ID KC004126; SV 1; circular; genomic DNA; STD; VRL; 2648 BP. XX AC KC004126; XX DT 21-NOV-2012 (Rel. 114, Created) DT 23-JAN-2013 (Rel. 115, Last updated, Version 2) XX DE Macroptilium yellow spot virus isolate BR:Oaf11:11 segment DNA-A, complete DE sequence. XX KW . XX OS Macroptilium yellow spot virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2648 RX PUBMED; 23136367. RA Lima A.T., Sobrinho R.R., Gonzalez-Aguilera J., Rocha C.S., Silva S.J., RA Xavier C.A., Silva F.N., Duffy S., Zerbini F.M.; RT "Synonymous site variation due to recombination explains higher genetic RT variability in begomovirus populations infecting non-cultivated hosts"; RL J. Gen. Virol. 94(Pt 2):418-431(2013). XX RN [2] RP 1-2648 RA Lima A.T., Sobrinho R.R., Aguilera J.G., Rocha C.S., Silva S.J., RA Xavier C.A., Silva F.N., Duffy S., Zerbini F.M.; RT ; RL Submitted (24-OCT-2012) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, Minas Gerais 36570-000, Brazil XX DR MD5; a0a2df72d6efe11683f22ce310a6be8d. XX CC ##Assembly-Data-START## CC Assembly Method :: DNAMAN v. 4.0 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2648 FT /organism="Macroptilium yellow spot virus" FT /segment="DNA-A" FT /host="Phaseolus vulgaris" FT /isolate="BR:Oaf11:11" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="2011" FT /clone="RC84-1" FT /db_xref="taxon:1129034" FT CDS 222..977 FT /codon_start=1 FT /product="CP" FT /note="coat protein" FT /db_xref="GOA:H8ZQV4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:H8ZQV4" FT /protein_id="AFX60759.1" FT /translation="MVKRDAPWRHMAGTSKVSRNNNYSPRGGGGPKNNRASEWVNRPMY FT RKPRIYRMYRTPDVPRGCEGPCKVQSFEQRHDISHVGKVICMSDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYSSPMDFGQVFNMFDNEPSTATV FT KNDLRDRFQVMHRFHAKVTGGQYASNEQAIVRRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSILN" FT CDS complement(974..1372) FT /codon_start=1 FT /product="REN" FT /note="replication-enhancer protein" FT /db_xref="GOA:K7XDW3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:K7XDW3" FT /protein_id="AFX60760.1" FT /translation="MDSRTGELITAHQAESGVYIWEISNPLYFKINHLEDPLYTTTRIY FT HVQIRFNHNLRRALALHKAYLNFQVWTTSLRASGTTYLVRFKYLVMLYLDRIGVISLNN FT VIRAVRFATDKSYVNYVLENHEIKYKFY" FT CDS complement(1119..1508) FT /codon_start=1 FT /product="TRAP" FT /note="transactivating protein" FT /db_xref="GOA:K7X082" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:K7X082" FT /protein_id="AFX60762.1" FT /translation="MRNSSSSTPPSIKVQHRAAKRRAIRRRRIDIDCGCSIYVHINCRG FT HGFTHRGTHHCTSGREWRLYLGDIKSPLFQNQPPGGSTIHDNQDIPRPDQVQPQPQESI FT GSPQGISQFPSLDDIPESFWDDIFS" FT CDS complement(1459..2505) FT /codon_start=1 FT /product="REP" FT /note="replication-associated protein" FT /db_xref="GOA:K7WKC0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:K7WKC0" FT /protein_id="AFX60761.1" FT /translation="MPPPKRFRISAKNYFLTYPQCSLTKEAALEQILSLQTSSNKKFIK FT IARELHEDGQPHLHVLLQFEGKFICTNSRLFDLVSPTRSAHFHPNIQGAKSSSDVKSYV FT DKDGDTIEWGEFQVDARSARGGQQTANESYAKVLNAQNLEQALQILKEEQPKDYVLQHH FT NIRSNLERIFAKAPEPWAPPFHLSSFTNVPEEMQAWADDYFGRGAAARPERPISIIIEG FT DSRTGKTMWARALGSHNYLSGHLDFNSKVYSNDVQYNVIDDIAPQYLKLKHWKELIGAQ FT KDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKSFLDKEENASLRQWTIHNAQFVFLN FT SPLYQGST" FT CDS complement(2091..2348) FT /codon_start=1 FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:K7WMS7" FT /protein_id="AFX60763.1" FT /translation="MGSLISTSCFNLKGNSSAQIADCSTWYPQQGQHISIQTFRELNQA FT PTSSPTSTRMETPLNGENFRSMLVLQEVANRLQTSLTPRF" XX SQ Sequence 2648 BP; 684 A; 551 C; 617 G; 796 T; 0 other; accggatggc cgcgcgattt tttatgggcc ttttcttttg ggctcgttct tttggaccga 60 gtgtatttga attaaagtcg ttgtatttga attaaagtca gttattttag ttggtccaat 120 gattatgcgt ctgactagct tagatattca caacttggtc cccaagttgg tggctaacgg 180 gtatatatgt taagaataac tgactacttc tttaattcag aatggttaag cgggacgccc 240 catggcgcca catggcagga acctcaaagg tttcccgcaa taacaactat tcccctcgtg 300 gaggtggagg tccaaaaaac aacagggcct ctgaatgggt taataggccc atgtacagaa 360 agcccaggat atatcggatg tacagaaccc ccgatgtgcc tagggggtgt gaaggcccat 420 gtaaggtcca gtcatttgaa cagcgtcacg atatatccca tgttggtaag gttatatgta 480 tgtctgacgt gacaagaggt aatggtatta cccatcgtgt aggaaaacgt ttttgtgtta 540 agtctgtata tattctaggt aagatatgga tggacgagaa catcaagttg aagaatcaca 600 cgaacagtgt gatgttttgg ttggtcagag acagaagacc ctatagctct cctatggact 660 ttggccaagt gttcaacatg tttgacaacg agcccagtac tgcaacggtt aagaacgatc 720 ttcgtgatcg ttttcaagtc atgcatcgat tccatgccaa agtcactggt ggacagtatg 780 cgagcaacga gcaagcaatt gtcaggcgtt tttggaaggt caacaatcat gtcgtctaca 840 accatcaaga agcagggaaa tacgagaatc atacggagaa cgctttacta ttgtatatgg 900 catgtactca tgcctctaac cccgtgtatg caaccttaaa aattcggatc tatttttacg 960 attcgatact caattaataa aatttgtatt ttatttcatg attctccagt acataattta 1020 catatgattt gtccgttgca aatcgaacag ctctgattac attgttaagc gaaataacac 1080 ctattcgatc taagtacaac atgactaagt atttaaacct aactaaatat gtcgtcccag 1140 aagctctcag ggatgtcgtc cagacttgga aattgagata tgccttgtgg agagccaatg 1200 ctctcctgag gttgtggttg aacctgatct ggacgtggta tatcctggtt gtcgtgtata 1260 gtggatcctc caggtggttg attttgaaat aaaggggatt tgatatctcc cagatataga 1320 cgccactctc tgcctgatgt gcagtgatga gttcccctgt gcgtgaatcc atgtcctctg 1380 cagttgatat ggacgtatat ggagcacccg caatctatgt caattcgtct tctcctgatt 1440 gctctccttt tggccgctct atgttgaacc ttgatagagg ggggagttga ggaagacgaa 1500 ttgcgcattg tgtatcgtcc actgtctaag tgatgcgttt tcctctttgt cgaggaatga 1560 tttatagctg gcgccctcgc caggattgca aagcacaatg cttgggattc cacctttaat 1620 ttgaactggc ttcccgtatt tgcaatttga ttgccagtcc ttttgagcac ctatcaattc 1680 tttccagtgc tttaacttta gatattgcgg tgcgatgtca tctatcacgt tgtactgcac 1740 atcatttgaa tagacctttg aattgaaatc gaggtgacca ctcaagtaat tatgggaccc 1800 caatgcacgt gcccacatgg tcttgcccgt tcgagagtca ccctcgatga ttatactaat 1860 tggtctctcc ggccgcgcag cggcacctct cccaaaatag tcatctgccc aagcttgcat 1920 ctcctctggg acgttagtga acgaggagag gtgaaacgga ggagcccatg gctccggagc 1980 ctttgcaaag atacgctcta ggttagagcg tatgttatgg tgttgaagga catagtcttt 2040 aggttgttcc tccttcaata tttgaagggc ctgttcaagg ttctgtgcgt tcagaacctt 2100 ggcgtaagac tcgtttgcag tctgttggcc acctcttgca gaacgagcat cgacctgaaa 2160 ttctccccat tcaatggtgt ctccatcctt gtcgacgtag gacttgacgt cggagcttga 2220 tttagctccc tgaatgtttg gatggaaatg tgctgacctt gttggggata ccaagtcgaa 2280 caatctgcta tttgtgcaga tgaatttccc ttcaaattga agcaggacgt ggagatgagg 2340 ctgcccatct tcgtgaagct ctcttgctat tttgatgaac ttcttgttgg atgaagtttg 2400 taaggataat atctgttcaa gagcagcctc tttagttaac gagcactggg gatatgtgag 2460 gaaataattt ttggcagata ttctaaaacg tttgggcggt ggcattcttg taaatagaag 2520 gatgtcacca aatggttccg ctctaaaact ctatagcaat tggtgacatt ggtgtacaat 2580 atatactaga accctcaata gaactttcaa tctcaatcac ccacgtggcg gccatccgat 2640 ataatatt 2648 //