tttggaccga 60 gtgtatttga attaaagtca ttgtatttga attaaagtca gttattttgt ttggtccaat 120 gaatatgcgc ctgactagct tagatattca caacttggtc cccaagttgg tggctaatgg 180 gtatatatgc taagaataac tgactatttc tttaattcag aatggttaag cgggacgccc 240 catggcgcca catggcagga acctcaaagg tttcccgcaa taacaactat tctcctcgtg 300 gaggtggagg tccaaaaaac aacagggcct ctgaatgggt taataggccc atgtacagaa 360 agcccaggat atatcggatg tacagaaccc ccgatgttcc aagggggtgt gaaggcccat 420 gtaaggttca atcttttgaa cagcgtcacg atatatccca tgttggtaag gttatatgta 480 tgtctgacgt gacaagaggt aatggtatta cccatcgtgt aggaaaacgt ttttgtgtta 540 agtctgtata tattctaggt aagatatgga tggacgagaa catcaagttg aagaatcaca 600 cgaacagtgt gatgttttgg ttggtcagag accggagacc ctatagctcc cctatggact 660 ttggccaagt gttcaacatg tttgacaatg agcccagtac tgctacggtt aagaacgatc 720 ttcgtgatcg ttttcaagtt atgcatcgat tttatgccaa agttactggt ggacagtatg 780 cgagcaacga gcaagcaatt gtgaggcgtt tttggaaggt caacaatcat gttgtctaca 840 accaccaaga agcagggaaa tacgagaatc atacggagaa cgccttatta ctgtatatgg 900 catgtactca tgcctctaac cccgtgtatg caaccttaaa aattcggatc tatttttatg 960 attcgatact caattaataa aatttgaatt ttatttcatg attctccagt acataattta 1020 catatgattt gtctgttgca agtcgaacag ctctgattac attgttaagc gaaataacac 1080 ctattcggtc taagtacaac atgactaagt atttaaatct aactaaatat gtcgtcccag 1140 aagctctcag ggatattgtc cagacttgga aattgagata tgccttgtgg agagccaatg 1200 ctttcctcag gttgtggttg aacctgatct ggatgtggta tattctggtc attgtgtgaa 1260 gtggatcctc tacgttgttg atcttgaaat aaaggggatt tgatatctcc cagatataga 1320 cgccactctc tgcctgatgt gcagtgatga gttcccctgt gcgtgaatcc atgtcctcta 1380 cagttgatat ggacgtatat ggagcacccg caatctatgt caattcgtct tcgcctgatt 1440 gctctcttct tggccgctct atgttgaacc ttgatagagg ggggagttga ggaagacgaa 1500 tttcgcattg tgtattgtcc actgtctaag tgatgcgttt tcctctttgt cgaggaatga 1560 tttatagctg gcgccctcgc caggattgca aagcacaatg catgggattc cacctttaat 1620 ttgaactggc ttcccgtatt tgcaatttga ttgccagtcc ttttgagcac ctatcaattc 1680 tttccagtgc tttaacttta gatattgcgg tgcgatgtca tctatcacgt tatactgcac 1740 atcatttgaa tagacccttg aattgaaatc gaggtgacca ctcaagtaat tatgggaccc 1800 caatgcacgt gcccacatgg tcttgcccgt tcgagagtca ccctcgatga ttatactaat 1860 tggtctctcc ggccgcgcag cggcacctct cccaaaataa tcatccgccc aagcttgcat 1920 ctcctctggg acgttagtga acgaggagag gtgaaacgga ggagtccatg gctccggagc 1980 ctttgcaaat atacgctcta agttagagcg tatgttatga tgatgaagga caaaatcctt 2040 cggctgttct tccttcaaaa tttgaagggc ttgatcaagg ttctgtgcat ttagaacctt 2100 ggcgtatgac tcgtttgcag tctgttggcc acctcttgca gaacgagcat cgacctgaaa 2160 ttcaccccat tcaatggtgt ctccatcctt gtcgacgtag gacttgacgt cggagctcga 2220 tttagctccc tgaatgttcg gatggaaatg tgctgatctt gttggggata ccaagtcgaa 2280 caatctgcta tttgtgcaga tgagtttccc ttcgaattga agcaggacgt ggagatgagg 2340 ctgcccatct tcgtgaagct ctctggctat ttttatgaac ttcttgttgg atgaagtttg 2400 taaggataat atctgttcaa gagcagcctc tttagttaac gagcactggg gatatgtgag 2460 gaaataattt ttggcagata ttctaaaacg tttgggcggt ggcattcttg taaatagaag 2520 gatgtcacca aatggttccg ctctaaaact ctatagcaat tggtgacatt ggtgtacaat 2580 atatactaga accctctata gaactctcaa tctcaatcac acacgttgcg gccatccgat 2640 ataatatt 2648 //