ID KC004093; SV 1; circular; genomic DNA; STD; VRL; 2629 BP. XX AC KC004093; XX DT 21-NOV-2012 (Rel. 114, Created) DT 23-JAN-2013 (Rel. 115, Last updated, Version 2) XX DE Macroptilium yellow spot virus isolate BR:Crb10:11 segment DNA-A, complete DE sequence. XX KW . XX OS Macroptilium yellow spot virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2629 RX PUBMED; 23136367. RA Lima A.T., Sobrinho R.R., Gonzalez-Aguilera J., Rocha C.S., Silva S.J., RA Xavier C.A., Silva F.N., Duffy S., Zerbini F.M.; RT "Synonymous site variation due to recombination explains higher genetic RT variability in begomovirus populations infecting non-cultivated hosts"; RL J. Gen. Virol. 94(Pt 2):418-431(2013). XX RN [2] RP 1-2629 RA Lima A.T., Sobrinho R.R., Aguilera J.G., Rocha C.S., Silva S.J., RA Xavier C.A., Silva F.N., Duffy S., Zerbini F.M.; RT ; RL Submitted (24-OCT-2012) to the INSDC. RL Dep. de Fitopatologia, Universidade Federal de Vicosa, Av. P.H. Rolfs, s/n, RL Vicosa, Minas Gerais 36570-000, Brazil XX DR MD5; 478453d11972e95765d8356016b53373. XX CC ##Assembly-Data-START## CC Assembly Method :: DNAMAN v. 4.0 CC Sequencing Technology :: Sanger dideoxy sequencing CC ##Assembly-Data-END## XX FH Key Location/Qualifiers FH FT source 1..2629 FT /organism="Macroptilium yellow spot virus" FT /segment="DNA-A" FT /host="Phaseolus vulgaris" FT /isolate="BR:Crb10:11" FT /mol_type="genomic DNA" FT /country="Brazil" FT /collection_date="2011" FT /clone="RC112" FT /db_xref="taxon:1129034" FT CDS 202..957 FT /codon_start=1 FT /product="CP" FT /note="coat protein" FT /db_xref="GOA:H8ZQU4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:H8ZQU4" FT /protein_id="AFX60594.1" FT /translation="MVKRDAPWRHMAGTSKVSRNNNYSPRGGGGPKNNRASEWVNRPMY FT RKPRIYRMYRTPDVPRGCEGPCKVQSFEQRHDISHVGKVICMSDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYSSPMDFGQVFNMFDNEPSTATI FT KNDLRDRFQVMHRFYAKVTGGQYASNEQAIVRRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSILN" FT CDS complement(954..1352) FT /codon_start=1 FT /product="REN" FT /note="replication-enhancer protein" FT /db_xref="GOA:K7XDI2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:K7XDI2" FT /protein_id="AFX60595.1" FT /translation="MDSRTGELITAHQAENGVYIWEISNPLYFKINHVEDPLHTTTRIY FT HVQIRFNHNLRRALALHKAYLNFQVWTTSLRASGTTYLVRFKYLVMLYLDRIGVISLNN FT VIRAVRYATDKSYVNDVLENHEIKFKFY" FT CDS complement(1099..1488) FT /codon_start=1 FT /product="TRAP" FT /note="transactivating protein" FT /db_xref="GOA:K7X005" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:K7X005" FT /protein_id="AFX60597.1" FT /translation="MRNSSSSTPPSIKVQHRAAKKRAIRRRRIDIDCGCSIYVHINCRG FT HGFTHRGTHHCTSGREWRLYLGDIKSPLFQDQPRGGSTTHDNQDIPRPDQVQPQPQESI FT GSPQGISQFPSLDDIPESFWDDIFS" FT CDS complement(1439..2485) FT /codon_start=1 FT /product="REP" FT /note="replication-associated protein" FT /db_xref="GOA:K7WJY1" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:K7WJY1" FT /protein_id="AFX60596.1" FT /translation="MPLPKSFRINAKNYFLTYPQCSLTKEEALSQLLNLSVPTNKKFIK FT IARELHENGQPHLHVLIQFEGKFQCKNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYV FT EKDGDTIDWGEFQVDGRSARGGCQTINDTYAKALNASSAEEALQIIKEEQPQHFFLQHH FT NLVANASRIFQKAPEPWVPPFHLSSFTNVPEEMQAWADDYFGRGAAARPERPISIIIEG FT DSRTGKTMWARALGSHNYLSGHLDFNSKVYSNDVQYNVIDDIAPQYLKLKHWKELIGAQ FT KDWQSNCKYGKPVQIKGGIPCIVLCNPGEGASYKSFLDKEENTSLRQWTIHNAQFVFLN FT SPLYQGST" FT CDS complement(2071..2334) FT /codon_start=1 FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:K7WMG7" FT /protein_id="AFX60598.1" FT /translation="MKMGSLISTSSSSSKGNSSARITDSSTWYPQPGQHISIRTFRELN FT QAPTSSPTSRRTETPSIGANFRSTEEVLEEVARRLTTHMPKR" XX SQ Sequence 2629 BP; 668 A; 543 C; 614 G; 804 T; 0 other; accggatggc cgcgcgattt tttatgggcc ttttcttttg ggctcgttct tttggaccga 60 gtgtatttga attaaagtca gttattttat ttggtccaat gaatatgcgt ctgactagct 120 tagataatga caacttggtc cccaagttgg tggctaacgg gtatatatgt taagaataac 180 tgactatttc tttaattcag aatggttaag cgggacgccc catggcgcca catggcagga 240 acctcaaagg tttcccgcaa taacaactat tctcctcgtg gaggtggagg tccaaaaaac 300 aacagggcct ctgaatgggt taataggccc atgtacagaa agcccaggat ctatcgtatg 360 tacagaaccc ccgatgtgcc tagagggtgt gaaggcccat gtaaggttca gtcgtttgaa 420 cagcgtcacg atatatccca tgttggtaag gttatatgta tgtctgacgt gacaagaggt 480 aatggtatta cccatcgtgt aggaaaacgt ttttgtgtta agtctgtata tattctaggt 540 aagatatgga tggacgagaa catcaagttg aagaatcaca cgaacagtgt gatgttttgg 600 ttggtcagag acagaagacc ctatagctct cccatggact ttggccaagt gttcaacatg 660 tttgacaatg agcccagtac tgctactatt aagaacgatc ttcgtgatcg ttttcaagtg 720 atgcatcgat tttatgccaa agtcactggt ggacagtatg cgagcaacga gcaagcaatt 780 gtcaggcgtt tttggaaggt caacaatcat gttgtctaca accaccaaga agcagggaaa 840 tacgagaatc atacggagaa cgccttacta ttgtatatgg catgtactca tgcctctaac 900 cccgtgtatg caactttaaa aattcggatc tatttttatg attcgatact caattaataa 960 aatttgaatt ttatttcatg attctccagt acatcattta catatgactt gtccgttgca 1020 taacgaacag ctctgattac attgttaagc gaaataacac ctattcggtc taagtacaac 1080 atgactaagt atttaaacct aactaaatat gtcgtcccag aagctctcag ggatgtcgtc 1140 cagacttgga aattgagata tgccttgtgg agagccaatg ctctcctgag gttgtggttg 1200 aacctgatct ggacgtggta tatcctggtt gtcgtgtgta gtggatcctc cacgtggttg 1260 atcttgaaat aaaggggatt tgatatctcc cagatataga cgccattctc tgcctgatgt 1320 gcagtgatga gttcccctgt gcgtgaatcc atgtcctctg cagttgatat ggacgtatat 1380 ggagcacccg caatctatgt caattcgtct tctccttatt gctctcttct tggccgctct 1440 atgttgaacc ttgatagagg ggggagttga ggaagacgaa ttgcgcattg tgtatcgtcc 1500 actgtctaag tgatgtgttt tcctctttgt cgaggaatga tttatagctg gcgccctcgc 1560 caggattgca aagcacaatg catgggattc cacctttaat ttgaactggc ttgccgtatt 1620 tgcaattcga ttgccagtcc ttttgagcac ctatcaattc tttccagtgc tttaacttta 1680 gatattgcgg tgcgatgtca tctatcacgt tgtactgcac atcatttgaa tagacctttg 1740 aattgaaatc gaggtgacca ctcaagtaat tatgggaccc caatgcacgt gcccacatgg 1800 tcttgcccgt tcgagagtca ccctcgatga ttatactaat tggtctctcc ggccgcgcag 1860 cggcacctct cccaaaatag tcatctgccc aagcttgcat ctcctctggg acgttagtga 1920 acgaggagag gtgaaacgga ggaacccacg gttctggagc cttctggaaa atgcgagaag 1980 catttgccac caagttatga tgttggagaa agaagtgctg tggttgctcc tctttaatta 2040 tttgcagtgc ttcttctgca gaagaagcgt ttaacgcttt ggcatatgtg tcgttaatcg 2100 tctggcaacc tcctctagca cttcttccgt cgacctgaaa ttcgccccaa tcgatggtgt 2160 ctccgtcctt ctcgacgtag gacttgacgt cggagcttga tttagctccc tgaatgttcg 2220 gatggaaatg tgctgacctg gttggggata ccaggtcgaa gaatctgtta ttcttgcact 2280 ggaatttccc ttcgaactgg atgaggacgt ggagatgagg ctgcccattt tcatgaagct 2340 ctctggctat tttgatgaat ttcttattag tgggaactga taggtttaat aattgggaca 2400 gtgcttcctc ttttgtaaga gagcactgtg gataagtaag gaaataattt ttggcattta 2460 ttctaaaaga ctttgggagt ggcatatttt gtaaataagg cttggacacc gatcggggtc 2520 tctcaacttc tttgctatgc aattggtgtc tggtgtctta tttatactag aaccttcaat 2580 agaactttgg atctcaatca cccacgtggc ggccatccga tataatatt 2629 //