ID KC004112; SV 1; circular; genomic DNA; STD; VRL; 2650 BP. XX AC KC004112; XX DT 21-NOV-2012 (Rel. 114, Created) DT 23-JAN-2013 (Rel. 115, Last updated, Version 2) XX DE Macroptilium yellow spot virus isolate BR:Oaf23:11 segment DNA-A, complete DE sequence. XX KW . XX OS Macroptilium yellow spot virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2650 RX PUBMED; 23136367. RA Lima A.T., Sobrinho R.R., Gonzalez-Aguilera J., Rocha C.S., Silva S.J., RA Xavier C.A., Silva F.N., Duffy S., Zerbini F.M.; RT "Synonymous site variation due to recombination explains higher genetic RT variability in begomovirus populations infecting non-cultivated hosts"; RL J. Gen. Virol. 94(Pt 2):418-431(2013). XX RN [2] RP 1-2650 RA Lima A.T., Sobrinho R.R., Aguilera J.G., Rocha C.S., Silva S.J., RA Xavier C.A., Silva F.N., Duffy S., Zerbini F.M.; RT ; RL Submitted (24-OCT-2012) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, Minas Gerais 36570-000, Brazil XX DR MD5; 4ba73b5ca7a0ef4aa33733206ec4ad41. XX CC ##Assembly-Data-START## CC Assembly Method :: DNAMAN v. 4.0 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2650 FT /organism="Macroptilium yellow spot virus" FT /segment="DNA-A" FT /host="Macroptilium lathyroides" FT /isolate="BR:Oaf23:11" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="2011" FT /clone="RC62-1B" FT /db_xref="taxon:1129034" FT CDS 223..978 FT /codon_start=1 FT /product="CP" FT /note="coat protein" FT /db_xref="GOA:H8ZQV4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:H8ZQV4" FT /protein_id="AFX60689.1" FT /translation="MVKRDAPWRHMAGTSKVSRNNNYSPRGGGGPKNNRASEWVNRPMY FT RKPRIYRMYRTPDVPRGCEGPCKVQSFEQRHDISHVGKVICMSDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYSSPMDFGQVFNMFDNEPSTATV FT KNDLRDRFQVMHRFHAKVTGGQYASNEQAIVRRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSILN" FT CDS complement(975..1373) FT /codon_start=1 FT /product="REN" FT /note="replication-enhancer protein" FT /db_xref="GOA:K7XDR7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:K7XDR7" FT /protein_id="AFX60690.1" FT /translation="MDSRTGELITAHQAESGVYIWEISNPLYFKINHVEDPLYTTTRIY FT HVQIRFNHNLRRALALHKAYLNFQVWTTSLRASGTTYLVRFKYLVMLYLERIGVISLNN FT VIRAVRFATDKSYVNYVLENHEIKFKFY" FT CDS complement(1120..1509) FT /codon_start=1 FT /product="TRAP" FT /note="transactivating protein" FT /db_xref="GOA:K7X041" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:K7X041" FT /protein_id="AFX60692.1" FT /translation="MRNSSSSTPPSIKVQHRAAKKRAIRRRRIDIDCGCSIYVHINCRG FT HGFTHRGTHHCTSGREWRLYLGDIKSPLFQDQPRGGSTIHDNQDIPRPDQVQPQPQESI FT GSPQGISQFPSLDDIPESFWDDIFS" FT CDS complement(1460..2506) FT /codon_start=1 FT /product="REP" FT /note="replication-associated protein" FT /db_xref="GOA:K7WK66" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:K7WK66" FT /protein_id="AFX60691.1" FT /translation="MPLPKSFRINAKNYFLTYPQCSLTKEEALSQLLNLSVPTNKKFIK FT IARELHENGQPHLHVLIQFEGKFQCKNNRFFDLVSPTRSTHFHPNIQGAKSSSDVKSYV FT EKDGDTIDWGEFQVDGRSARGGCQTINDTYAKALNASSAEEALQIIKEEQPQHFFLQHH FT NLVANASRIFKKAPEPWVPPFHLSSFTNVPEEMQAWADDYFGRGAAARPERPISIIIEG FT DSRTGKTMWARALGSHNYLSGHLDFNSKVYSNDVQYNVIDDIAPQYLKLKHWKELIGAQ FT KDWQSNCKYGKPVQIKGGIPCIVLCNPGEGASYKSFLDKEENASLRQWTIHNAKFVFLN FT SPLYQGST" FT CDS complement(2092..2355) FT /codon_start=1 FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:H8ZQS3" FT /protein_id="AFX60693.1" FT /translation="MKMGSLISTSSSSSKGNSSARITDSSTWYPQPGQHISIRTFRELN FT QAPTSSPTSRRTETQSIGGNFRSTEEVLEEVARRLTTHMPRR" XX SQ Sequence 2650 BP; 676 A; 550 C; 615 G; 809 T; 0 other; accggatggc cgcgcgattt tttatgggcc ttttcttttg ggctcgttct tttggaccga 60 gtgtatttga attaaagtca ttgttatttg aattaaagtc agttatttta tttggtccaa 120 tgaatatgcg tctgactagc ttagataatg acaacttggt ccccaagttg gtggctaacg 180 ggtatatatg ttaagaataa ctgactactt ctttaattca gaatggttaa gcgggacgcc 240 ccatggcgcc acatggctgg aacctcaaag gtttcccgca ataacaacta ttctcctcgt 300 ggaggtggag gtccaaaaaa caacagggcc tctgaatggg ttaataggcc catgtacaga 360 aagcccagga tatatcggat gtacagaacc cccgatgtgc ctagggggtg tgaaggccca 420 tgtaaggttc agtcatttga acagcgtcac gatatatccc atgttggtaa ggttatatgc 480 atgtctgacg tgacaagagg taatggtatt acccatcgtg taggaaaacg tttttgtgtt 540 aagtctgtat atattctagg taagatatgg atggacgaga acatcaagtt gaagaatcac 600 acgaacagtg tgatgttttg gttggtcaga gaccggagac cctatagctc ccctatggac 660 tttggccaag tgttcaacat gtttgacaat gagcccagta ctgctacggt taagaacgat 720 cttcgtgatc gttttcaagt tatgcatcga ttccatgcca aagtcactgg tggacagtat 780 gcgagcaacg agcaagcaat tgtgaggcgt ttttggaagg tcaacaatca tgttgtctac 840 aaccaccaag aagcagggaa atacgagaat catacggaga acgctttact actgtatatg 900 gcatgtactc atgcctctaa ccccgtgtat gcaaccttaa aaattcggat ctatttttac 960 gattcgatac tcaattaata aaatttgaat tttatttcat gattctccag tacataattt 1020 acatatgatt tgtccgttgc aaatcgaaca gctctgatta cattgttaag cgaaataaca 1080 cctattcgtt ctaagtacaa catgactaag tatttaaacc taactaaata tgtcgtccca 1140 gaagctctca gggatgtcgt ccagacttgg aaattgagat atgccttgtg gagagccaat 1200 gctctcctga ggttgtggtt gaacctgatc tggacgtggt atatcctggt tgtcgtgtat 1260 agtggatcct ccacgtggtt gatcttgaaa taaaggggat ttgatatctc ccagatatag 1320 acgccactct ctgcctgatg tgcagtgatg agttcccctg tgcgtgaatc catgtcctct 1380 gcagttgata tggacgtata tggagcaccc gcaatctatg tcaattcgtc ttcgcctgat 1440 tgctctcttc ttggccgctc tatgttgaac cttgatagag gggggagttg aggaagacga 1500 atttcgcatt gtgtattgtc cactgtctaa gtgatgcgtt ttcctctttg tcgaggaatg 1560 atttatagct ggcaccctcg ccaggattgc aaagcacaat gcatgggatt ccacctttaa 1620 tttgaactgg cttcccgtat ttgcaatttg attgccagtc cttttgagca cctatcaatt 1680 ctttccagtg ctttaacttt agatattgcg gtgcgatgtc atctatcacg ttatactgca 1740 catcatttga atagaccttt gaattgaaat cgaggtgacc actcaagtaa ttatgggacc 1800 ccaatgcacg tgcccacatg gtcttgcccg ttcgagagtc accctcgatg attatactaa 1860 ttggtctctc cggccgcgca gcggcacctc tcccaaaata gtcatctgcc caagcttgca 1920 tctcctctgg gacgttagtg aacgaggaga ggtgaaacgg aggaacccac ggttctggag 1980 ccttcttgaa aatgcgagaa gcatttgcca ccaagttatg atgttggaga aagaagtgct 2040 gtggttgctc ctctttaatt atttgcagtg cttcttctgc agaagaagcg tttaacgcct 2100 tggcatatgt gtcgttaatc gtctggcaac ctcctctagc acttcttccg tcgacctgaa 2160 attcccccca atcgattgtg tctccgtcct tctcgacgta ggacttgacg tcggagcttg 2220 atttagctcc ctgaatgttc ggatggaaat gtgttgacct ggttggggat accaggtcga 2280 agaatctgtt attcttgcac tggaatttcc cttcgaactg gatgaggacg tggagatgag 2340 gctgcccatt ttcatgaagc tctctggcta ttttgatgaa tttcttatta gtgggaactg 2400 ataggtttaa taattgggac agtgcttcct cttttgtaag agagcactgt ggataagtaa 2460 ggaaataatt tttggcattt attctaaaag actttgggag tggcatattt tgtaaataag 2520 gcttggacac cgatcggggt ctctcaactt ctgtgctatg caattggtgt ctggtgtctt 2580 atttatacta gaaccctcaa tagaactttg gatctcaatc acccacgtgg cggccatccg 2640 atataatatt 2650 //